RNA–Protein interactions for RNA: ENST00000260327.8

CTDSPL2-201, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 6,828 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-201ENST00000260327 ITIH4Q14624 930 aa10.28□□□□□ -0.76
CTDSPL2-201ENST00000260327 GRAPLQ8TC17 118 aaPredicted RBP10.28□□□□□ -0.76
CTDSPL2-201ENST00000260327 CASP10Q92851 521 aa10.28□□□□□ -0.76
CTDSPL2-201ENST00000260327 DHX36Q9H2U1 1008 aaKnown RBP10.28□□□□□ -0.76
CTDSPL2-201ENST00000260327 ABCB11O95342 1321 aa10.28□□□□□ -0.76
CTDSPL2-201ENST00000260327 TLR3O15455 904 aaKnown RBP10.28□□□□□ -0.76
CTDSPL2-201ENST00000260327 KCTD21Q4G0X4 260 aa10.28□□□□□ -0.76
CTDSPL2-201ENST00000260327 FAM160B1Q5W0V3 765 aa10.28□□□□□ -0.76
CTDSPL2-201ENST00000260327 NUP93Q8N1F7 819 aa10.28□□□□□ -0.76
CTDSPL2-201ENST00000260327 MIEF2Q96C03 454 aa10.28□□□□□ -0.76
CTDSPL2-201ENST00000260327 MPP4Q96JB8 637 aa10.28□□□□□ -0.76
CTDSPL2-201ENST00000260327 EIF2AK1Q9BQI3 630 aaKnown RBP10.28□□□□□ -0.76
CTDSPL2-201ENST00000260327 SH2D3AQ9BRG2 576 aa10.28□□□□□ -0.76
CTDSPL2-201ENST00000260327 BEGAINQ9BUH8 593 aa10.28□□□□□ -0.76
CTDSPL2-201ENST00000260327 KDM4CQ9H3R0 1056 aa10.28□□□□□ -0.76
CTDSPL2-201ENST00000260327 AS3MTQ9HBK9 375 aa10.28□□□□□ -0.76
CTDSPL2-201ENST00000260327 OLA1Q9NTK5 396 aaKnown RBP10.28□□□□□ -0.76
CTDSPL2-201ENST00000260327 PHTF1Q9UMS5 762 aa10.28□□□□□ -0.76
CTDSPL2-201ENST00000260327 HNRNPCL2B2RXH8 293 aa10.28□□□□□ -0.76
CTDSPL2-201ENST00000260327 ORC4O43929 436 aa10.28□□□□□ -0.76
CTDSPL2-201ENST00000260327 MRPL28Q13084 256 aaKnown RBP10.28□□□□□ -0.76
CTDSPL2-201ENST00000260327 QRICH1Q2TAL8 776 aa10.28□□□□□ -0.76
CTDSPL2-201ENST00000260327 C1orf228Q6PIY5 440 aa10.28□□□□□ -0.76
CTDSPL2-201ENST00000260327 FLCNQ8NFG4 579 aa10.28□□□□□ -0.76
CTDSPL2-201ENST00000260327 PSPC1Q8WXF1 523 aaKnown RBP10.28□□□□□ -0.76
CTDSPL2-201ENST00000260327 METTL5Q9NRN9 209 aaKnown RBP10.28□□□□□ -0.76
CTDSPL2-201ENST00000260327 DDX18Q9NVP1 670 aaKnown RBP10.28□□□□□ -0.76
CTDSPL2-201ENST00000260327 TMA7Q9Y2S6 64 aaKnown RBP10.28□□□□□ -0.76
CTDSPL2-201ENST00000260327 CAPN6Q9Y6Q1 641 aa10.28□□□□□ -0.76
CTDSPL2-201ENST00000260327 ADGRB3O60242 1522 aa10.28□□□□□ -0.76
CTDSPL2-201ENST00000260327 GGPS1O95749 300 aa10.27□□□□□ -0.76
CTDSPL2-201ENST00000260327 RFX1P22670 979 aa10.27□□□□□ -0.76
CTDSPL2-201ENST00000260327 PBXIP1Q96AQ6 731 aa10.27□□□□□ -0.76
CTDSPL2-201ENST00000260327 ADGRL3Q9HAR2 1447 aa10.27□□□□□ -0.76
CTDSPL2-201ENST00000260327 NAB2Q15742 525 aa10.27□□□□□ -0.76
CTDSPL2-201ENST00000260327 KRT39Q6A163 491 aa10.27□□□□□ -0.76
CTDSPL2-201ENST00000260327 IZUMO2Q6UXV1 221 aa10.27□□□□□ -0.76
CTDSPL2-201ENST00000260327 ATL2Q8NHH9 583 aa10.27□□□□□ -0.76
CTDSPL2-201ENST00000260327 UNC45AQ9H3U1 944 aa10.27□□□□□ -0.76
CTDSPL2-201ENST00000260327 SENP1Q9P0U3 644 aa10.27□□□□□ -0.76
CTDSPL2-201ENST00000260327 DMGDHQ9UI17 866 aaKnown RBP10.27□□□□□ -0.76
CTDSPL2-201ENST00000260327 C15orf41Q9Y2V0 281 aa10.27□□□□□ -0.76
CTDSPL2-201ENST00000260327 KCNMA1Q12791 1236 aa10.27□□□□□ -0.77
CTDSPL2-201ENST00000260327 STX3Q13277 289 aa10.27□□□□□ -0.77
CTDSPL2-201ENST00000260327 ALCAMQ13740 583 aa10.27□□□□□ -0.77
CTDSPL2-201ENST00000260327 PDXDC2PQ6P474 469 aa10.27□□□□□ -0.77
CTDSPL2-201ENST00000260327 TRIM65Q6PJ69 517 aa10.27□□□□□ -0.77
CTDSPL2-201ENST00000260327 GADL1Q6ZQY3 521 aa10.27□□□□□ -0.77
CTDSPL2-201ENST00000260327 PRCCQ92733 491 aaPredicted RBP10.27□□□□□ -0.77
CTDSPL2-201ENST00000260327 ALKBH8Q96BT7 664 aaKnown RBP10.27□□□□□ -0.77
CTDSPL2-201ENST00000260327 BRD8Q9H0E9 1235 aa10.27□□□□□ -0.77
CTDSPL2-201ENST00000260327 COG4Q9H9E3 785 aa10.27□□□□□ -0.77
CTDSPL2-201ENST00000260327 PCMTD2Q9NV79 361 aa10.27□□□□□ -0.77
CTDSPL2-201ENST00000260327 DTNAQ9Y4J8 743 aa10.27□□□□□ -0.77
CTDSPL2-201ENST00000260327 PXDNLA1KZ92 1463 aa10.27□□□□□ -0.77
CTDSPL2-201ENST00000260327 BBOX1O75936 387 aa10.27□□□□□ -0.77
CTDSPL2-201ENST00000260327 TOB1P50616 345 aaPredicted RBP10.27□□□□□ -0.77
CTDSPL2-201ENST00000260327 IYDQ6PHW0 289 aa10.27□□□□□ -0.77
CTDSPL2-201ENST00000260327 LACRTQ9GZZ8 138 aa10.27□□□□□ -0.77
CTDSPL2-201ENST00000260327 KLHL8Q9P2G9 620 aaPredicted RBP10.27□□□□□ -0.77
CTDSPL2-201ENST00000260327 TEKT2Q9UIF3 430 aa10.27□□□□□ -0.77
CTDSPL2-201ENST00000260327 ZNF189O75820 626 aaPredicted RBP10.27□□□□□ -0.77
CTDSPL2-201ENST00000260327 DLGAP3O95886 979 aa10.27□□□□□ -0.77
CTDSPL2-201ENST00000260327 RFC5P40937 340 aa10.27□□□□□ -0.77
CTDSPL2-201ENST00000260327 HADHAP40939 763 aa10.27□□□□□ -0.77
CTDSPL2-201ENST00000260327 THNSL1Q8IYQ7 743 aa10.27□□□□□ -0.77
CTDSPL2-201ENST00000260327 TTC13Q8NBP0 860 aa10.27□□□□□ -0.77
CTDSPL2-201ENST00000260327 PSMC3IPQ9P2W1 217 aaPredicted RBP10.27□□□□□ -0.77
CTDSPL2-201ENST00000260327 HPSEQ9Y251 543 aa10.27□□□□□ -0.77
CTDSPL2-201ENST00000260327 MTO1Q9Y2Z2 717 aaKnown RBP10.27□□□□□ -0.77
CTDSPL2-201ENST00000260327 NEU2Q9Y3R4 380 aa10.27□□□□□ -0.77
CTDSPL2-201ENST00000260327 DENND3A2RUS2 1198 aa10.27□□□□□ -0.77
CTDSPL2-201ENST00000260327 WDR47O94967 919 aa10.27□□□□□ -0.77
CTDSPL2-201ENST00000260327 CYP19A1P11511 503 aaPredicted RBP10.27□□□□□ -0.77
CTDSPL2-201ENST00000260327 PMLP29590 882 aa10.27□□□□□ -0.77
CTDSPL2-201ENST00000260327 LMBRD2Q68DH5 695 aaPredicted RBP10.27□□□□□ -0.77
CTDSPL2-201ENST00000260327 CC2D2BQ6DHV5 1058 aa10.27□□□□□ -0.77
CTDSPL2-201ENST00000260327 ISLR2Q6UXK2 745 aa10.27□□□□□ -0.77
CTDSPL2-201ENST00000260327 RHOT1Q8IXI2 618 aa10.27□□□□□ -0.77
CTDSPL2-201ENST00000260327 SH3GL1Q99961 368 aa10.27□□□□□ -0.77
CTDSPL2-201ENST00000260327 ERP44Q9BS26 406 aa10.27□□□□□ -0.77
CTDSPL2-201ENST00000260327 RNPEPQ9H4A4 650 aa10.27□□□□□ -0.77
CTDSPL2-201ENST00000260327 MANSC1Q9H8J5 431 aa10.27□□□□□ -0.77
CTDSPL2-201ENST00000260327 HEY2Q9UBP5 337 aa10.27□□□□□ -0.77
CTDSPL2-201ENST00000260327 CCND2P30279 289 aa10.26□□□□□ -0.77
CTDSPL2-201ENST00000260327 ITGA8P53708 1063 aa10.26□□□□□ -0.77
CTDSPL2-201ENST00000260327 FASTKD1Q53R41 847 aaKnown RBP10.26□□□□□ -0.77
CTDSPL2-201ENST00000260327 PPP1R2P3Q6NXS1 205 aa10.26□□□□□ -0.77
CTDSPL2-201ENST00000260327 GJB7Q6PEY0 223 aa10.26□□□□□ -0.77
CTDSPL2-201ENST00000260327 CLEC10AQ8IUN9 316 aa10.26□□□□□ -0.77
CTDSPL2-201ENST00000260327 SULF1Q8IWU6 871 aa10.26□□□□□ -0.77
CTDSPL2-201ENST00000260327 DDIASQ8IXT1 998 aa10.26□□□□□ -0.77
CTDSPL2-201ENST00000260327 FAM20AQ96MK3 541 aa10.26□□□□□ -0.77
CTDSPL2-201ENST00000260327 KCNK16Q96T55 309 aa10.26□□□□□ -0.77
CTDSPL2-201ENST00000260327 ZBTB18Q99592 522 aa10.26□□□□□ -0.77
CTDSPL2-201ENST00000260327 V9GYQ6 96 aa10.26□□□□□ -0.77
CTDSPL2-201ENST00000260327 SALL3Q9BXA9 1300 aa10.26□□□□□ -0.77
CTDSPL2-201ENST00000260327 ERCC6L2Q5T890 1561 aa10.26□□□□□ -0.77
CTDSPL2-201ENST00000260327 MYBP10242 640 aa10.26□□□□□ -0.77
CTDSPL2-201ENST00000260327 HERVK_113P62684 666 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms