RNA–Protein interactions for RNA: ENST00000259254.8

GYPC-201, Transcript of glycophorin C (Gerbich blood group), humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GYPC, Length 1,246 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-201ENST00000259254 RPS6KC1Q96S38 1066 aa16.88■□□□□ 0.29
GYPC-201ENST00000259254 PLEKHA5Q9HAU0 1116 aa16.88■□□□□ 0.29
GYPC-201ENST00000259254 INTS13Q9NVM9 706 aa16.88■□□□□ 0.29
GYPC-201ENST00000259254 LRFN2Q9ULH4 789 aa16.88■□□□□ 0.29
GYPC-201ENST00000259254 TTC26A0AVF1 554 aa16.87■□□□□ 0.29
GYPC-201ENST00000259254 C9IYK1 514 aa16.87■□□□□ 0.29
GYPC-201ENST00000259254 ENPP3O14638 875 aa16.87■□□□□ 0.29
GYPC-201ENST00000259254 MEFVO15553 781 aaPredicted RBP16.87■□□□□ 0.29
GYPC-201ENST00000259254 ZNF623O75123 536 aa16.87■□□□□ 0.29
GYPC-201ENST00000259254 NFICP08651 508 aa16.87■□□□□ 0.29
GYPC-201ENST00000259254 GTF2H1P32780 548 aa16.87■□□□□ 0.29
GYPC-201ENST00000259254 AP3M2P53677 418 aa16.87■□□□□ 0.29
GYPC-201ENST00000259254 PPIGQ13427 754 aaKnown RBP eCLIP16.87■□□□□ 0.29
GYPC-201ENST00000259254 TMEM132DQ14C87 1099 aa16.87■□□□□ 0.29
GYPC-201ENST00000259254 DUOXA2Q1HG44 320 aa16.87■□□□□ 0.29
GYPC-201ENST00000259254 CBWD6Q4V339 395 aa16.87■□□□□ 0.29
GYPC-201ENST00000259254 CBWD3Q5JTY5 395 aa16.87■□□□□ 0.29
GYPC-201ENST00000259254 GLRA4Q5JXX5 417 aa16.87■□□□□ 0.29
GYPC-201ENST00000259254 CBWD5Q5RIA9 395 aa16.87■□□□□ 0.29
GYPC-201ENST00000259254 KRT39Q6A163 491 aa16.87■□□□□ 0.29
GYPC-201ENST00000259254 FAM109BQ6ICB4 259 aaPredicted RBP16.87■□□□□ 0.29
GYPC-201ENST00000259254 JADE1Q6IE81 842 aa16.87■□□□□ 0.29
GYPC-201ENST00000259254 GBP6Q6ZN66 633 aa16.87■□□□□ 0.29
GYPC-201ENST00000259254 ANKRD36BP1Q96IX9 119 aa16.87■□□□□ 0.29
GYPC-201ENST00000259254 TMEM117Q9H0C3 514 aa16.87■□□□□ 0.29
GYPC-201ENST00000259254 RSAD1Q9HA92 442 aa16.87■□□□□ 0.29
GYPC-201ENST00000259254 TMEM8AQ9HCN3 771 aa16.87■□□□□ 0.29
GYPC-201ENST00000259254 UBN1Q9NPG3 1134 aa16.87■□□□□ 0.29
GYPC-201ENST00000259254 PTPRJQ12913 1337 aa16.87■□□□□ 0.29
GYPC-201ENST00000259254 TANC1Q9C0D5 1861 aa16.86■□□□□ 0.29
GYPC-201ENST00000259254 MEIS3P2A8K0S8 358 aa16.86■□□□□ 0.29
GYPC-201ENST00000259254 PFKMP08237 780 aa16.86■□□□□ 0.29
GYPC-201ENST00000259254 ACRP10323 421 aa16.86■□□□□ 0.29
GYPC-201ENST00000259254 ACTN1P12814 892 aa16.86■□□□□ 0.29
GYPC-201ENST00000259254 MLH1P40692 756 aa16.86■□□□□ 0.29
GYPC-201ENST00000259254 SYCP1Q15431 976 aa16.86■□□□□ 0.29
GYPC-201ENST00000259254 TMC6Q7Z403 805 aa16.86■□□□□ 0.29
GYPC-201ENST00000259254 EFCAB13Q8IY85 973 aa16.86■□□□□ 0.29
GYPC-201ENST00000259254 OR5B17Q8NGF7 314 aa16.86■□□□□ 0.29
GYPC-201ENST00000259254 CACTINQ8WUQ7 758 aaKnown RBP16.86■□□□□ 0.29
GYPC-201ENST00000259254 ZNF516Q92618 1163 aa16.86■□□□□ 0.29
GYPC-201ENST00000259254 CRACR2AQ9BSW2 395 aa16.86■□□□□ 0.29
GYPC-201ENST00000259254 MTMR12Q9C0I1 747 aa16.86■□□□□ 0.29
GYPC-201ENST00000259254 IL23AQ9NPF7 189 aa16.86■□□□□ 0.29
GYPC-201ENST00000259254 RNF19AQ9NV58 838 aa16.86■□□□□ 0.29
GYPC-201ENST00000259254 MTMR10Q9NXD2 777 aa16.86■□□□□ 0.29
GYPC-201ENST00000259254 CNTN3Q9P232 1028 aa16.86■□□□□ 0.29
GYPC-201ENST00000259254 INPP5FQ9Y2H2 1132 aa16.86■□□□□ 0.29
GYPC-201ENST00000259254 GIT1Q9Y2X7 761 aa16.86■□□□□ 0.29
GYPC-201ENST00000259254 PCDHB7Q9Y5E2 793 aa16.86■□□□□ 0.29
GYPC-201ENST00000259254 P4HA2O15460 535 aa16.85■□□□□ 0.29
GYPC-201ENST00000259254 EOMESO95936 686 aa16.85■□□□□ 0.29
GYPC-201ENST00000259254 ATF7P17544 494 aaPredicted RBP16.85■□□□□ 0.29
GYPC-201ENST00000259254 PIK3CAP42336 1068 aa16.85■□□□□ 0.29
GYPC-201ENST00000259254 CLDN10P78369 228 aa16.85■□□□□ 0.29
GYPC-201ENST00000259254 FAM189BP81408 668 aa16.85■□□□□ 0.29
GYPC-201ENST00000259254 SMAD3P84022 425 aaKnown RBP16.85■□□□□ 0.29
GYPC-201ENST00000259254 EXOC3L4Q17RC7 722 aa16.85■□□□□ 0.29
GYPC-201ENST00000259254 GLB1LQ6UWU2 654 aa16.85■□□□□ 0.29
GYPC-201ENST00000259254 AGMOQ6ZNB7 445 aa16.85■□□□□ 0.29
GYPC-201ENST00000259254 SV2AQ7L0J3 742 aa16.85■□□□□ 0.29
GYPC-201ENST00000259254 ZNF598Q86UK7 904 aaKnown RBP16.85■□□□□ 0.29
GYPC-201ENST00000259254 ZFP42Q96MM3 310 aa16.85■□□□□ 0.29
GYPC-201ENST00000259254 GAD1Q99259 594 aa16.85■□□□□ 0.29
GYPC-201ENST00000259254 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.85■□□□□ 0.29
GYPC-201ENST00000259254 LSM14BQ9BX40 385 aaKnown RBP16.85■□□□□ 0.29
GYPC-201ENST00000259254 RNF216Q9NWF9 866 aaPredicted RBP16.85■□□□□ 0.29
GYPC-201ENST00000259254 TMEM161AQ9NX61 479 aa16.85■□□□□ 0.29
GYPC-201ENST00000259254 GCNT4Q9P109 453 aa16.85■□□□□ 0.29
GYPC-201ENST00000259254 DERAQ9Y315 318 aa16.85■□□□□ 0.29
GYPC-201ENST00000259254 R3HCC1Q9Y3T6 440 aaKnown RBP16.85■□□□□ 0.29
GYPC-201ENST00000259254 C2CD2Q9Y426 696 aa16.85■□□□□ 0.29
GYPC-201ENST00000259254 SMIM28A0A1B0GU29 152 aa16.84■□□□□ 0.29
GYPC-201ENST00000259254 ABHD14A-ACY1A0A1B0GW23 586 aa16.84■□□□□ 0.29
GYPC-201ENST00000259254 A0A1W2PQC6 194 aa16.84■□□□□ 0.29
GYPC-201ENST00000259254 XPOTO43592 962 aaKnown RBP16.84■□□□□ 0.29
GYPC-201ENST00000259254 KRT19P08727 400 aa16.84■□□□□ 0.29
GYPC-201ENST00000259254 CDC25BP30305 580 aa16.84■□□□□ 0.29
GYPC-201ENST00000259254 MCCD1P59942 119 aaPredicted RBP16.84■□□□□ 0.29
GYPC-201ENST00000259254 TRPC3Q13507 836 aa16.84■□□□□ 0.29
GYPC-201ENST00000259254 ZACNQ401N2 412 aa16.84■□□□□ 0.29
GYPC-201ENST00000259254 TDRD10Q5VZ19 366 aaKnown RBP16.84■□□□□ 0.29
GYPC-201ENST00000259254 C16orf59Q7L2K0 433 aa16.84■□□□□ 0.29
GYPC-201ENST00000259254 TRAPPC11Q7Z392 1133 aa16.84■□□□□ 0.29
GYPC-201ENST00000259254 NT5DC4Q86YG4 428 aa16.84■□□□□ 0.29
GYPC-201ENST00000259254 VSTM4Q8IW00 320 aa16.84■□□□□ 0.29
GYPC-201ENST00000259254 ABI1Q8IZP0 508 aa16.84■□□□□ 0.29
GYPC-201ENST00000259254 SPC24Q8NBT2 197 aa16.84■□□□□ 0.29
GYPC-201ENST00000259254 BEST2Q8NFU1 509 aa16.84■□□□□ 0.29
GYPC-201ENST00000259254 INTS2Q9H0H0 1204 aaKnown RBP16.84■□□□□ 0.29
GYPC-201ENST00000259254 CXCL16Q9H2A7 254 aa16.84■□□□□ 0.29
GYPC-201ENST00000259254 ELAC1Q9H777 363 aaKnown RBP16.84■□□□□ 0.29
GYPC-201ENST00000259254 UBQLN1Q9UMX0 589 aaKnown RBP16.84■□□□□ 0.29
GYPC-201ENST00000259254 SCN5AQ14524 2016 aa16.84■□□□□ 0.29
GYPC-201ENST00000259254 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.83■□□□□ 0.28
GYPC-201ENST00000259254 GTPBP10A4D1E9 387 aaKnown RBP16.83■□□□□ 0.28
GYPC-201ENST00000259254 ARL5CA6NH57 179 aa16.83■□□□□ 0.28
GYPC-201ENST00000259254 ZBBXA8MT70 800 aa16.83■□□□□ 0.28
GYPC-201ENST00000259254 EFCAB14O75071 495 aa16.83■□□□□ 0.28
GYPC-201ENST00000259254 AMHP03971 560 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms