RNA–Protein interactions for RNA: ENST00000261707.7

SLC6A4-201, Transcript of solute carrier family 6 member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A4, Length 6,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4-201ENST00000261707 ASPRV1Q53RT3 343 aa11.3□□□□□ -0.6
SLC6A4-201ENST00000261707 RSBN1Q5VWQ0 802 aaPredicted RBP11.3□□□□□ -0.6
SLC6A4-201ENST00000261707 CCDC60Q8IWA6 550 aaPredicted RBP11.3□□□□□ -0.6
SLC6A4-201ENST00000261707 ST13P5Q8NFI4 369 aaPredicted RBP11.3□□□□□ -0.6
SLC6A4-201ENST00000261707 VPS50Q96JG6 964 aa11.3□□□□□ -0.6
SLC6A4-201ENST00000261707 RPF1Q9H9Y2 349 aaKnown RBP11.3□□□□□ -0.6
SLC6A4-201ENST00000261707 TRPC7Q9HCX4 862 aa11.3□□□□□ -0.6
SLC6A4-201ENST00000261707 SUGT1Q9Y2Z0 365 aa11.3□□□□□ -0.6
SLC6A4-201ENST00000261707 PFASO15067 1338 aa11.3□□□□□ -0.6
SLC6A4-201ENST00000261707 ASXL2Q76L83 1435 aa11.3□□□□□ -0.6
SLC6A4-201ENST00000261707 USP17L3A6NCW0 530 aa11.3□□□□□ -0.6
SLC6A4-201ENST00000261707 USP17L4A6NCW7 530 aa11.3□□□□□ -0.6
SLC6A4-201ENST00000261707 ABCD1P33897 745 aa11.3□□□□□ -0.6
SLC6A4-201ENST00000261707 SMAD1Q15797 465 aaKnown RBP11.3□□□□□ -0.6
SLC6A4-201ENST00000261707 P3H1Q32P28 736 aa11.3□□□□□ -0.6
SLC6A4-201ENST00000261707 USP17L1Q7RTZ2 530 aa11.3□□□□□ -0.6
SLC6A4-201ENST00000261707 HAUS6Q7Z4H7 955 aa11.3□□□□□ -0.6
SLC6A4-201ENST00000261707 RHOT1Q8IXI2 618 aa11.3□□□□□ -0.6
SLC6A4-201ENST00000261707 MARCH10Q8NA82 808 aaPredicted RBP11.3□□□□□ -0.6
SLC6A4-201ENST00000261707 PIGSQ96S52 555 aa11.3□□□□□ -0.6
SLC6A4-201ENST00000261707 DDX18Q9NVP1 670 aaKnown RBP11.3□□□□□ -0.6
SLC6A4-201ENST00000261707 CDYLQ9Y232 598 aa11.3□□□□□ -0.6
SLC6A4-201ENST00000261707 ADGRA3Q8IWK6 1321 aa11.3□□□□□ -0.6
SLC6A4-201ENST00000261707 SYNDIG1LA6NDD5 238 aa11.3□□□□□ -0.6
SLC6A4-201ENST00000261707 CALB1P05937 261 aa11.3□□□□□ -0.6
SLC6A4-201ENST00000261707 GHRP10912 638 aa11.3□□□□□ -0.6
SLC6A4-201ENST00000261707 SOX6P35712 828 aa11.3□□□□□ -0.6
SLC6A4-201ENST00000261707 LPCAT2Q7L5N7 544 aa11.3□□□□□ -0.6
SLC6A4-201ENST00000261707 RNF135Q8IUD6 432 aa11.3□□□□□ -0.6
SLC6A4-201ENST00000261707 HS6ST3Q8IZP7 471 aa11.3□□□□□ -0.6
SLC6A4-201ENST00000261707 CNDP1Q96KN2 507 aa11.3□□□□□ -0.6
SLC6A4-201ENST00000261707 GJB4Q9NTQ9 266 aa11.3□□□□□ -0.6
SLC6A4-201ENST00000261707 NR3C1P04150 777 aa11.3□□□□□ -0.6
SLC6A4-201ENST00000261707 C4BPBP20851 252 aa11.3□□□□□ -0.6
SLC6A4-201ENST00000261707 TRADDQ15628 312 aa11.3□□□□□ -0.6
SLC6A4-201ENST00000261707 IYDQ6PHW0 289 aa11.3□□□□□ -0.6
SLC6A4-201ENST00000261707 LRRC39Q96DD0 335 aa11.3□□□□□ -0.6
SLC6A4-201ENST00000261707 LRRC4Q9HBW1 653 aa11.3□□□□□ -0.6
SLC6A4-201ENST00000261707 PHTF1Q9UMS5 762 aa11.3□□□□□ -0.6
SLC6A4-201ENST00000261707 TOPBP1Q92547 1522 aa11.3□□□□□ -0.6
SLC6A4-201ENST00000261707 DGKIO75912 1065 aa11.3□□□□□ -0.6
SLC6A4-201ENST00000261707 TTLL1O95922 423 aa11.3□□□□□ -0.6
SLC6A4-201ENST00000261707 PPARGP37231 505 aaPredicted RBP11.3□□□□□ -0.6
SLC6A4-201ENST00000261707 COPAP53621 1224 aa11.3□□□□□ -0.6
SLC6A4-201ENST00000261707 DRAP1Q14919 205 aaPredicted RBP11.3□□□□□ -0.6
SLC6A4-201ENST00000261707 ARL13BQ3SXY8 428 aa11.3□□□□□ -0.6
SLC6A4-201ENST00000261707 COL23A1Q86Y22 540 aaPredicted RBP11.3□□□□□ -0.6
SLC6A4-201ENST00000261707 SCN4BQ8IWT1 228 aa11.3□□□□□ -0.6
SLC6A4-201ENST00000261707 ENGASEQ8NFI3 743 aa11.3□□□□□ -0.6
SLC6A4-201ENST00000261707 SH3KBP1Q96B97 665 aa11.3□□□□□ -0.6
SLC6A4-201ENST00000261707 RBM15Q96T37 977 aaKnown RBP eCLIP11.3□□□□□ -0.6
SLC6A4-201ENST00000261707 MMP19Q99542 508 aa11.3□□□□□ -0.6
SLC6A4-201ENST00000261707 ATAD3AQ9NVI7 634 aa11.3□□□□□ -0.6
SLC6A4-201ENST00000261707 ITSN2Q9NZM3 1697 aa11.3□□□□□ -0.6
SLC6A4-201ENST00000261707 TBKBP1A7MCY6 615 aa11.3□□□□□ -0.6
SLC6A4-201ENST00000261707 ALDH1A1P00352 501 aa11.3□□□□□ -0.6
SLC6A4-201ENST00000261707 GSNP06396 782 aa11.3□□□□□ -0.6
SLC6A4-201ENST00000261707 ADORA1P30542 326 aa11.3□□□□□ -0.6
SLC6A4-201ENST00000261707 OTUD4Q01804 1114 aaKnown RBP11.3□□□□□ -0.6
SLC6A4-201ENST00000261707 DCAF4L1Q3SXM0 396 aa11.3□□□□□ -0.6
SLC6A4-201ENST00000261707 NAALADL2Q58DX5 795 aa11.3□□□□□ -0.6
SLC6A4-201ENST00000261707 ARMCX4Q5H9R4 360 aa11.3□□□□□ -0.6
SLC6A4-201ENST00000261707 BTBD8Q5XKL5 378 aa11.3□□□□□ -0.6
SLC6A4-201ENST00000261707 SCUBE1Q8IWY4 988 aa11.3□□□□□ -0.6
SLC6A4-201ENST00000261707 RBBP8NLQ8NC74 664 aaPredicted RBP11.3□□□□□ -0.6
SLC6A4-201ENST00000261707 FSD1LQ9BXM9 530 aa11.3□□□□□ -0.6
SLC6A4-201ENST00000261707 PPCSQ9HAB8 311 aa11.3□□□□□ -0.6
SLC6A4-201ENST00000261707 EDC4Q6P2E9 1401 aaKnown RBP11.29□□□□□ -0.6
SLC6A4-201ENST00000261707 KCNA2P16389 499 aa11.29□□□□□ -0.6
SLC6A4-201ENST00000261707 ATP4AP20648 1035 aa11.29□□□□□ -0.6
SLC6A4-201ENST00000261707 PDAP1Q13442 181 aaKnown RBP11.29□□□□□ -0.6
SLC6A4-201ENST00000261707 ATXN7L3BQ96GX2 97 aa11.29□□□□□ -0.6
SLC6A4-201ENST00000261707 MXD3Q9BW11 206 aa11.29□□□□□ -0.6
SLC6A4-201ENST00000261707 WDR11Q9BZH6 1224 aa11.29□□□□□ -0.6
SLC6A4-201ENST00000261707 INTS2Q9H0H0 1204 aaKnown RBP11.29□□□□□ -0.6
SLC6A4-201ENST00000261707 NOL6Q9H6R4 1146 aaKnown RBP11.29□□□□□ -0.6
SLC6A4-201ENST00000261707 L2HGDHQ9H9P8 463 aa11.29□□□□□ -0.6
SLC6A4-201ENST00000261707 NGRNQ9NPE2 291 aaKnown RBP11.29□□□□□ -0.6
SLC6A4-201ENST00000261707 CCDC78A2IDD5 438 aa11.29□□□□□ -0.6
SLC6A4-201ENST00000261707 SMAPO00193 183 aa11.29□□□□□ -0.6
SLC6A4-201ENST00000261707 MMP10P09238 476 aa11.29□□□□□ -0.6
SLC6A4-201ENST00000261707 RAD9BQ6WBX8 426 aa11.29□□□□□ -0.6
SLC6A4-201ENST00000261707 WDR60Q8WVS4 1066 aa11.29□□□□□ -0.6
SLC6A4-201ENST00000261707 ZKSCAN4Q969J2 545 aaPredicted RBP11.29□□□□□ -0.6
SLC6A4-201ENST00000261707 ULK4Q96C45 1275 aa11.29□□□□□ -0.6
SLC6A4-201ENST00000261707 TMBIM4Q9HC24 238 aa11.29□□□□□ -0.6
SLC6A4-201ENST00000261707 MPP6Q9NZW5 540 aa11.29□□□□□ -0.6
SLC6A4-201ENST00000261707 AP3B1O00203 1094 aa11.29□□□□□ -0.6
SLC6A4-201ENST00000261707 O00370 1275 aa11.29□□□□□ -0.6
SLC6A4-201ENST00000261707 FOXN1O15353 648 aa11.29□□□□□ -0.6
SLC6A4-201ENST00000261707 KRT16P08779 473 aa11.29□□□□□ -0.6
SLC6A4-201ENST00000261707 ST8SIA6P61647 398 aa11.29□□□□□ -0.6
SLC6A4-201ENST00000261707 ARMC6Q6NXE6 501 aa11.29□□□□□ -0.6
SLC6A4-201ENST00000261707 BARGINQ6ZT62 677 aa11.29□□□□□ -0.6
SLC6A4-201ENST00000261707 RIBC1Q8N443 379 aaPredicted RBP11.29□□□□□ -0.6
SLC6A4-201ENST00000261707 OTUD5Q96G74 571 aa11.29□□□□□ -0.6
SLC6A4-201ENST00000261707 C11orf70Q9BRQ4 267 aa11.29□□□□□ -0.6
SLC6A4-201ENST00000261707 GINS4Q9BRT9 223 aa11.29□□□□□ -0.6
SLC6A4-201ENST00000261707 PAIP1Q9H074 479 aaKnown RBP11.29□□□□□ -0.6
SLC6A4-201ENST00000261707 KLHL31Q9H511 634 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 721 ms