RNA–Protein interactions for RNA: ENST00000247225.6

SGPP1-201, Transcript of sphingosine-1-phosphate phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGPP1, Length 3,312 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGPP1-201ENST00000247225 LMO3Q8TAP4 145 aa17.95■□□□□ 0.46
SGPP1-201ENST00000247225 FIZ1Q96SL8 496 aa17.95■□□□□ 0.46
SGPP1-201ENST00000247225 NYAP2Q9P242 653 aa17.95■□□□□ 0.46
SGPP1-201ENST00000247225 ZHX2Q9Y6X8 837 aa17.95■□□□□ 0.46
SGPP1-201ENST00000247225 DENND3A2RUS2 1198 aa17.95■□□□□ 0.46
SGPP1-201ENST00000247225 ENTPD5O75356 428 aa17.95■□□□□ 0.46
SGPP1-201ENST00000247225 LGR5O75473 907 aa17.95■□□□□ 0.46
SGPP1-201ENST00000247225 EPHB2P29323 1055 aa17.95■□□□□ 0.46
SGPP1-201ENST00000247225 NSFP46459 744 aaKnown RBP17.95■□□□□ 0.46
SGPP1-201ENST00000247225 ACOT2P49753 483 aa17.95■□□□□ 0.46
SGPP1-201ENST00000247225 IL9RQ01113 521 aa17.95■□□□□ 0.46
SGPP1-201ENST00000247225 PKN2Q16513 984 aaKnown RBP17.95■□□□□ 0.46
SGPP1-201ENST00000247225 ANKRD20A2Q5SQ80 823 aa17.95■□□□□ 0.46
SGPP1-201ENST00000247225 ANKRD20A1Q5TYW2 823 aa17.95■□□□□ 0.46
SGPP1-201ENST00000247225 ANKRD20A3Q5VUR7 823 aa17.95■□□□□ 0.46
SGPP1-201ENST00000247225 FOXR2Q6PJQ5 311 aa17.95■□□□□ 0.46
SGPP1-201ENST00000247225 P3H4Q92791 437 aa17.95■□□□□ 0.46
SGPP1-201ENST00000247225 PRMT6Q96LA8 375 aaPredicted RBP17.95■□□□□ 0.46
SGPP1-201ENST00000247225 FHDC1Q9C0D6 1143 aaPredicted RBP17.95■□□□□ 0.46
SGPP1-201ENST00000247225 PCDHA3Q9Y5H8 950 aa17.95■□□□□ 0.46
SGPP1-201ENST00000247225 CFAP73A6NFT4 308 aa17.94■□□□□ 0.46
SGPP1-201ENST00000247225 HSPA6P17066 643 aa17.94■□□□□ 0.46
SGPP1-201ENST00000247225 NT5C2P49902 561 aa17.94■□□□□ 0.46
SGPP1-201ENST00000247225 MGAT5Q09328 741 aa17.94■□□□□ 0.46
SGPP1-201ENST00000247225 GPS1Q13098 491 aa17.94■□□□□ 0.46
SGPP1-201ENST00000247225 MDH1BQ5I0G3 518 aa17.94■□□□□ 0.46
SGPP1-201ENST00000247225 CAPRIN2Q6IMN6 1127 aaKnown RBP17.94■□□□□ 0.46
SGPP1-201ENST00000247225 TTC8Q8TAM2 541 aa17.94■□□□□ 0.46
SGPP1-201ENST00000247225 LRRC37BQ96QE4 947 aa17.94■□□□□ 0.46
SGPP1-201ENST00000247225 NUDCD1Q96RS6 583 aa17.94■□□□□ 0.46
SGPP1-201ENST00000247225 KCNH7Q9NS40 1196 aa17.94■□□□□ 0.46
SGPP1-201ENST00000247225 ADAM22Q9P0K1 906 aa17.94■□□□□ 0.46
SGPP1-201ENST00000247225 CCPG1Q9ULG6 757 aa17.94■□□□□ 0.46
SGPP1-201ENST00000247225 KIAA1551Q9HCM1 1747 aa17.94■□□□□ 0.46
SGPP1-201ENST00000247225 SRRM3A6NNA2 597 aaPredicted RBP17.94■□□□□ 0.46
SGPP1-201ENST00000247225 LRRC8CQ8TDW0 803 aa17.94■□□□□ 0.46
SGPP1-201ENST00000247225 KIFAP3Q92845 792 aa17.94■□□□□ 0.46
SGPP1-201ENST00000247225 UBN1Q9NPG3 1134 aa17.94■□□□□ 0.46
SGPP1-201ENST00000247225 CNOT7Q9UIV1 285 aaKnown RBP17.94■□□□□ 0.46
SGPP1-201ENST00000247225 ATP5DP30049 168 aa17.93■□□□□ 0.46
SGPP1-201ENST00000247225 CPA2P48052 419 aa17.93■□□□□ 0.46
SGPP1-201ENST00000247225 MKNK1Q9BUB5 465 aa17.93■□□□□ 0.46
SGPP1-201ENST00000247225 TUFT1Q9NNX1 390 aa17.93■□□□□ 0.46
SGPP1-201ENST00000247225 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.93■□□□□ 0.46
SGPP1-201ENST00000247225 A0A1W2PPM1 405 aa17.93■□□□□ 0.46
SGPP1-201ENST00000247225 C2orf71A6NGG8 1288 aa17.93■□□□□ 0.46
SGPP1-201ENST00000247225 NFIBO00712 420 aa17.93■□□□□ 0.46
SGPP1-201ENST00000247225 MAGEA4P43358 317 aa17.93■□□□□ 0.46
SGPP1-201ENST00000247225 NBPF20Q3BBV1 942 aa17.93■□□□□ 0.46
SGPP1-201ENST00000247225 TMEM270Q6UE05 265 aa17.93■□□□□ 0.46
SGPP1-201ENST00000247225 TRMT10CQ7L0Y3 403 aaKnown RBP17.93■□□□□ 0.46
SGPP1-201ENST00000247225 ZNF668Q96K58 619 aaPredicted RBP17.93■□□□□ 0.46
SGPP1-201ENST00000247225 PHTF1Q9UMS5 762 aa17.93■□□□□ 0.46
SGPP1-201ENST00000247225 CFAP69A5D8W1 941 aa17.93■□□□□ 0.46
SGPP1-201ENST00000247225 ITGB5P18084 799 aa17.93■□□□□ 0.46
SGPP1-201ENST00000247225 ANXA13P27216 316 aa17.93■□□□□ 0.46
SGPP1-201ENST00000247225 NOVP48745 357 aa17.93■□□□□ 0.46
SGPP1-201ENST00000247225 STRN3Q13033 797 aa17.93■□□□□ 0.46
SGPP1-201ENST00000247225 C11orf63Q6NUN7 778 aa17.93■□□□□ 0.46
SGPP1-201ENST00000247225 APBB1IPQ7Z5R6 666 aaPredicted RBP17.93■□□□□ 0.46
SGPP1-201ENST00000247225 LDHDQ86WU2 507 aa17.93■□□□□ 0.46
SGPP1-201ENST00000247225 CKAP2Q8WWK9 683 aa17.93■□□□□ 0.46
SGPP1-201ENST00000247225 MKL1Q969V6 931 aa17.93■□□□□ 0.46
SGPP1-201ENST00000247225 ZBTB10Q96DT7 871 aa17.93■□□□□ 0.46
SGPP1-201ENST00000247225 KIAA1683Q9H0B3 1180 aa17.93■□□□□ 0.46
SGPP1-201ENST00000247225 TRABDQ9H4I3 376 aa17.93■□□□□ 0.46
SGPP1-201ENST00000247225 SGK1O00141 431 aa17.92■□□□□ 0.46
SGPP1-201ENST00000247225 TCF4P15884 667 aa17.92■□□□□ 0.46
SGPP1-201ENST00000247225 CNGA1P29973 690 aa17.92■□□□□ 0.46
SGPP1-201ENST00000247225 USP21Q9UK80 565 aa17.92■□□□□ 0.46
SGPP1-201ENST00000247225 RPA3P35244 121 aaPredicted RBP17.92■□□□□ 0.46
SGPP1-201ENST00000247225 DRG2P55039 364 aaKnown RBP17.92■□□□□ 0.46
SGPP1-201ENST00000247225 TAS2R40P59535 323 aa17.92■□□□□ 0.46
SGPP1-201ENST00000247225 CRYMQ14894 314 aa17.92■□□□□ 0.46
SGPP1-201ENST00000247225 UGCGQ16739 394 aa17.92■□□□□ 0.46
SGPP1-201ENST00000247225 SV2AQ7L0J3 742 aa17.92■□□□□ 0.46
SGPP1-201ENST00000247225 FNBP1Q96RU3 617 aa17.92■□□□□ 0.46
SGPP1-201ENST00000247225 RPS6KC1Q96S38 1066 aa17.92■□□□□ 0.46
SGPP1-201ENST00000247225 SYT11Q9BT88 431 aa17.92■□□□□ 0.46
SGPP1-201ENST00000247225 DMAC2Q9NW81 257 aa17.92■□□□□ 0.46
SGPP1-201ENST00000247225 ANKFY1Q9P2R3 1169 aa17.92■□□□□ 0.46
SGPP1-201ENST00000247225 PCDHB4Q9Y5E5 795 aa17.92■□□□□ 0.46
SGPP1-201ENST00000247225 ARSEP51690 589 aa17.92■□□□□ 0.46
SGPP1-201ENST00000247225 WDR4P57081 412 aaKnown RBP17.92■□□□□ 0.46
SGPP1-201ENST00000247225 AOC3Q16853 763 aa17.92■□□□□ 0.46
SGPP1-201ENST00000247225 KRT39Q6A163 491 aa17.92■□□□□ 0.46
SGPP1-201ENST00000247225 FMNL3Q8IVF7 1028 aa17.92■□□□□ 0.46
SGPP1-201ENST00000247225 OSBPL1AQ9BXW6 950 aa17.92■□□□□ 0.46
SGPP1-201ENST00000247225 RAB20Q9NX57 234 aa17.92■□□□□ 0.46
SGPP1-201ENST00000247225 KAT6AQ92794 2004 aa17.91■□□□□ 0.46
SGPP1-201ENST00000247225 RAD17O75943 681 aa17.91■□□□□ 0.46
SGPP1-201ENST00000247225 ITIH2P19823 946 aa17.91■□□□□ 0.46
SGPP1-201ENST00000247225 TAC1P20366 129 aa17.91■□□□□ 0.46
SGPP1-201ENST00000247225 YWHABP31946 246 aaKnown RBP17.91■□□□□ 0.46
SGPP1-201ENST00000247225 PIK3CAP42336 1068 aa17.91■□□□□ 0.46
SGPP1-201ENST00000247225 BNIP1Q12981 228 aa17.91■□□□□ 0.46
SGPP1-201ENST00000247225 SMTNL2Q2TAL5 461 aa17.91■□□□□ 0.46
SGPP1-201ENST00000247225 MEX3CQ5U5Q3 659 aaKnown RBP17.91■□□□□ 0.46
SGPP1-201ENST00000247225 SCYL3Q8IZE3 742 aa17.91■□□□□ 0.46
SGPP1-201ENST00000247225 ATL2Q8NHH9 583 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms