RNA–Protein interactions for RNA: ENST00000249014.4

CDC42EP1-201, Transcript of CDC42 effector protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDC42EP1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-201ENST00000249014 CPA5Q8WXQ8 436 aa20.91■□□□□ 0.94
CDC42EP1-201ENST00000249014 ZNF302Q9NR11 478 aa20.91■□□□□ 0.94
CDC42EP1-201ENST00000249014 ANAPC7Q9UJX3 599 aa20.91■□□□□ 0.94
CDC42EP1-201ENST00000249014 AGO2Q9UKV8 859 aaKnown RBP20.91■□□□□ 0.94
CDC42EP1-201ENST00000249014 AFG3L2Q9Y4W6 797 aa20.91■□□□□ 0.94
CDC42EP1-201ENST00000249014 MROH7Q68CQ1 1323 aa20.91■□□□□ 0.94
CDC42EP1-201ENST00000249014 PODXLO00592 558 aa20.9■□□□□ 0.94
CDC42EP1-201ENST00000249014 ERLIN2O94905 339 aa20.9■□□□□ 0.94
CDC42EP1-201ENST00000249014 ATG7O95352 703 aa20.9■□□□□ 0.94
CDC42EP1-201ENST00000249014 VNN1O95497 513 aa20.9■□□□□ 0.94
CDC42EP1-201ENST00000249014 OATP04181 439 aa20.9■□□□□ 0.94
CDC42EP1-201ENST00000249014 PMS2P54278 862 aa20.9■□□□□ 0.94
CDC42EP1-201ENST00000249014 ZBTB41Q5SVQ8 909 aa20.9■□□□□ 0.94
CDC42EP1-201ENST00000249014 LLGL2Q6P1M3 1020 aa20.9■□□□□ 0.94
CDC42EP1-201ENST00000249014 MCOLN2Q8IZK6 566 aa20.9■□□□□ 0.94
CDC42EP1-201ENST00000249014 ARFGAP2Q8N6H7 521 aa20.9■□□□□ 0.94
CDC42EP1-201ENST00000249014 FNBP1Q96RU3 617 aa20.9■□□□□ 0.94
CDC42EP1-201ENST00000249014 PORCNQ9H237 461 aa20.9■□□□□ 0.94
CDC42EP1-201ENST00000249014 PABPC3Q9H361 631 aaKnown RBP20.9■□□□□ 0.94
CDC42EP1-201ENST00000249014 DHX33Q9H6R0 707 aaKnown RBP20.9■□□□□ 0.94
CDC42EP1-201ENST00000249014 KIAA1586Q9HCI6 787 aa20.9■□□□□ 0.94
CDC42EP1-201ENST00000249014 HOXC10Q9NYD6 342 aa20.9■□□□□ 0.94
CDC42EP1-201ENST00000249014 PTPN22Q9Y2R2 807 aa20.9■□□□□ 0.94
CDC42EP1-201ENST00000249014 FAM169AQ9Y6X4 670 aa20.9■□□□□ 0.94
CDC42EP1-201ENST00000249014 SRCAPQ6ZRS2 3230 aa20.9■□□□□ 0.94
CDC42EP1-201ENST00000249014 EDN1P05305 212 aa20.9■□□□□ 0.94
CDC42EP1-201ENST00000249014 SCP2P22307 547 aa20.9■□□□□ 0.94
CDC42EP1-201ENST00000249014 RRM1P23921 792 aa20.9■□□□□ 0.94
CDC42EP1-201ENST00000249014 MAPK4P31152 587 aa20.9■□□□□ 0.94
CDC42EP1-201ENST00000249014 STRN3Q13033 797 aa20.9■□□□□ 0.94
CDC42EP1-201ENST00000249014 STXBP2Q15833 593 aa20.9■□□□□ 0.94
CDC42EP1-201ENST00000249014 UBAP2Q5T6F2 1119 aaKnown RBP20.9■□□□□ 0.94
CDC42EP1-201ENST00000249014 CCDC105Q8IYK2 499 aa20.9■□□□□ 0.94
CDC42EP1-201ENST00000249014 RNF25Q96BH1 459 aaPredicted RBP20.9■□□□□ 0.94
CDC42EP1-201ENST00000249014 TSPYL1Q9H0U9 437 aa20.9■□□□□ 0.94
CDC42EP1-201ENST00000249014 MTUS1Q9ULD2 1270 aa20.9■□□□□ 0.94
CDC42EP1-201ENST00000249014 PCDHB2Q9Y5E7 798 aa20.9■□□□□ 0.94
CDC42EP1-201ENST00000249014 LTBP3Q9NS15 1303 aa20.89■□□□□ 0.94
CDC42EP1-201ENST00000249014 CLDN3O15551 220 aa20.89■□□□□ 0.94
CDC42EP1-201ENST00000249014 TMOD1P28289 359 aa20.89■□□□□ 0.94
CDC42EP1-201ENST00000249014 PIK3CAP42336 1068 aa20.89■□□□□ 0.94
CDC42EP1-201ENST00000249014 MAGOHP61326 146 aaKnown RBP20.89■□□□□ 0.94
CDC42EP1-201ENST00000249014 PPP2R2AP63151 447 aa20.89■□□□□ 0.94
CDC42EP1-201ENST00000249014 IFFO1Q0D2I5 559 aa20.89■□□□□ 0.94
CDC42EP1-201ENST00000249014 PRKG1Q13976 671 aa20.89■□□□□ 0.94
CDC42EP1-201ENST00000249014 SEPT14Q6ZU15 432 aa20.89■□□□□ 0.94
CDC42EP1-201ENST00000249014 CEP89Q96ST8 783 aa20.89■□□□□ 0.94
CDC42EP1-201ENST00000249014 LRRIQ4A6NIV6 560 aa20.89■□□□□ 0.93
CDC42EP1-201ENST00000249014 CFHP08603 1231 aa20.89■□□□□ 0.93
CDC42EP1-201ENST00000249014 NUDT17P0C025 328 aa20.89■□□□□ 0.93
CDC42EP1-201ENST00000249014 ICAM3P32942 547 aa20.89■□□□□ 0.93
CDC42EP1-201ENST00000249014 EIF3BP55884 814 aaKnown RBP20.89■□□□□ 0.93
CDC42EP1-201ENST00000249014 ODF2Q5BJF6 829 aa20.89■□□□□ 0.93
CDC42EP1-201ENST00000249014 WDR44Q5JSH3 913 aa20.89■□□□□ 0.93
CDC42EP1-201ENST00000249014 C12orf50Q8NA57 414 aaPredicted RBP20.89■□□□□ 0.93
CDC42EP1-201ENST00000249014 APOBEC3GQ9HC16 384 aaKnown RBP20.89■□□□□ 0.93
CDC42EP1-201ENST00000249014 GGA3Q9NZ52 723 aa20.89■□□□□ 0.93
CDC42EP1-201ENST00000249014 POLR2AP24928 1970 aaKnown RBP20.89■□□□□ 0.93
CDC42EP1-201ENST00000249014 CAND2O75155 1236 aa20.88■□□□□ 0.93
CDC42EP1-201ENST00000249014 ACO1P21399 889 aaKnown RBP20.88■□□□□ 0.93
CDC42EP1-201ENST00000249014 ABCD1P33897 745 aa20.88■□□□□ 0.93
CDC42EP1-201ENST00000249014 ARL2P36404 184 aa20.88■□□□□ 0.93
CDC42EP1-201ENST00000249014 MAGEA9P43362 315 aa20.88■□□□□ 0.93
CDC42EP1-201ENST00000249014 NAMPTP43490 491 aa20.88■□□□□ 0.93
CDC42EP1-201ENST00000249014 NLRP14Q86W24 1093 aa20.88■□□□□ 0.93
CDC42EP1-201ENST00000249014 MYCBPAPQ8TBZ2 947 aa20.88■□□□□ 0.93
CDC42EP1-201ENST00000249014 ZNF473Q8WTR7 871 aaKnown RBP20.88■□□□□ 0.93
CDC42EP1-201ENST00000249014 FAM81BQ96LP2 452 aa20.88■□□□□ 0.93
CDC42EP1-201ENST00000249014 CCT8L2Q96SF2 557 aa20.88■□□□□ 0.93
CDC42EP1-201ENST00000249014 TARS2Q9BW92 718 aaKnown RBP20.88■□□□□ 0.93
CDC42EP1-201ENST00000249014 AVENQ9NQS1 362 aaPredicted RBP20.88■□□□□ 0.93
CDC42EP1-201ENST00000249014 K7ERI5 159 aa20.87■□□□□ 0.93
CDC42EP1-201ENST00000249014 PIGRP01833 764 aa20.87■□□□□ 0.93
CDC42EP1-201ENST00000249014 CYP1A1P04798 512 aaPredicted RBP20.87■□□□□ 0.93
CDC42EP1-201ENST00000249014 MKRN4PQ13434 485 aaPredicted RBP20.87■□□□□ 0.93
CDC42EP1-201ENST00000249014 DEPTORQ8TB45 409 aa20.87■□□□□ 0.93
CDC42EP1-201ENST00000249014 KCNN1Q92952 543 aa20.87■□□□□ 0.93
CDC42EP1-201ENST00000249014 TLCD1Q96CP7 247 aa20.87■□□□□ 0.93
CDC42EP1-201ENST00000249014 CYFIP2Q96F07 1278 aa20.87■□□□□ 0.93
CDC42EP1-201ENST00000249014 SEMA4AQ9H3S1 761 aa20.87■□□□□ 0.93
CDC42EP1-201ENST00000249014 LRRC19Q9H756 370 aa20.87■□□□□ 0.93
CDC42EP1-201ENST00000249014 PPANQ9NQ55 473 aaKnown RBP20.87■□□□□ 0.93
CDC42EP1-201ENST00000249014 RBAKQ9NYW8 714 aaPredicted RBP20.87■□□□□ 0.93
CDC42EP1-201ENST00000249014 ANKFY1Q9P2R3 1169 aa20.87■□□□□ 0.93
CDC42EP1-201ENST00000249014 FBXO40Q9UH90 709 aa20.87■□□□□ 0.93
CDC42EP1-201ENST00000249014 E7EVH7 732 aa20.87■□□□□ 0.93
CDC42EP1-201ENST00000249014 FSCN2O14926 492 aa20.87■□□□□ 0.93
CDC42EP1-201ENST00000249014 FNTAP49354 379 aa20.87■□□□□ 0.93
CDC42EP1-201ENST00000249014 CENPCQ03188 943 aa20.87■□□□□ 0.93
CDC42EP1-201ENST00000249014 SLC29A2Q14542 456 aa20.87■□□□□ 0.93
CDC42EP1-201ENST00000249014 DAB2IPQ5VWQ8 1189 aa20.87■□□□□ 0.93
CDC42EP1-201ENST00000249014 SCARA3Q6AZY7 606 aa20.87■□□□□ 0.93
CDC42EP1-201ENST00000249014 ZNF677Q86XU0 584 aa20.87■□□□□ 0.93
CDC42EP1-201ENST00000249014 ANKRD35Q8N283 1001 aa20.87■□□□□ 0.93
CDC42EP1-201ENST00000249014 DNERQ8NFT8 737 aa20.87■□□□□ 0.93
CDC42EP1-201ENST00000249014 C1orf54Q8WWF1 131 aa20.87■□□□□ 0.93
CDC42EP1-201ENST00000249014 HERPUD2Q9BSE4 406 aa20.87■□□□□ 0.93
CDC42EP1-201ENST00000249014 PTPRFP10586 1907 aa20.87■□□□□ 0.93
CDC42EP1-201ENST00000249014 IGKV6D-21A0A0A0MT36 114 aa20.86■□□□□ 0.93
CDC42EP1-201ENST00000249014 NOL9Q5SY16 702 aaKnown RBP20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms