RNA–Protein interactions for RNA: ENST00000233027.9

NEK4-201, Transcript of NIMA related kinase 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK4, Length 6,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-201ENST00000233027 RABGAP1LQ5R372 815 aa14.11□□□□□ -0.15
NEK4-201ENST00000233027 ITPRIPL1Q6GPH6 555 aa14.11□□□□□ -0.15
NEK4-201ENST00000233027 DACH2Q96NX9 599 aa14.11□□□□□ -0.15
NEK4-201ENST00000233027 GCNAQ96QF7 691 aa14.11□□□□□ -0.15
NEK4-201ENST00000233027 KLF6Q99612 283 aaPredicted RBP14.11□□□□□ -0.15
NEK4-201ENST00000233027 PCMTD2Q9NV79 361 aa14.11□□□□□ -0.15
NEK4-201ENST00000233027 FDPSP14324 419 aaKnown RBP14.11□□□□□ -0.15
NEK4-201ENST00000233027 MMTAG2Q9BU76 263 aaKnown RBP14.11□□□□□ -0.15
NEK4-201ENST00000233027 SUFUQ9UMX1 484 aa14.11□□□□□ -0.15
NEK4-201ENST00000233027 SLC8A2Q9UPR5 921 aa14.11□□□□□ -0.15
NEK4-201ENST00000233027 APRTP07741 180 aa14.1□□□□□ -0.15
NEK4-201ENST00000233027 KCNJ6P48051 423 aa14.1□□□□□ -0.15
NEK4-201ENST00000233027 LDHDQ86WU2 507 aa14.1□□□□□ -0.15
NEK4-201ENST00000233027 ERP27Q96DN0 273 aa14.1□□□□□ -0.15
NEK4-201ENST00000233027 ZFATQ9P243 1243 aa14.1□□□□□ -0.15
NEK4-201ENST00000233027 DUOXA2Q1HG44 320 aa14.1□□□□□ -0.15
NEK4-201ENST00000233027 ARHGEF1Q92888 912 aaKnown RBP14.1□□□□□ -0.15
NEK4-201ENST00000233027 TMEM143Q96AN5 459 aa14.1□□□□□ -0.15
NEK4-201ENST00000233027 MAGEB5Q9BZ81 275 aa14.1□□□□□ -0.15
NEK4-201ENST00000233027 NDFIP2Q9NV92 336 aa14.1□□□□□ -0.15
NEK4-201ENST00000233027 ZNF711Q9Y462 761 aa14.1□□□□□ -0.15
NEK4-201ENST00000233027 TMEM247A6NEH6 219 aa14.1□□□□□ -0.15
NEK4-201ENST00000233027 PSMD14O00487 310 aa14.1□□□□□ -0.15
NEK4-201ENST00000233027 TAP1Q03518 808 aa14.1□□□□□ -0.15
NEK4-201ENST00000233027 DCAF4L1Q3SXM0 396 aa14.1□□□□□ -0.15
NEK4-201ENST00000233027 JAMLQ86YT9 394 aa14.1□□□□□ -0.15
NEK4-201ENST00000233027 MDM1Q8TC05 714 aa14.1□□□□□ -0.15
NEK4-201ENST00000233027 SPHKAPQ2M3C7 1700 aa14.1□□□□□ -0.15
NEK4-201ENST00000233027 NAB2Q15742 525 aa14.1□□□□□ -0.15
NEK4-201ENST00000233027 SENP7Q9BQF6 1050 aa14.1□□□□□ -0.15
NEK4-201ENST00000233027 KCNA2P16389 499 aa14.1□□□□□ -0.15
NEK4-201ENST00000233027 CNGA3Q16281 694 aa14.1□□□□□ -0.15
NEK4-201ENST00000233027 NAF1Q96HR8 494 aaKnown RBP14.1□□□□□ -0.15
NEK4-201ENST00000233027 STXBP3O00186 592 aa14.09□□□□□ -0.15
NEK4-201ENST00000233027 SYDE1Q6ZW31 735 aaPredicted RBP14.09□□□□□ -0.15
NEK4-201ENST00000233027 TRPM8Q7Z2W7 1104 aa14.09□□□□□ -0.15
NEK4-201ENST00000233027 SEPT12Q8IYM1 358 aa14.09□□□□□ -0.15
NEK4-201ENST00000233027 NDUFAF2Q8N183 169 aa14.09□□□□□ -0.15
NEK4-201ENST00000233027 RNF149Q8NC42 400 aa14.09□□□□□ -0.15
NEK4-201ENST00000233027 USP33Q8TEY7 942 aa14.09□□□□□ -0.15
NEK4-201ENST00000233027 RPAP3Q9H6T3 665 aaPredicted RBP14.09□□□□□ -0.15
NEK4-201ENST00000233027 CASS4Q9NQ75 786 aa14.09□□□□□ -0.15
NEK4-201ENST00000233027 CHMP2BQ9UQN3 213 aa14.09□□□□□ -0.15
NEK4-201ENST00000233027 SSU72P8A0A1W2PR75 194 aa14.09□□□□□ -0.15
NEK4-201ENST00000233027 PLEKP08567 350 aaPredicted RBP14.09□□□□□ -0.15
NEK4-201ENST00000233027 COBLL1Q53SF7 1204 aa14.09□□□□□ -0.15
NEK4-201ENST00000233027 TMEM154Q6P9G4 183 aa14.09□□□□□ -0.15
NEK4-201ENST00000233027 EPB41L4AQ9HCS5 686 aaPredicted RBP14.09□□□□□ -0.15
NEK4-201ENST00000233027 TEKT2Q9UIF3 430 aa14.09□□□□□ -0.15
NEK4-201ENST00000233027 TMEM120BA0PK00 339 aa14.09□□□□□ -0.15
NEK4-201ENST00000233027 ARHGAP10A1A4S6 786 aa14.09□□□□□ -0.15
NEK4-201ENST00000233027 ENO3P13929 434 aaPredicted RBP14.09□□□□□ -0.15
NEK4-201ENST00000233027 COMTP21964 271 aa14.09□□□□□ -0.15
NEK4-201ENST00000233027 KCNJ1P48048 391 aa14.09□□□□□ -0.15
NEK4-201ENST00000233027 AGBL2Q5U5Z8 902 aa14.09□□□□□ -0.15
NEK4-201ENST00000233027 MMP19Q99542 508 aa14.09□□□□□ -0.15
NEK4-201ENST00000233027 ADNPQ9H2P0 1102 aa14.09□□□□□ -0.15
NEK4-201ENST00000233027 PSMC3IPQ9P2W1 217 aaPredicted RBP14.09□□□□□ -0.15
NEK4-201ENST00000233027 ALKQ9UM73 1620 aa14.09□□□□□ -0.15
NEK4-201ENST00000233027 ITIH2P19823 946 aa14.09□□□□□ -0.15
NEK4-201ENST00000233027 NUP93Q8N1F7 819 aa14.09□□□□□ -0.15
NEK4-201ENST00000233027 PNKPQ96T60 521 aa14.09□□□□□ -0.15
NEK4-201ENST00000233027 EML4Q9HC35 981 aaKnown RBP14.09□□□□□ -0.15
NEK4-201ENST00000233027 RAB6BQ9NRW1 208 aa14.09□□□□□ -0.15
NEK4-201ENST00000233027 ARHGAP26Q9UNA1 814 aa14.09□□□□□ -0.15
NEK4-201ENST00000233027 PCDHA10Q9Y5I2 948 aa14.09□□□□□ -0.15
NEK4-201ENST00000233027 SPATA31A3Q5VYP0 1347 aa14.09□□□□□ -0.15
NEK4-201ENST00000233027 ENO4A6NNW6 628 aa14.08□□□□□ -0.15
NEK4-201ENST00000233027 PPP1R3GB7ZBB8 358 aa14.08□□□□□ -0.15
NEK4-201ENST00000233027 POLRMTO00411 1230 aaKnown RBP14.08□□□□□ -0.15
NEK4-201ENST00000233027 MAN1A2O60476 641 aa14.08□□□□□ -0.15
NEK4-201ENST00000233027 SEMA3FQ13275 785 aa14.08□□□□□ -0.15
NEK4-201ENST00000233027 RABL6Q3YEC7 729 aaPredicted RBP14.08□□□□□ -0.15
NEK4-201ENST00000233027 BRINP3Q76B58 766 aa14.08□□□□□ -0.15
NEK4-201ENST00000233027 ZCWPW1Q9H0M4 648 aa14.08□□□□□ -0.15
NEK4-201ENST00000233027 SMG5Q9UPR3 1016 aaKnown RBP14.08□□□□□ -0.15
NEK4-201ENST00000233027 PDS5AQ29RF7 1337 aaKnown RBP14.08□□□□□ -0.15
NEK4-201ENST00000233027 ZFXP17010 805 aaPredicted RBP14.08□□□□□ -0.16
NEK4-201ENST00000233027 ITGA8P53708 1063 aa14.08□□□□□ -0.16
NEK4-201ENST00000233027 WDR72Q3MJ13 1102 aa14.08□□□□□ -0.16
NEK4-201ENST00000233027 PPP4R4Q6NUP7 873 aa14.08□□□□□ -0.16
NEK4-201ENST00000233027 ARMC2Q8NEN0 867 aa14.08□□□□□ -0.16
NEK4-201ENST00000233027 THTPAQ9BU02 230 aa14.08□□□□□ -0.16
NEK4-201ENST00000233027 GRAP2O75791 330 aa14.08□□□□□ -0.16
NEK4-201ENST00000233027 PRKCBP05771 671 aa14.08□□□□□ -0.16
NEK4-201ENST00000233027 PTK7Q13308 1070 aa14.08□□□□□ -0.16
NEK4-201ENST00000233027 CEP55Q53EZ4 464 aa14.08□□□□□ -0.16
NEK4-201ENST00000233027 RNF219Q5W0B1 726 aaPredicted RBP14.08□□□□□ -0.16
NEK4-201ENST00000233027 PRPF38AQ8NAV1 312 aaKnown RBP14.08□□□□□ -0.16
NEK4-201ENST00000233027 SPON2Q9BUD6 331 aa14.08□□□□□ -0.16
NEK4-201ENST00000233027 LZTS1Q9Y250 596 aa14.08□□□□□ -0.16
NEK4-201ENST00000233027 FAM47DPA6NHR8 397 aa14.08□□□□□ -0.16
NEK4-201ENST00000233027 TCN1P20061 433 aaPredicted RBP14.08□□□□□ -0.16
NEK4-201ENST00000233027 IL10P22301 178 aa14.08□□□□□ -0.16
NEK4-201ENST00000233027 TTLL4Q14679 1199 aa14.08□□□□□ -0.16
NEK4-201ENST00000233027 USP38Q8NB14 1042 aa14.08□□□□□ -0.16
NEK4-201ENST00000233027 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.08□□□□□ -0.16
NEK4-201ENST00000233027 ZC3H7BQ9UGR2 993 aaKnown RBP14.08□□□□□ -0.16
NEK4-201ENST00000233027 HLA-DPA1P20036 260 aa14.08□□□□□ -0.16
NEK4-201ENST00000233027 IRAK1P51617 712 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms