RNA–Protein interactions for RNA: ENST00000241704.7

COPA-201, Transcript of coatomer protein complex subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPA, Length 4,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-201ENST00000241704 OSBPL7Q9BZF2 842 aa11.65□□□□□ -0.54
COPA-201ENST00000241704 FAM153AQ9UHL3 310 aa11.65□□□□□ -0.54
COPA-201ENST00000241704 HUS1O60921 280 aa11.65□□□□□ -0.54
COPA-201ENST00000241704 CTSHP09668 335 aa11.65□□□□□ -0.54
COPA-201ENST00000241704 MAN1A1P33908 653 aa11.65□□□□□ -0.54
COPA-201ENST00000241704 SERPINB4P48594 390 aa11.65□□□□□ -0.54
COPA-201ENST00000241704 SLC12A2P55011 1212 aa11.65□□□□□ -0.54
COPA-201ENST00000241704 CCDC92Q53HC0 331 aaPredicted RBP11.65□□□□□ -0.54
COPA-201ENST00000241704 CFAP157Q5JU67 520 aa11.65□□□□□ -0.54
COPA-201ENST00000241704 C1orf228Q6PIY5 440 aa11.65□□□□□ -0.54
COPA-201ENST00000241704 AGGF1Q8N302 714 aaeCLIP11.65□□□□□ -0.544e-6■□□□□ 11.2
COPA-201ENST00000241704 MREGQ8N565 214 aa11.65□□□□□ -0.54
COPA-201ENST00000241704 CHST13Q8NET6 341 aa11.65□□□□□ -0.54
COPA-201ENST00000241704 OLFM3Q96PB7 478 aa11.65□□□□□ -0.54
COPA-201ENST00000241704 PIDD1Q9HB75 910 aa11.65□□□□□ -0.54
COPA-201ENST00000241704 KCNH7Q9NS40 1196 aa11.65□□□□□ -0.54
COPA-201ENST00000241704 PPP1R9AQ9ULJ8 1098 aa11.65□□□□□ -0.54
COPA-201ENST00000241704 ZNF148Q9UQR1 794 aa11.65□□□□□ -0.54
COPA-201ENST00000241704 MAPK13O15264 365 aa11.64□□□□□ -0.55
COPA-201ENST00000241704 NVLO15381 856 aaKnown RBP11.64□□□□□ -0.55
COPA-201ENST00000241704 CRCPO75575 148 aa11.64□□□□□ -0.55
COPA-201ENST00000241704 HNRNPCP07910 306 aaKnown RBP eCLIP11.64□□□□□ -0.559e-8■■□□□ 12.7
COPA-201ENST00000241704 VPS41P49754 854 aa11.64□□□□□ -0.55
COPA-201ENST00000241704 RHBDL3P58872 404 aa11.64□□□□□ -0.55
COPA-201ENST00000241704 RPS6P62753 249 aaKnown RBP11.64□□□□□ -0.55
COPA-201ENST00000241704 DNAJC24Q6P3W2 148 aa11.64□□□□□ -0.55
COPA-201ENST00000241704 CATSPER3Q86XQ3 398 aa11.64□□□□□ -0.55
COPA-201ENST00000241704 BBOF1Q8ND07 529 aa11.64□□□□□ -0.55
COPA-201ENST00000241704 CAPN6Q9Y6Q1 641 aa11.64□□□□□ -0.55
COPA-201ENST00000241704 PFASO15067 1338 aa11.64□□□□□ -0.55
COPA-201ENST00000241704 MSH4O15457 936 aa11.64□□□□□ -0.55
COPA-201ENST00000241704 SMNDC1O75940 238 aaKnown RBP eCLIP11.64□□□□□ -0.552e-7■■■■□ 25.1
COPA-201ENST00000241704 RAB27AP51159 221 aa11.64□□□□□ -0.55
COPA-201ENST00000241704 LMNB2Q03252 620 aa11.64□□□□□ -0.55
COPA-201ENST00000241704 PPP2R5CQ13362 524 aa11.64□□□□□ -0.55
COPA-201ENST00000241704 NBPF12Q5TAG4 269 aaPredicted RBP11.64□□□□□ -0.55
COPA-201ENST00000241704 OR6B2Q6IFH4 312 aa11.64□□□□□ -0.55
COPA-201ENST00000241704 SCN4BQ8IWT1 228 aa11.64□□□□□ -0.55
COPA-201ENST00000241704 BEST2Q8NFU1 509 aa11.64□□□□□ -0.55
COPA-201ENST00000241704 INTS2Q9H0H0 1204 aaKnown RBP11.64□□□□□ -0.55
COPA-201ENST00000241704 SLC38A10Q9HBR0 1119 aa11.64□□□□□ -0.55
COPA-201ENST00000241704 GDF3Q9NR23 364 aa11.64□□□□□ -0.55
COPA-201ENST00000241704 SEPT10Q9P0V9 454 aa11.64□□□□□ -0.55
COPA-201ENST00000241704 INTUQ9ULD6 942 aa11.64□□□□□ -0.55
COPA-201ENST00000241704 UBOX5O94941 541 aa11.64□□□□□ -0.55
COPA-201ENST00000241704 SREBF1P36956 1147 aa11.64□□□□□ -0.55
COPA-201ENST00000241704 ALDH5A1P51649 535 aaPredicted RBP11.64□□□□□ -0.55
COPA-201ENST00000241704 DRAP1Q14919 205 aaPredicted RBP11.64□□□□□ -0.55
COPA-201ENST00000241704 HSP90AA5PQ58FG0 334 aa11.64□□□□□ -0.55
COPA-201ENST00000241704 PDXDC1Q6P996 788 aa11.64□□□□□ -0.55
COPA-201ENST00000241704 ZNF449Q6P9G9 518 aa11.64□□□□□ -0.55
COPA-201ENST00000241704 IQCKQ8N0W5 287 aa11.64□□□□□ -0.55
COPA-201ENST00000241704 OPTNQ96CV9 577 aa11.64□□□□□ -0.55
COPA-201ENST00000241704 TRIM49P0CI25 452 aa11.64□□□□□ -0.55
COPA-201ENST00000241704 TRIM49CP0CI26 452 aa11.64□□□□□ -0.55
COPA-201ENST00000241704 TSPY1Q01534 308 aa11.64□□□□□ -0.55
COPA-201ENST00000241704 GFPT1Q06210 699 aaPredicted RBP11.64□□□□□ -0.55
COPA-201ENST00000241704 GRB10Q13322 594 aa11.64□□□□□ -0.55
COPA-201ENST00000241704 GRIK5Q16478 980 aa11.64□□□□□ -0.55
COPA-201ENST00000241704 MAP3K20Q9NYL2 800 aaKnown RBP11.64□□□□□ -0.55
COPA-201ENST00000241704 LMO7Q8WWI1 1683 aa11.63□□□□□ -0.55
COPA-201ENST00000241704 hCG_2014768A0A024R1R8 64 aa11.63□□□□□ -0.55
COPA-201ENST00000241704 DCTN3O75935 186 aa11.63□□□□□ -0.55
COPA-201ENST00000241704 AGTP01019 485 aa11.63□□□□□ -0.55
COPA-201ENST00000241704 TROVE2P10155 538 aaKnown RBP eCLIP11.63□□□□□ -0.552e-6■□□□□ 9.2
COPA-201ENST00000241704 PMS2P54278 862 aa11.63□□□□□ -0.55
COPA-201ENST00000241704 COG7P83436 770 aa11.63□□□□□ -0.55
COPA-201ENST00000241704 LGSNQ5TDP6 509 aa11.63□□□□□ -0.55
COPA-201ENST00000241704 GPC2Q8N158 579 aa11.63□□□□□ -0.55
COPA-201ENST00000241704 GDAP1Q8TB36 358 aa11.63□□□□□ -0.55
COPA-201ENST00000241704 MRPL4Q9BYD3 311 aaKnown RBP11.63□□□□□ -0.55
COPA-201ENST00000241704 DDX47Q9H0S4 455 aaKnown RBP11.63□□□□□ -0.55
COPA-201ENST00000241704 SMARCAD1Q9H4L7 1026 aa11.63□□□□□ -0.55
COPA-201ENST00000241704 KBTBD4Q9NVX7 518 aa11.63□□□□□ -0.55
COPA-201ENST00000241704 PDP2Q9P2J9 529 aa11.63□□□□□ -0.55
COPA-201ENST00000241704 DLG5Q8TDM6 1919 aa11.63□□□□□ -0.55
COPA-201ENST00000241704 MDM2Q00987 491 aaPredicted RBP11.63□□□□□ -0.55
COPA-201ENST00000241704 KAZNQ674X7 775 aa11.63□□□□□ -0.55
COPA-201ENST00000241704 RNF180Q86T96 592 aa11.63□□□□□ -0.55
COPA-201ENST00000241704 GPD1LQ8N335 351 aa11.63□□□□□ -0.55
COPA-201ENST00000241704 ELMOD1Q8N336 334 aa11.63□□□□□ -0.55
COPA-201ENST00000241704 RNF149Q8NC42 400 aa11.63□□□□□ -0.55
COPA-201ENST00000241704 CACNA1FO60840 1977 aa11.63□□□□□ -0.55
COPA-201ENST00000241704 EMSYQ7Z589 1322 aa11.63□□□□□ -0.55
COPA-201ENST00000241704 TXNDC9O14530 226 aa11.63□□□□□ -0.55
COPA-201ENST00000241704 DPYSL4O14531 572 aa11.63□□□□□ -0.55
COPA-201ENST00000241704 ATF2P15336 505 aa11.63□□□□□ -0.55
COPA-201ENST00000241704 RGS2P41220 211 aa11.63□□□□□ -0.55
COPA-201ENST00000241704 EFNA5P52803 228 aa11.63□□□□□ -0.55
COPA-201ENST00000241704 LCA5Q86VQ0 697 aa11.63□□□□□ -0.55
COPA-201ENST00000241704 SAMD3Q8N6K7 520 aa11.63□□□□□ -0.55
COPA-201ENST00000241704 SYT2Q8N9I0 419 aaPredicted RBP11.63□□□□□ -0.55
COPA-201ENST00000241704 C1orf131Q8NDD1 294 aaKnown RBP11.63□□□□□ -0.55
COPA-201ENST00000241704 PITPNM3Q9BZ71 974 aa11.63□□□□□ -0.55
COPA-201ENST00000241704 GLIS2Q9BZE0 524 aaPredicted RBP11.63□□□□□ -0.55
COPA-201ENST00000241704 VPS37BQ9H9H4 285 aa11.63□□□□□ -0.55
COPA-201ENST00000241704 ANGPTL2Q9UKU9 493 aa11.63□□□□□ -0.55
COPA-201ENST00000241704 TCP11X1B4DZS4 312 aa11.63□□□□□ -0.55
COPA-201ENST00000241704 ALDH1A1P00352 501 aa11.63□□□□□ -0.55
COPA-201ENST00000241704 PLS3P13797 630 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms