RNA–Protein interactions for RNA: ENST00000219299.8

CCDC113-201, Transcript of coiled-coil domain containing 113, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC113, Length 5,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-201ENST00000219299 TRIM11Q96F44 468 aa10.02□□□□□ -0.81
CCDC113-201ENST00000219299 NUF2Q9BZD4 464 aa10.02□□□□□ -0.81
CCDC113-201ENST00000219299 MRPL47Q9HD33 250 aaKnown RBP10.02□□□□□ -0.81
CCDC113-201ENST00000219299 PDGFRBP09619 1106 aa10.02□□□□□ -0.81
CCDC113-201ENST00000219299 ZNF18P17022 549 aa10.02□□□□□ -0.81
CCDC113-201ENST00000219299 IFT88Q13099 833 aa10.02□□□□□ -0.81
CCDC113-201ENST00000219299 CENPPQ6IPU0 288 aa10.02□□□□□ -0.81
CCDC113-201ENST00000219299 KIAA0895Q8NCT3 520 aa10.02□□□□□ -0.81
CCDC113-201ENST00000219299 SEMA6BQ9H3T3 888 aa10.02□□□□□ -0.81
CCDC113-201ENST00000219299 CYP26A1O43174 497 aa10.02□□□□□ -0.81
CCDC113-201ENST00000219299 TRAPPC3O43617 180 aa10.02□□□□□ -0.81
CCDC113-201ENST00000219299 SMIM24O75264 130 aa10.02□□□□□ -0.81
CCDC113-201ENST00000219299 B3GAT3O94766 335 aa10.02□□□□□ -0.81
CCDC113-201ENST00000219299 CCNE2O96020 404 aa10.02□□□□□ -0.81
CCDC113-201ENST00000219299 CPB1P15086 417 aa10.02□□□□□ -0.81
CCDC113-201ENST00000219299 KRT15P19012 456 aa10.02□□□□□ -0.81
CCDC113-201ENST00000219299 SAPCD2Q86UD0 394 aa10.02□□□□□ -0.81
CCDC113-201ENST00000219299 GLYCTKQ8IVS8 523 aa10.02□□□□□ -0.81
CCDC113-201ENST00000219299 REM2Q8IYK8 340 aaPredicted RBP10.02□□□□□ -0.81
CCDC113-201ENST00000219299 CCDC197Q8NCU1 140 aa10.02□□□□□ -0.81
CCDC113-201ENST00000219299 MYH2Q9UKX2 1941 aa10.02□□□□□ -0.81
CCDC113-201ENST00000219299 UBE4BO95155 1302 aa10.02□□□□□ -0.81
CCDC113-201ENST00000219299 TAF1P21675 1872 aa10.01□□□□□ -0.81
CCDC113-201ENST00000219299 A0A1W2PQC6 194 aa10.01□□□□□ -0.81
CCDC113-201ENST00000219299 ADORA2BP29275 332 aa10.01□□□□□ -0.81
CCDC113-201ENST00000219299 PRKCZQ05513 592 aa10.01□□□□□ -0.81
CCDC113-201ENST00000219299 TTI2Q6NXR4 508 aa10.01□□□□□ -0.81
CCDC113-201ENST00000219299 SLC35F6Q8N357 371 aa10.01□□□□□ -0.81
CCDC113-201ENST00000219299 RNF139Q8WU17 664 aa10.01□□□□□ -0.81
CCDC113-201ENST00000219299 BAZ2AQ9UIF9 1905 aaKnown RBP10.01□□□□□ -0.81
CCDC113-201ENST00000219299 A0A1B0GTH6 734 aa10.01□□□□□ -0.81
CCDC113-201ENST00000219299 ADAMTS3O15072 1205 aa10.01□□□□□ -0.81
CCDC113-201ENST00000219299 FARP2O94887 1054 aaPredicted RBP10.01□□□□□ -0.81
CCDC113-201ENST00000219299 WEE2P0C1S8 567 aa10.01□□□□□ -0.81
CCDC113-201ENST00000219299 UCHL3P15374 230 aa10.01□□□□□ -0.81
CCDC113-201ENST00000219299 PTGISQ16647 500 aa10.01□□□□□ -0.81
CCDC113-201ENST00000219299 CDO1Q16878 200 aa10.01□□□□□ -0.81
CCDC113-201ENST00000219299 SGSM1Q2NKQ1 1148 aa10.01□□□□□ -0.81
CCDC113-201ENST00000219299 RASIP1Q5U651 963 aa10.01□□□□□ -0.81
CCDC113-201ENST00000219299 MPZL3Q6UWV2 235 aa10.01□□□□□ -0.81
CCDC113-201ENST00000219299 PARD6BQ9BYG5 372 aa10.01□□□□□ -0.81
CCDC113-201ENST00000219299 AGPAT5Q9NUQ2 364 aa10.01□□□□□ -0.81
CCDC113-201ENST00000219299 PCDHA13Q9Y5I0 950 aa10.01□□□□□ -0.81
CCDC113-201ENST00000219299 AKAP3O75969 853 aa10.01□□□□□ -0.81
CCDC113-201ENST00000219299 VPS41P49754 854 aa10.01□□□□□ -0.81
CCDC113-201ENST00000219299 EPHB4P54760 987 aa10.01□□□□□ -0.81
CCDC113-201ENST00000219299 SLC12A3P55017 1021 aa10.01□□□□□ -0.81
CCDC113-201ENST00000219299 NOP14P78316 857 aaKnown RBP10.01□□□□□ -0.81
CCDC113-201ENST00000219299 NPY5RQ15761 445 aa10.01□□□□□ -0.81
CCDC113-201ENST00000219299 E2F4Q16254 413 aa10.01□□□□□ -0.81
CCDC113-201ENST00000219299 UGCGQ16739 394 aa10.01□□□□□ -0.81
CCDC113-201ENST00000219299 C1orf186Q6ZWK4 172 aa10.01□□□□□ -0.81
CCDC113-201ENST00000219299 LENG1Q96BZ8 264 aaPredicted RBP10.01□□□□□ -0.81
CCDC113-201ENST00000219299 POP1Q99575 1024 aaKnown RBP10.01□□□□□ -0.81
CCDC113-201ENST00000219299 MMTAG2Q9BU76 263 aaKnown RBP10.01□□□□□ -0.81
CCDC113-201ENST00000219299 APEX2Q9UBZ4 518 aa10.01□□□□□ -0.81
CCDC113-201ENST00000219299 NFASCO94856 1347 aa10.01□□□□□ -0.81
CCDC113-201ENST00000219299 FRMPD4Q14CM0 1322 aa10.01□□□□□ -0.81
CCDC113-201ENST00000219299 UNCXA6NJT0 531 aa10.01□□□□□ -0.81
CCDC113-201ENST00000219299 M0QYV0 167 aa10.01□□□□□ -0.81
CCDC113-201ENST00000219299 GMNNO75496 209 aa10.01□□□□□ -0.81
CCDC113-201ENST00000219299 FTCDO95954 541 aa10.01□□□□□ -0.81
CCDC113-201ENST00000219299 SPATA31C1P0DKV0 1188 aa10.01□□□□□ -0.81
CCDC113-201ENST00000219299 HTRA3P83110 453 aa10.01□□□□□ -0.81
CCDC113-201ENST00000219299 KCNA1Q09470 495 aa10.01□□□□□ -0.81
CCDC113-201ENST00000219299 PAN2Q504Q3 1202 aaKnown RBP10.01□□□□□ -0.81
CCDC113-201ENST00000219299 LGSNQ5TDP6 509 aa10.01□□□□□ -0.81
CCDC113-201ENST00000219299 ENOSF1Q7L5Y1 443 aa10.01□□□□□ -0.81
CCDC113-201ENST00000219299 ANKRD42Q8N9B4 389 aa10.01□□□□□ -0.81
CCDC113-201ENST00000219299 CNOT8Q9UFF9 292 aaKnown RBP10.01□□□□□ -0.81
CCDC113-201ENST00000219299 NRAPQ86VF7 1730 aa10.01□□□□□ -0.81
CCDC113-201ENST00000219299 A6NJR5 290 aa10□□□□□ -0.81
CCDC113-201ENST00000219299 HMGCRP04035 888 aa10□□□□□ -0.81
CCDC113-201ENST00000219299 APLP1P51693 650 aa10□□□□□ -0.81
CCDC113-201ENST00000219299 GFPT1Q06210 699 aaPredicted RBP10□□□□□ -0.81
CCDC113-201ENST00000219299 P3H4Q92791 437 aa10□□□□□ -0.81
CCDC113-201ENST00000219299 ATP8B3O60423 1300 aa10□□□□□ -0.81
CCDC113-201ENST00000219299 NRCAMQ92823 1304 aa10□□□□□ -0.81
CCDC113-201ENST00000219299 SLX4Q8IY92 1834 aa10□□□□□ -0.81
CCDC113-201ENST00000219299 SPEF2Q9C093 1822 aa10□□□□□ -0.81
CCDC113-201ENST00000219299 SUN1O94901 812 aa10□□□□□ -0.81
CCDC113-201ENST00000219299 IL18RAPO95256 599 aa10□□□□□ -0.81
CCDC113-201ENST00000219299 ITGB3P05106 788 aa10□□□□□ -0.81
CCDC113-201ENST00000219299 SNRPFP62306 86 aaKnown RBP10□□□□□ -0.81
CCDC113-201ENST00000219299 PPARDQ03181 441 aa10□□□□□ -0.81
CCDC113-201ENST00000219299 LDLRAD1Q5T700 205 aa10□□□□□ -0.81
CCDC113-201ENST00000219299 ANO5Q75V66 913 aa10□□□□□ -0.81
CCDC113-201ENST00000219299 MGARPQ8TDB4 240 aa10□□□□□ -0.81
CCDC113-201ENST00000219299 ZBTB45Q96K62 511 aaPredicted RBP10□□□□□ -0.81
CCDC113-201ENST00000219299 RNPEPQ9H4A4 650 aa10□□□□□ -0.81
CCDC113-201ENST00000219299 TMEM8AQ9HCN3 771 aa10□□□□□ -0.81
CCDC113-201ENST00000219299 VCX3AQ9NNX9 186 aa10□□□□□ -0.81
CCDC113-201ENST00000219299 TMEM39AQ9NV64 488 aa10□□□□□ -0.81
CCDC113-201ENST00000219299 TPX2Q9ULW0 747 aaKnown RBP10□□□□□ -0.81
CCDC113-201ENST00000219299 FRMD3A2A2Y4 597 aa10□□□□□ -0.81
CCDC113-201ENST00000219299 CD4P01730 458 aa10□□□□□ -0.81
CCDC113-201ENST00000219299 RPSAP08865 295 aaKnown RBP10□□□□□ -0.81
CCDC113-201ENST00000219299 STAG3L1P0CL83 205 aa10□□□□□ -0.81
CCDC113-201ENST00000219299 SF3A3Q12874 501 aaKnown RBP eCLIP10□□□□□ -0.81
CCDC113-201ENST00000219299 PPP1R2P3Q6NXS1 205 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms