RNA–Protein interactions for RNA: ENST00000264010.8

CTCF-201, Transcript of CCCTC-binding factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTCF, Length 3,939 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-201ENST00000264010 MARK3P27448 753 aa17.38■□□□□ 0.37
CTCF-201ENST00000264010 RFC5P40937 340 aa17.38■□□□□ 0.37
CTCF-201ENST00000264010 LRRC57Q8N9N7 239 aa17.38■□□□□ 0.37
CTCF-201ENST00000264010 ZSWIM1Q9BR11 485 aa17.38■□□□□ 0.37
CTCF-201ENST00000264010 SUDS3Q9H7L9 328 aaPredicted RBP17.38■□□□□ 0.37
CTCF-201ENST00000264010 ATP8B3O60423 1300 aa17.37■□□□□ 0.37
CTCF-201ENST00000264010 INO80B-WBP1J3KQ70 363 aa17.37■□□□□ 0.37
CTCF-201ENST00000264010 PFDN1O60925 122 aa17.37■□□□□ 0.37
CTCF-201ENST00000264010 PHF2O75151 1096 aa17.37■□□□□ 0.37
CTCF-201ENST00000264010 OSBPP22059 807 aa17.37■□□□□ 0.37
CTCF-201ENST00000264010 EPC2Q52LR7 807 aa17.37■□□□□ 0.37
CTCF-201ENST00000264010 CEP128Q6ZU80 1094 aa17.37■□□□□ 0.37
CTCF-201ENST00000264010 ANO5Q75V66 913 aa17.37■□□□□ 0.37
CTCF-201ENST00000264010 PSPC1Q8WXF1 523 aaKnown RBP17.37■□□□□ 0.37
CTCF-201ENST00000264010 INO80BQ9C086 356 aaPredicted RBP17.37■□□□□ 0.37
CTCF-201ENST00000264010 TAS2R14Q9NYV8 317 aa17.37■□□□□ 0.37
CTCF-201ENST00000264010 RIPK3Q9Y572 518 aa17.37■□□□□ 0.37
CTCF-201ENST00000264010 SCINQ9Y6U3 715 aa17.37■□□□□ 0.37
CTCF-201ENST00000264010 LRRC37AA6NMS7 1700 aa17.37■□□□□ 0.37
CTCF-201ENST00000264010 CAND2O75155 1236 aa17.37■□□□□ 0.37
CTCF-201ENST00000264010 LACTBP83111 547 aaPredicted RBP17.37■□□□□ 0.37
CTCF-201ENST00000264010 TFAMQ00059 246 aaKnown RBP17.37■□□□□ 0.37
CTCF-201ENST00000264010 SNX1Q13596 522 aa17.37■□□□□ 0.37
CTCF-201ENST00000264010 SLMAPQ14BN4 828 aa17.37■□□□□ 0.37
CTCF-201ENST00000264010 MAPK6Q16659 721 aa17.37■□□□□ 0.37
CTCF-201ENST00000264010 ACAD10Q6JQN1 1059 aa17.37■□□□□ 0.37
CTCF-201ENST00000264010 SLC47A2Q86VL8 602 aa17.37■□□□□ 0.37
CTCF-201ENST00000264010 SEPT1Q8WYJ6 367 aa17.37■□□□□ 0.37
CTCF-201ENST00000264010 KAT5Q92993 513 aa17.37■□□□□ 0.37
CTCF-201ENST00000264010 BORCS6Q96GS4 357 aa17.37■□□□□ 0.37
CTCF-201ENST00000264010 CYP39A1Q9NYL5 469 aa17.37■□□□□ 0.37
CTCF-201ENST00000264010 CHORDC1Q9UHD1 332 aaPredicted RBP17.37■□□□□ 0.37
CTCF-201ENST00000264010 ADCY8P40145 1251 aa17.37■□□□□ 0.37
CTCF-201ENST00000264010 EFNA5P52803 228 aa17.37■□□□□ 0.37
CTCF-201ENST00000264010 ERVK-9P63128 1117 aa17.37■□□□□ 0.37
CTCF-201ENST00000264010 CCDC137Q6PK04 289 aaKnown RBP17.37■□□□□ 0.37
CTCF-201ENST00000264010 CATSPERGQ6ZRH7 1159 aa17.37■□□□□ 0.37
CTCF-201ENST00000264010 SH2D3CQ8N5H7 860 aa17.37■□□□□ 0.37
CTCF-201ENST00000264010 EIF1ADQ8N9N8 165 aaKnown RBP17.37■□□□□ 0.37
CTCF-201ENST00000264010 TSEN2Q8NCE0 465 aaKnown RBP17.37■□□□□ 0.37
CTCF-201ENST00000264010 SCFD2Q8WU76 684 aa17.37■□□□□ 0.37
CTCF-201ENST00000264010 ERP44Q9BS26 406 aa17.37■□□□□ 0.37
CTCF-201ENST00000264010 MRPL4Q9BYD3 311 aaKnown RBP17.37■□□□□ 0.37
CTCF-201ENST00000264010 FAM153BP0C7A2 387 aa17.36■□□□□ 0.37
CTCF-201ENST00000264010 FAM153CQ494X1 144 aa17.36■□□□□ 0.37
CTCF-201ENST00000264010 DNERQ8NFT8 737 aa17.36■□□□□ 0.37
CTCF-201ENST00000264010 HES6Q96HZ4 224 aa17.36■□□□□ 0.37
CTCF-201ENST00000264010 C11orf70Q9BRQ4 267 aa17.36■□□□□ 0.37
CTCF-201ENST00000264010 HOMER3Q9NSC5 361 aa17.36■□□□□ 0.37
CTCF-201ENST00000264010 FAM153AQ9UHL3 310 aa17.36■□□□□ 0.37
CTCF-201ENST00000264010 NOVA2Q9UNW9 492 aaKnown RBP17.36■□□□□ 0.37
CTCF-201ENST00000264010 PPP1R37O75864 691 aa17.36■□□□□ 0.37
CTCF-201ENST00000264010 ATP5DP30049 168 aa17.36■□□□□ 0.37
CTCF-201ENST00000264010 GNA15P30679 374 aa17.36■□□□□ 0.37
CTCF-201ENST00000264010 ARL8AQ96BM9 186 aa17.36■□□□□ 0.37
CTCF-201ENST00000264010 TARS2Q9BW92 718 aaKnown RBP17.36■□□□□ 0.37
CTCF-201ENST00000264010 NFASCO94856 1347 aa17.36■□□□□ 0.37
CTCF-201ENST00000264010 ATP2A1O14983 1001 aa17.36■□□□□ 0.37
CTCF-201ENST00000264010 ATF2P15336 505 aa17.36■□□□□ 0.37
CTCF-201ENST00000264010 TMEM132BQ14DG7 1078 aa17.36■□□□□ 0.37
CTCF-201ENST00000264010 R3HDM1Q15032 1099 aaKnown RBP17.36■□□□□ 0.37
CTCF-201ENST00000264010 NOP9Q86U38 636 aaKnown RBP17.36■□□□□ 0.37
CTCF-201ENST00000264010 ZNF677Q86XU0 584 aa17.36■□□□□ 0.37
CTCF-201ENST00000264010 LMNTD2Q8IXW0 634 aa17.36■□□□□ 0.37
CTCF-201ENST00000264010 UHMK1Q8TAS1 419 aaKnown RBP17.36■□□□□ 0.37
CTCF-201ENST00000264010 OTUD5Q96G74 571 aa17.36■□□□□ 0.37
CTCF-201ENST00000264010 GOLGB1Q14789 3259 aaKnown RBP17.35■□□□□ 0.37
CTCF-201ENST00000264010 NAMPTP43490 491 aa17.35■□□□□ 0.37
CTCF-201ENST00000264010 AP3M2P53677 418 aa17.35■□□□□ 0.37
CTCF-201ENST00000264010 JAMLQ86YT9 394 aa17.35■□□□□ 0.37
CTCF-201ENST00000264010 PASD1Q8IV76 773 aa17.35■□□□□ 0.37
CTCF-201ENST00000264010 FAM71AQ8IYT1 594 aa17.35■□□□□ 0.37
CTCF-201ENST00000264010 ANKRD36BP1Q96IX9 119 aa17.35■□□□□ 0.37
CTCF-201ENST00000264010 TRIM4Q9C037 500 aa17.35■□□□□ 0.37
CTCF-201ENST00000264010 FZD1Q9UP38 647 aa17.35■□□□□ 0.37
CTCF-201ENST00000264010 POLR2BP30876 1174 aaKnown RBP17.35■□□□□ 0.37
CTCF-201ENST00000264010 VPS41P49754 854 aa17.35■□□□□ 0.37
CTCF-201ENST00000264010 IRAK1P51617 712 aa17.35■□□□□ 0.37
CTCF-201ENST00000264010 GPC3P51654 580 aa17.35■□□□□ 0.37
CTCF-201ENST00000264010 MAP3K10Q02779 954 aa17.35■□□□□ 0.37
CTCF-201ENST00000264010 TAOK1Q7L7X3 1001 aa17.35■□□□□ 0.37
CTCF-201ENST00000264010 DPH6Q7L8W6 267 aa17.35■□□□□ 0.37
CTCF-201ENST00000264010 CCDC60Q8IWA6 550 aaPredicted RBP17.35■□□□□ 0.37
CTCF-201ENST00000264010 EPS8L1Q8TE68 723 aa17.35■□□□□ 0.37
CTCF-201ENST00000264010 NSRP1Q9H0G5 558 aaKnown RBP17.35■□□□□ 0.37
CTCF-201ENST00000264010 SAMD15Q9P1V8 674 aa17.35■□□□□ 0.37
CTCF-201ENST00000264010 AGTPBP1Q9UPW5 1226 aa17.35■□□□□ 0.37
CTCF-201ENST00000264010 IVNS1ABPQ9Y6Y0 642 aa17.35■□□□□ 0.37
CTCF-201ENST00000264010 CD58P19256 250 aa17.35■□□□□ 0.37
CTCF-201ENST00000264010 HSD17B3P37058 310 aa17.35■□□□□ 0.37
CTCF-201ENST00000264010 HSPA9P38646 679 aaKnown RBP17.35■□□□□ 0.37
CTCF-201ENST00000264010 SPATS2Q86XZ4 545 aaKnown RBP17.35■□□□□ 0.37
CTCF-201ENST00000264010 BBOF1Q8ND07 529 aa17.35■□□□□ 0.37
CTCF-201ENST00000264010 DNAI2Q9GZS0 605 aa17.35■□□□□ 0.37
CTCF-201ENST00000264010 C2orf40Q9H1Z8 148 aa17.35■□□□□ 0.37
CTCF-201ENST00000264010 EGFRP00533 1210 aa17.34■□□□□ 0.37
CTCF-201ENST00000264010 RASIP1Q5U651 963 aa17.34■□□□□ 0.37
CTCF-201ENST00000264010 RNF217Q8TC41 542 aa17.34■□□□□ 0.37
CTCF-201ENST00000264010 SHC3Q92529 594 aa17.34■□□□□ 0.37
CTCF-201ENST00000264010 TATDN2Q93075 761 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms