RNA–Protein interactions for RNA: ENST00000247020.8

SDF2-201, Transcript of stromal cell derived factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2, Length 1,568 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-201ENST00000247020 PTPRJQ12913 1337 aa15.3■□□□□ 0.04
SDF2-201ENST00000247020 A0A087X0T9 212 aa15.29■□□□□ 0.04
SDF2-201ENST00000247020 TNNC2P02585 160 aa15.29■□□□□ 0.04
SDF2-201ENST00000247020 TMEM191BP0C7N4 346 aa15.29■□□□□ 0.04
SDF2-201ENST00000247020 FAM228BP0C875 321 aa15.29■□□□□ 0.04
SDF2-201ENST00000247020 STAG3L1P0CL83 205 aa15.29■□□□□ 0.04
SDF2-201ENST00000247020 GRM5P41594 1212 aa15.29■□□□□ 0.04
SDF2-201ENST00000247020 CHMP4BP1P59074 171 aa15.29■□□□□ 0.04
SDF2-201ENST00000247020 PTPN11Q06124 597 aaPredicted RBP15.29■□□□□ 0.04
SDF2-201ENST00000247020 TUBB2AQ13885 445 aa15.29■□□□□ 0.04
SDF2-201ENST00000247020 NAB2Q15742 525 aa15.29■□□□□ 0.04
SDF2-201ENST00000247020 NBPF20Q3BBV1 942 aa15.29■□□□□ 0.04
SDF2-201ENST00000247020 SLC27A1Q6PCB7 646 aa15.29■□□□□ 0.04
SDF2-201ENST00000247020 CATSPER4Q7RTX7 472 aa15.29■□□□□ 0.04
SDF2-201ENST00000247020 RNF180Q86T96 592 aa15.29■□□□□ 0.04
SDF2-201ENST00000247020 RNF10Q8N5U6 811 aaKnown RBP15.29■□□□□ 0.04
SDF2-201ENST00000247020 CPB2Q96IY4 423 aa15.29■□□□□ 0.04
SDF2-201ENST00000247020 KREMEN1Q96MU8 473 aa15.29■□□□□ 0.04
SDF2-201ENST00000247020 PPP1R16BQ96T49 567 aa15.29■□□□□ 0.04
SDF2-201ENST00000247020 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.29■□□□□ 0.04
SDF2-201ENST00000247020 TUBB2BQ9BVA1 445 aa15.29■□□□□ 0.04
SDF2-201ENST00000247020 A0A0U1RQJ8 604 aa15.28■□□□□ 0.04
SDF2-201ENST00000247020 PHACTR2O75167 634 aa15.28■□□□□ 0.04
SDF2-201ENST00000247020 ASGR1P07306 291 aa15.28■□□□□ 0.04
SDF2-201ENST00000247020 NCOA4Q13772 614 aa15.28■□□□□ 0.04
SDF2-201ENST00000247020 SNX17Q15036 470 aa15.28■□□□□ 0.04
SDF2-201ENST00000247020 SEZ6Q53EL9 994 aa15.28■□□□□ 0.04
SDF2-201ENST00000247020 LMBRD2Q68DH5 695 aaPredicted RBP15.28■□□□□ 0.04
SDF2-201ENST00000247020 CXCL17Q6UXB2 119 aa15.28■□□□□ 0.04
SDF2-201ENST00000247020 TRAPPC11Q7Z392 1133 aa15.28■□□□□ 0.04
SDF2-201ENST00000247020 OR5B17Q8NGF7 314 aa15.28■□□□□ 0.04
SDF2-201ENST00000247020 SLC30A5Q8TAD4 765 aa15.28■□□□□ 0.04
SDF2-201ENST00000247020 ATRIPQ8WXE1 791 aa15.28■□□□□ 0.04
SDF2-201ENST00000247020 TAF4BQ92750 862 aa15.28■□□□□ 0.04
SDF2-201ENST00000247020 OSMRQ99650 979 aa15.28■□□□□ 0.04
SDF2-201ENST00000247020 L2HGDHQ9H9P8 463 aa15.28■□□□□ 0.04
SDF2-201ENST00000247020 PLEKHA5Q9HAU0 1116 aa15.28■□□□□ 0.04
SDF2-201ENST00000247020 NAGPAQ9UK23 515 aa15.28■□□□□ 0.04
SDF2-201ENST00000247020 GUCA1BQ9UMX6 200 aa15.28■□□□□ 0.04
SDF2-201ENST00000247020 MROH7Q68CQ1 1323 aa15.28■□□□□ 0.04
SDF2-201ENST00000247020 RCCD1A6NED2 376 aa15.28■□□□□ 0.04
SDF2-201ENST00000247020 MOXD2PA6NHM9 499 aa15.28■□□□□ 0.04
SDF2-201ENST00000247020 M0QZ92 97 aa15.28■□□□□ 0.04
SDF2-201ENST00000247020 LRRN2O75325 713 aa15.28■□□□□ 0.04
SDF2-201ENST00000247020 CSDE1O75534 798 aaKnown RBP15.28■□□□□ 0.04
SDF2-201ENST00000247020 ASS1P00966 412 aaKnown RBP15.28■□□□□ 0.04
SDF2-201ENST00000247020 HOXA11P31270 313 aaPredicted RBP15.28■□□□□ 0.04
SDF2-201ENST00000247020 KCNA10Q16322 511 aa15.28■□□□□ 0.04
SDF2-201ENST00000247020 SGSM1Q2NKQ1 1148 aa15.28■□□□□ 0.04
SDF2-201ENST00000247020 ZNF569Q5MCW4 686 aa15.28■□□□□ 0.04
SDF2-201ENST00000247020 ALKBH5Q6P6C2 394 aaKnown RBP15.28■□□□□ 0.04
SDF2-201ENST00000247020 CEP120Q8N960 986 aa15.28■□□□□ 0.04
SDF2-201ENST00000247020 TRIM58Q8NG06 486 aa15.28■□□□□ 0.04
SDF2-201ENST00000247020 SECISBP2LQ93073 1101 aaKnown RBP15.28■□□□□ 0.04
SDF2-201ENST00000247020 ACAP3Q96P50 834 aa15.28■□□□□ 0.04
SDF2-201ENST00000247020 WDR24Q96S15 920 aa15.28■□□□□ 0.04
SDF2-201ENST00000247020 TSPAN18Q96SJ8 248 aa15.28■□□□□ 0.04
SDF2-201ENST00000247020 TSEN34Q9BSV6 310 aaKnown RBP15.28■□□□□ 0.04
SDF2-201ENST00000247020 CCDC94Q9BW85 323 aaPredicted RBP15.28■□□□□ 0.04
SDF2-201ENST00000247020 LACRTQ9GZZ8 138 aa15.28■□□□□ 0.04
SDF2-201ENST00000247020 DERAQ9Y315 318 aa15.28■□□□□ 0.04
SDF2-201ENST00000247020 C2CD2Q9Y426 696 aa15.28■□□□□ 0.04
SDF2-201ENST00000247020 CXCL8P10145 99 aa15.27■□□□□ 0.03
SDF2-201ENST00000247020 BPIFB4P59827 614 aa15.27■□□□□ 0.03
SDF2-201ENST00000247020 NOP14P78316 857 aaKnown RBP15.27■□□□□ 0.03
SDF2-201ENST00000247020 MRPS6P82932 125 aaKnown RBP15.27■□□□□ 0.03
SDF2-201ENST00000247020 TMEM62Q0P6H9 643 aa15.27■□□□□ 0.03
SDF2-201ENST00000247020 CUL2Q13617 745 aa15.27■□□□□ 0.03
SDF2-201ENST00000247020 SERINC5Q86VE9 423 aa15.27■□□□□ 0.03
SDF2-201ENST00000247020 CDR2LQ86X02 465 aaPredicted RBP15.27■□□□□ 0.03
SDF2-201ENST00000247020 ZNF677Q86XU0 584 aa15.27■□□□□ 0.03
SDF2-201ENST00000247020 EFCAB13Q8IY85 973 aa15.27■□□□□ 0.03
SDF2-201ENST00000247020 MYRIPQ8NFW9 859 aa15.27■□□□□ 0.03
SDF2-201ENST00000247020 ZNF296Q8WUU4 475 aaPredicted RBP15.27■□□□□ 0.03
SDF2-201ENST00000247020 KAT5Q92993 513 aa15.27■□□□□ 0.03
SDF2-201ENST00000247020 TATDN2Q93075 761 aa15.27■□□□□ 0.03
SDF2-201ENST00000247020 AGPAT1Q99943 283 aa15.27■□□□□ 0.03
SDF2-201ENST00000247020 CELF4Q9BZC1 486 aaKnown RBP15.27■□□□□ 0.03
SDF2-201ENST00000247020 MTMR12Q9C0I1 747 aa15.27■□□□□ 0.03
SDF2-201ENST00000247020 CNTN6Q9UQ52 1028 aa15.27■□□□□ 0.03
SDF2-201ENST00000247020 TRPV2Q9Y5S1 764 aa15.27■□□□□ 0.03
SDF2-201ENST00000247020 ANO9A1A5B4 782 aa15.26■□□□□ 0.03
SDF2-201ENST00000247020 CTAGE9A4FU28 777 aa15.26■□□□□ 0.03
SDF2-201ENST00000247020 DDX3XO00571 662 aaKnown RBP eCLIP15.26■□□□□ 0.032e-8■■□□□ 13
SDF2-201ENST00000247020 TACC1O75410 805 aa15.26■□□□□ 0.03
SDF2-201ENST00000247020 PNMA6AP0CW24 399 aaPredicted RBP15.26■□□□□ 0.03
SDF2-201ENST00000247020 TNFAIP3P21580 790 aa15.26■□□□□ 0.03
SDF2-201ENST00000247020 GTF2F1P35269 517 aaKnown RBP eCLIP15.26■□□□□ 0.03
SDF2-201ENST00000247020 ZNF200P98182 395 aaPredicted RBP15.26■□□□□ 0.03
SDF2-201ENST00000247020 TRPC3Q13507 836 aa15.26■□□□□ 0.03
SDF2-201ENST00000247020 SLC10A6Q3KNW5 377 aa15.26■□□□□ 0.03
SDF2-201ENST00000247020 GDF6Q6KF10 455 aaPredicted RBP15.26■□□□□ 0.03
SDF2-201ENST00000247020 SLC35F6Q8N357 371 aa15.26■□□□□ 0.03
SDF2-201ENST00000247020 OLIG1Q8TAK6 271 aa15.26■□□□□ 0.03
SDF2-201ENST00000247020 EPS8L1Q8TE68 723 aa15.26■□□□□ 0.03
SDF2-201ENST00000247020 FAM212AQ96EL1 285 aa15.26■□□□□ 0.03
SDF2-201ENST00000247020 CALR3Q96L12 384 aaKnown RBP15.26■□□□□ 0.03
SDF2-201ENST00000247020 IRX2Q9BZI1 471 aaPredicted RBP15.26■□□□□ 0.03
SDF2-201ENST00000247020 FAM124BQ9H5Z6 455 aaPredicted RBP15.26■□□□□ 0.03
SDF2-201ENST00000247020 CDHR5Q9HBB8 845 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms