RNA–Protein interactions for RNA: ENST00000264951.8

XRN1-201, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene XRN1, Length 10,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-201ENST00000264951 DDIASQ8IXT1 998 aa5.72□□□□□ -1.49
XRN1-201ENST00000264951 GPT2Q8TD30 523 aa5.72□□□□□ -1.49
XRN1-201ENST00000264951 S100ZQ8WXG8 99 aa5.72□□□□□ -1.49
XRN1-201ENST00000264951 DBNDD2Q9BQY9 259 aa5.72□□□□□ -1.49
XRN1-201ENST00000264951 RMND5AQ9H871 391 aa5.72□□□□□ -1.49
XRN1-201ENST00000264951 DMAP1Q9NPF5 467 aaPredicted RBP5.72□□□□□ -1.49
XRN1-201ENST00000264951 EDC4Q6P2E9 1401 aaKnown RBP5.72□□□□□ -1.49
XRN1-201ENST00000264951 LOC102724159A0A0B4J2E5 919 aa5.72□□□□□ -1.49
XRN1-201ENST00000264951 GOLGA8SH3BPF8 625 aa5.72□□□□□ -1.49
XRN1-201ENST00000264951 IGF2BP3O00425 579 aaKnown RBP eCLIP5.72□□□□□ -1.49
XRN1-201ENST00000264951 CALB2P22676 271 aa5.72□□□□□ -1.49
XRN1-201ENST00000264951 PDIA3P30101 505 aaKnown RBP5.72□□□□□ -1.49
XRN1-201ENST00000264951 SF3A3Q12874 501 aaKnown RBP eCLIP5.72□□□□□ -1.49
XRN1-201ENST00000264951 PWP2Q15269 919 aaKnown RBP5.72□□□□□ -1.49
XRN1-201ENST00000264951 TRAPPC3LQ5T215 181 aa5.72□□□□□ -1.49
XRN1-201ENST00000264951 RSBN1Q5VWQ0 802 aaPredicted RBP5.72□□□□□ -1.49
XRN1-201ENST00000264951 UGT3A1Q6NUS8 523 aa5.72□□□□□ -1.49
XRN1-201ENST00000264951 CCDC137Q6PK04 289 aaKnown RBP5.72□□□□□ -1.49
XRN1-201ENST00000264951 CYFIP1Q7L576 1253 aa5.72□□□□□ -1.49
XRN1-201ENST00000264951 TRAPPC11Q7Z392 1133 aa5.72□□□□□ -1.49
XRN1-201ENST00000264951 IFNL3Q8IZI9 196 aa5.72□□□□□ -1.49
XRN1-201ENST00000264951 GUF1Q8N442 669 aaKnown RBP5.72□□□□□ -1.49
XRN1-201ENST00000264951 SNIP1Q8TAD8 396 aaKnown RBP5.72□□□□□ -1.49
XRN1-201ENST00000264951 SPRTNQ9H040 489 aaPredicted RBP5.72□□□□□ -1.49
XRN1-201ENST00000264951 AKAP7Q9P0M2 348 aaPredicted RBP5.72□□□□□ -1.49
XRN1-201ENST00000264951 SLC9A2Q9UBY0 812 aa5.72□□□□□ -1.49
XRN1-201ENST00000264951 TPRKBQ9Y3C4 175 aa5.72□□□□□ -1.49
XRN1-201ENST00000264951 ABCC4O15439 1325 aa5.72□□□□□ -1.49
XRN1-201ENST00000264951 A0A087WXM4 84 aa5.72□□□□□ -1.49
XRN1-201ENST00000264951 SPDYE5A6NIY4 337 aa5.72□□□□□ -1.49
XRN1-201ENST00000264951 C3orf70A6NLC5 250 aaPredicted RBP5.72□□□□□ -1.49
XRN1-201ENST00000264951 SLC16A3O15427 465 aaKnown RBP5.72□□□□□ -1.49
XRN1-201ENST00000264951 TTLL1O95922 423 aa5.72□□□□□ -1.49
XRN1-201ENST00000264951 SNRPAP09012 282 aaKnown RBP5.72□□□□□ -1.49
XRN1-201ENST00000264951 DLGAP5Q15398 846 aa5.72□□□□□ -1.49
XRN1-201ENST00000264951 SPDYE7PQ495Y7 208 aa5.72□□□□□ -1.49
XRN1-201ENST00000264951 CACHD1Q5VU97 1274 aa5.72□□□□□ -1.49
XRN1-201ENST00000264951 CYFIP2Q96F07 1278 aa5.72□□□□□ -1.49
XRN1-201ENST00000264951 ZBED2Q9BTP6 218 aa5.72□□□□□ -1.49
XRN1-201ENST00000264951 BDH2Q9BUT1 245 aa5.72□□□□□ -1.49
XRN1-201ENST00000264951 RPAP3Q9H6T3 665 aaPredicted RBP5.72□□□□□ -1.49
XRN1-201ENST00000264951 ADAMTS1Q9UHI8 967 aa5.72□□□□□ -1.49
XRN1-201ENST00000264951 FIS1Q9Y3D6 152 aa5.72□□□□□ -1.49
XRN1-201ENST00000264951 PRAG1Q86YV5 1406 aa5.72□□□□□ -1.49
XRN1-201ENST00000264951 LSP1P33241 339 aa5.72□□□□□ -1.49
XRN1-201ENST00000264951 CENPCQ03188 943 aa5.72□□□□□ -1.49
XRN1-201ENST00000264951 MTA1Q13330 715 aa5.72□□□□□ -1.49
XRN1-201ENST00000264951 BARGINQ6ZT62 677 aa5.72□□□□□ -1.49
XRN1-201ENST00000264951 FASTKD5Q7L8L6 764 aaKnown RBP5.72□□□□□ -1.49
XRN1-201ENST00000264951 NLRP10Q86W26 655 aa5.72□□□□□ -1.49
XRN1-201ENST00000264951 STKLD1Q8NE28 680 aa5.72□□□□□ -1.49
XRN1-201ENST00000264951 DLG3Q92796 817 aa5.72□□□□□ -1.49
XRN1-201ENST00000264951 PDLIM2Q96JY6 352 aa5.72□□□□□ -1.49
XRN1-201ENST00000264951 DNAJC5Q9H3Z4 198 aa5.72□□□□□ -1.49
XRN1-201ENST00000264951 SPACA6W5XKT8 324 aa5.72□□□□□ -1.49
XRN1-201ENST00000264951 PLEKHG1Q9ULL1 1385 aa5.72□□□□□ -1.49
XRN1-201ENST00000264951 JAK2O60674 1132 aa5.72□□□□□ -1.49
XRN1-201ENST00000264951 NPR3P17342 541 aa5.72□□□□□ -1.49
XRN1-201ENST00000264951 HOXB8P17481 243 aaPredicted RBP5.72□□□□□ -1.49
XRN1-201ENST00000264951 SFNP31947 248 aa5.72□□□□□ -1.49
XRN1-201ENST00000264951 GMFBP60983 142 aa5.72□□□□□ -1.49
XRN1-201ENST00000264951 OLR1P78380 273 aa5.72□□□□□ -1.49
XRN1-201ENST00000264951 ITGADQ13349 1161 aa5.72□□□□□ -1.49
XRN1-201ENST00000264951 PDAP1Q13442 181 aaKnown RBP5.72□□□□□ -1.49
XRN1-201ENST00000264951 BTN2A1Q7KYR7 527 aa5.72□□□□□ -1.49
XRN1-201ENST00000264951 SZRD1Q7Z422 152 aa5.72□□□□□ -1.49
XRN1-201ENST00000264951 STARD8Q92502 1023 aa5.72□□□□□ -1.49
XRN1-201ENST00000264951 TMEM237Q96Q45 408 aa5.72□□□□□ -1.49
XRN1-201ENST00000264951 KLHL4Q9C0H6 718 aa5.72□□□□□ -1.49
XRN1-201ENST00000264951 SNX24Q9Y343 169 aa5.72□□□□□ -1.49
XRN1-201ENST00000264951 TEX14Q8IWB6 1497 aa5.72□□□□□ -1.49
XRN1-201ENST00000264951 hCG_2014768A0A024R1R8 64 aa5.72□□□□□ -1.49
XRN1-201ENST00000264951 TCP11X1B4DZS4 312 aa5.72□□□□□ -1.49
XRN1-201ENST00000264951 PALMO75781 387 aa5.72□□□□□ -1.49
XRN1-201ENST00000264951 OSBPP22059 807 aa5.72□□□□□ -1.49
XRN1-201ENST00000264951 PLA2G4AP47712 749 aa5.72□□□□□ -1.49
XRN1-201ENST00000264951 TFAMQ00059 246 aaKnown RBP5.72□□□□□ -1.49
XRN1-201ENST00000264951 HDLBPQ00341 1268 aaKnown RBP5.72□□□□□ -1.49
XRN1-201ENST00000264951 USH1GQ495M9 461 aa5.72□□□□□ -1.49
XRN1-201ENST00000264951 WASHC2DQ5SRD0 308 aa5.72□□□□□ -1.49
XRN1-201ENST00000264951 RC3H1Q5TC82 1133 aaKnown RBP5.72□□□□□ -1.49
XRN1-201ENST00000264951 CLEC17AQ6ZS10 378 aa5.72□□□□□ -1.49
XRN1-201ENST00000264951 PIK3C3Q8NEB9 887 aa5.72□□□□□ -1.49
XRN1-201ENST00000264951 SHCBP1Q8NEM2 672 aa5.72□□□□□ -1.49
XRN1-201ENST00000264951 ZNF473Q8WTR7 871 aaKnown RBP5.72□□□□□ -1.49
XRN1-201ENST00000264951 INPP5DQ92835 1189 aa5.72□□□□□ -1.49
XRN1-201ENST00000264951 FAM162AQ96A26 154 aa5.72□□□□□ -1.49
XRN1-201ENST00000264951 RNFT2Q96EX2 444 aa5.72□□□□□ -1.49
XRN1-201ENST00000264951 FBXO40Q9UH90 709 aa5.72□□□□□ -1.49
XRN1-201ENST00000264951 SORCS3Q9UPU3 1222 aa5.72□□□□□ -1.49
XRN1-201ENST00000264951 CCDC162PA2VCL2 907 aa5.72□□□□□ -1.49
XRN1-201ENST00000264951 LDOC1O95751 146 aaPredicted RBP5.72□□□□□ -1.49
XRN1-201ENST00000264951 MYL2P10916 166 aa5.72□□□□□ -1.49
XRN1-201ENST00000264951 PDIA2Q13087 525 aaKnown RBP5.72□□□□□ -1.49
XRN1-201ENST00000264951 GPS1Q13098 491 aa5.72□□□□□ -1.49
XRN1-201ENST00000264951 TSNQ15631 228 aaKnown RBP5.72□□□□□ -1.49
XRN1-201ENST00000264951 FBXO42Q6P3S6 717 aa5.72□□□□□ -1.49
XRN1-201ENST00000264951 CYP4F11Q9HBI6 524 aa5.72□□□□□ -1.49
XRN1-201ENST00000264951 COPRSQ9NQ92 184 aa5.72□□□□□ -1.49
XRN1-201ENST00000264951 AVENQ9NQS1 362 aaPredicted RBP5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms