RNA–Protein interactions for RNA: ENST00000264709.7

DNMT3A-201, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 9,501 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-201ENST00000264709 CAND2O75155 1236 aa12.31□□□□□ -0.44
DNMT3A-201ENST00000264709 PDE5AO76074 875 aa12.31□□□□□ -0.44
DNMT3A-201ENST00000264709 TMEM191BP0C7N4 346 aa12.31□□□□□ -0.44
DNMT3A-201ENST00000264709 COILP38432 576 aaPredicted RBP12.31□□□□□ -0.44
DNMT3A-201ENST00000264709 KBTBD12Q3ZCT8 623 aa12.31□□□□□ -0.44
DNMT3A-201ENST00000264709 CEP95Q96GE4 821 aa12.31□□□□□ -0.44
DNMT3A-201ENST00000264709 C2CD2Q9Y426 696 aa12.31□□□□□ -0.44
DNMT3A-201ENST00000264709 SNX3O60493 162 aa12.31□□□□□ -0.44
DNMT3A-201ENST00000264709 ARSEP51690 589 aa12.31□□□□□ -0.44
DNMT3A-201ENST00000264709 MAP3K10Q02779 954 aa12.31□□□□□ -0.44
DNMT3A-201ENST00000264709 MCL1Q07820 350 aa12.31□□□□□ -0.44
DNMT3A-201ENST00000264709 PHTF1Q9UMS5 762 aa12.31□□□□□ -0.44
DNMT3A-201ENST00000264709 RASSF9O75901 435 aa12.31□□□□□ -0.44
DNMT3A-201ENST00000264709 MAP3K7CLP57077 242 aa12.31□□□□□ -0.44
DNMT3A-201ENST00000264709 GALNT15Q8N3T1 639 aa12.31□□□□□ -0.44
DNMT3A-201ENST00000264709 FBXO25Q8TCJ0 367 aa12.31□□□□□ -0.44
DNMT3A-201ENST00000264709 EPS8L2Q9H6S3 715 aa12.31□□□□□ -0.44
DNMT3A-201ENST00000264709 CD44P16070 742 aaKnown RBP12.31□□□□□ -0.44
DNMT3A-201ENST00000264709 MAGEA4P43358 317 aa12.31□□□□□ -0.44
DNMT3A-201ENST00000264709 CYP4A11Q02928 519 aa12.31□□□□□ -0.44
DNMT3A-201ENST00000264709 RFX6Q8HWS3 928 aa12.31□□□□□ -0.44
DNMT3A-201ENST00000264709 OR2W6PQ8NHA6 318 aa12.31□□□□□ -0.44
DNMT3A-201ENST00000264709 CLMNQ96JQ2 1002 aa12.31□□□□□ -0.44
DNMT3A-201ENST00000264709 PRPSAP1Q14558 356 aa12.3□□□□□ -0.44
DNMT3A-201ENST00000264709 MARK2Q7KZI7 788 aaKnown RBP12.3□□□□□ -0.44
DNMT3A-201ENST00000264709 MRPL1Q9BYD6 325 aaKnown RBP12.3□□□□□ -0.44
DNMT3A-201ENST00000264709 CNTFP26441 200 aa12.3□□□□□ -0.44
DNMT3A-201ENST00000264709 GSTT1P30711 240 aa12.3□□□□□ -0.44
DNMT3A-201ENST00000264709 SNX5Q9Y5X3 404 aa12.3□□□□□ -0.44
DNMT3A-201ENST00000264709 TRIP13Q15645 432 aaPredicted RBP12.3□□□□□ -0.44
DNMT3A-201ENST00000264709 FAM47CQ5HY64 1035 aa12.3□□□□□ -0.44
DNMT3A-201ENST00000264709 SLC7A3Q8WY07 619 aa12.3□□□□□ -0.44
DNMT3A-201ENST00000264709 SENP7Q9BQF6 1050 aa12.3□□□□□ -0.44
DNMT3A-201ENST00000264709 GINM1Q9NU53 330 aa12.3□□□□□ -0.44
DNMT3A-201ENST00000264709 ARHGAP20Q9P2F6 1191 aa12.3□□□□□ -0.44
DNMT3A-201ENST00000264709 PALM3A6NDB9 673 aaPredicted RBP12.3□□□□□ -0.44
DNMT3A-201ENST00000264709 ECM2O94769 699 aaPredicted RBP12.3□□□□□ -0.44
DNMT3A-201ENST00000264709 PTDSS1P48651 473 aaKnown RBP12.3□□□□□ -0.44
DNMT3A-201ENST00000264709 RDH13Q8NBN7 331 aa12.3□□□□□ -0.44
DNMT3A-201ENST00000264709 CCT7Q99832 543 aa12.3□□□□□ -0.44
DNMT3A-201ENST00000264709 TMEM47Q9BQJ4 181 aa12.3□□□□□ -0.44
DNMT3A-201ENST00000264709 WDR35Q9P2L0 1181 aa12.3□□□□□ -0.44
DNMT3A-201ENST00000264709 SUN2Q9UH99 717 aa12.3□□□□□ -0.44
DNMT3A-201ENST00000264709 PCDHA6Q9UN73 950 aa12.3□□□□□ -0.44
DNMT3A-201ENST00000264709 PCDHA8Q9Y5H6 950 aa12.3□□□□□ -0.44
DNMT3A-201ENST00000264709 PLEKP08567 350 aaPredicted RBP12.3□□□□□ -0.44
DNMT3A-201ENST00000264709 PSMA2P25787 234 aa12.3□□□□□ -0.44
DNMT3A-201ENST00000264709 PIGHQ14442 188 aaPredicted RBP12.3□□□□□ -0.44
DNMT3A-201ENST00000264709 ZNF268Q14587 947 aaPredicted RBP12.3□□□□□ -0.44
DNMT3A-201ENST00000264709 CNKSR1Q969H4 720 aa12.3□□□□□ -0.44
DNMT3A-201ENST00000264709 BTBD10Q9BSF8 475 aa12.3□□□□□ -0.44
DNMT3A-201ENST00000264709 EYA4O95677 639 aa12.3□□□□□ -0.44
DNMT3A-201ENST00000264709 DACT3Q96B18 629 aaPredicted RBP12.3□□□□□ -0.44
DNMT3A-201ENST00000264709 MTMR8Q96EF0 704 aa12.3□□□□□ -0.44
DNMT3A-201ENST00000264709 INTS2Q9H0H0 1204 aaKnown RBP12.3□□□□□ -0.44
DNMT3A-201ENST00000264709 PICK1Q9NRD5 415 aa12.3□□□□□ -0.44
DNMT3A-201ENST00000264709 PRKCIP41743 596 aa12.3□□□□□ -0.44
DNMT3A-201ENST00000264709 HSPA2P54652 639 aa12.3□□□□□ -0.44
DNMT3A-201ENST00000264709 KDSRQ06136 332 aa12.3□□□□□ -0.44
DNMT3A-201ENST00000264709 INAQ16352 499 aa12.3□□□□□ -0.44
DNMT3A-201ENST00000264709 FAM102BQ5T8I3 360 aa12.3□□□□□ -0.44
DNMT3A-201ENST00000264709 MDM1Q8TC05 714 aa12.3□□□□□ -0.44
DNMT3A-201ENST00000264709 TAGLN3Q9UI15 199 aa12.3□□□□□ -0.44
DNMT3A-201ENST00000264709 B2RBV5 119 aa12.29□□□□□ -0.44
DNMT3A-201ENST00000264709 H0Y626 953 aa12.29□□□□□ -0.44
DNMT3A-201ENST00000264709 RTN3O95197 1032 aaPredicted RBP12.29□□□□□ -0.44
DNMT3A-201ENST00000264709 TRIM16O95361 564 aa12.29□□□□□ -0.44
DNMT3A-201ENST00000264709 CHEK2O96017 543 aa12.29□□□□□ -0.44
DNMT3A-201ENST00000264709 DEFA1P59665 94 aa12.29□□□□□ -0.44
DNMT3A-201ENST00000264709 DEFA3P59666 94 aa12.29□□□□□ -0.44
DNMT3A-201ENST00000264709 MECOMQ03112 1051 aa12.29□□□□□ -0.44
DNMT3A-201ENST00000264709 UGP2Q16851 508 aa12.29□□□□□ -0.44
DNMT3A-201ENST00000264709 DLG3Q92796 817 aa12.29□□□□□ -0.44
DNMT3A-201ENST00000264709 STN1Q9H668 368 aaKnown RBP12.29□□□□□ -0.44
DNMT3A-201ENST00000264709 SOX13Q9UN79 622 aa12.29□□□□□ -0.44
DNMT3A-201ENST00000264709 RNF103-CHMP3A0A140T963 221 aa12.29□□□□□ -0.44
DNMT3A-201ENST00000264709 LCA5LO95447 670 aa12.29□□□□□ -0.44
DNMT3A-201ENST00000264709 SNRPAP09012 282 aaKnown RBP12.29□□□□□ -0.44
DNMT3A-201ENST00000264709 FAM200BP0CF97 657 aa12.29□□□□□ -0.44
DNMT3A-201ENST00000264709 VAMP7P51809 220 aa12.29□□□□□ -0.44
DNMT3A-201ENST00000264709 EPHB1P54762 984 aa12.29□□□□□ -0.44
DNMT3A-201ENST00000264709 XKR9Q5GH70 373 aa12.29□□□□□ -0.44
DNMT3A-201ENST00000264709 SCG3Q8WXD2 468 aaKnown RBP12.29□□□□□ -0.44
DNMT3A-201ENST00000264709 TMEM109Q9BVC6 243 aa12.29□□□□□ -0.44
DNMT3A-201ENST00000264709 F8W8V4 182 aa12.29□□□□□ -0.44
DNMT3A-201ENST00000264709 ARHGEF9O43307 516 aa12.29□□□□□ -0.44
DNMT3A-201ENST00000264709 ILF2Q12905 390 aaKnown RBP12.29□□□□□ -0.44
DNMT3A-201ENST00000264709 GLG1Q92896 1179 aa12.29□□□□□ -0.44
DNMT3A-201ENST00000264709 PURBQ96QR8 312 aaKnown RBP12.29□□□□□ -0.44
DNMT3A-201ENST00000264709 DUSP10Q9Y6W6 482 aa12.29□□□□□ -0.44
DNMT3A-201ENST00000264709 WDR91A4D1P6 747 aa12.29□□□□□ -0.44
DNMT3A-201ENST00000264709 SERPINB1P30740 379 aa12.29□□□□□ -0.44
DNMT3A-201ENST00000264709 THOC5Q13769 683 aaKnown RBP12.29□□□□□ -0.44
DNMT3A-201ENST00000264709 SLFN13Q68D06 897 aa12.29□□□□□ -0.44
DNMT3A-201ENST00000264709 CALN1Q9BXU9 219 aa12.29□□□□□ -0.44
DNMT3A-201ENST00000264709 SLC12A4Q9UP95 1085 aa12.29□□□□□ -0.44
DNMT3A-201ENST00000264709 RBAK-RBAKDNI3L0D1 243 aa12.29□□□□□ -0.44
DNMT3A-201ENST00000264709 ARL4AP40617 200 aa12.29□□□□□ -0.44
DNMT3A-201ENST00000264709 CASP10Q92851 521 aa12.29□□□□□ -0.44
DNMT3A-201ENST00000264709 ZNF577Q9BSK1 485 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms