RNA–Protein interactions for RNA: ENST00000219084.10

CHD9-201, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 8,739 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-201ENST00000219084 STXBP2Q15833 593 aa4.65□□□□□ -1.67
CHD9-201ENST00000219084 SULF1Q8IWU6 871 aa4.65□□□□□ -1.67
CHD9-201ENST00000219084 THNSL1Q8IYQ7 743 aa4.65□□□□□ -1.67
CHD9-201ENST00000219084 PUS3Q9BZE2 481 aaKnown RBP4.65□□□□□ -1.67
CHD9-201ENST00000219084 PABPC3Q9H361 631 aaKnown RBP4.65□□□□□ -1.67
CHD9-201ENST00000219084 RPL26L1Q9UNX3 145 aaKnown RBP4.65□□□□□ -1.67
CHD9-201ENST00000219084 PLAGL2Q9UPG8 496 aa4.65□□□□□ -1.67
CHD9-201ENST00000219084 CDYLQ9Y232 598 aa4.65□□□□□ -1.67
CHD9-201ENST00000219084 POTECB2RU33 542 aa4.65□□□□□ -1.67
CHD9-201ENST00000219084 DGAT1O75907 488 aa4.65□□□□□ -1.67
CHD9-201ENST00000219084 LSM8O95777 96 aaKnown RBP4.65□□□□□ -1.67
CHD9-201ENST00000219084 IGKV5-2P06315 115 aa4.65□□□□□ -1.67
CHD9-201ENST00000219084 PYGMP11217 842 aa4.65□□□□□ -1.67
CHD9-201ENST00000219084 GEMIN4P57678 1058 aaKnown RBP4.65□□□□□ -1.67
CHD9-201ENST00000219084 MYL6P60660 151 aa4.65□□□□□ -1.67
CHD9-201ENST00000219084 EAPPQ56P03 285 aaPredicted RBP4.65□□□□□ -1.67
CHD9-201ENST00000219084 PRMT9Q6P2P2 845 aa4.65□□□□□ -1.67
CHD9-201ENST00000219084 RGS9BPQ6ZS82 235 aa4.65□□□□□ -1.67
CHD9-201ENST00000219084 IGDCC4Q8TDY8 1250 aa4.65□□□□□ -1.67
CHD9-201ENST00000219084 CENPTQ96BT3 561 aa4.65□□□□□ -1.67
CHD9-201ENST00000219084 LXNQ9BS40 222 aa4.65□□□□□ -1.67
CHD9-201ENST00000219084 ZNF518BQ9C0D4 1074 aa4.65□□□□□ -1.67
CHD9-201ENST00000219084 DCLRE1BQ9H816 532 aa4.65□□□□□ -1.67
CHD9-201ENST00000219084 ZFATQ9P243 1243 aa4.65□□□□□ -1.67
CHD9-201ENST00000219084 TUBGCP4Q9UGJ1 667 aa4.65□□□□□ -1.67
CHD9-201ENST00000219084 DCDC2Q9UHG0 476 aa4.65□□□□□ -1.67
CHD9-201ENST00000219084 MTCL1Q9Y4B5 1905 aaKnown RBP4.64□□□□□ -1.67
CHD9-201ENST00000219084 SCN11AQ9UI33 1791 aa4.64□□□□□ -1.67
CHD9-201ENST00000219084 XRN1Q8IZH2 1706 aaKnown RBP4.64□□□□□ -1.67
CHD9-201ENST00000219084 MAPTP10636 758 aaKnown RBP4.64□□□□□ -1.67
CHD9-201ENST00000219084 CALB2P22676 271 aa4.64□□□□□ -1.67
CHD9-201ENST00000219084 XPAP23025 273 aaPredicted RBP4.64□□□□□ -1.67
CHD9-201ENST00000219084 FOXO4P98177 505 aa4.64□□□□□ -1.67
CHD9-201ENST00000219084 ZNF200P98182 395 aaPredicted RBP4.64□□□□□ -1.67
CHD9-201ENST00000219084 TSPY1Q01534 308 aa4.64□□□□□ -1.67
CHD9-201ENST00000219084 ACTN3Q08043 901 aaPredicted RBP4.64□□□□□ -1.67
CHD9-201ENST00000219084 LRRC41Q15345 812 aa4.64□□□□□ -1.67
CHD9-201ENST00000219084 TRMT5Q32P41 509 aaKnown RBP4.64□□□□□ -1.67
CHD9-201ENST00000219084 TMEM270Q6UE05 265 aa4.64□□□□□ -1.67
CHD9-201ENST00000219084 SUGP1Q8IWZ8 645 aaKnown RBP4.64□□□□□ -1.67
CHD9-201ENST00000219084 SLC35G2Q8TBE7 412 aa4.64□□□□□ -1.67
CHD9-201ENST00000219084 NAF1Q96HR8 494 aaKnown RBP4.64□□□□□ -1.67
CHD9-201ENST00000219084 NSL1Q96IY1 281 aa4.64□□□□□ -1.67
CHD9-201ENST00000219084 TNIP3Q96KP6 325 aa4.64□□□□□ -1.67
CHD9-201ENST00000219084 EIF2AK1Q9BQI3 630 aaKnown RBP4.64□□□□□ -1.67
CHD9-201ENST00000219084 CXorf56Q9H5V9 222 aa4.64□□□□□ -1.67
CHD9-201ENST00000219084 NARFQ9UHQ1 456 aa4.64□□□□□ -1.67
CHD9-201ENST00000219084 ENOPH1Q9UHY7 261 aa4.64□□□□□ -1.67
CHD9-201ENST00000219084 ZMYM2Q9UBW7 1377 aa4.64□□□□□ -1.67
CHD9-201ENST00000219084 RGPD8O14715 1765 aaPredicted RBP4.64□□□□□ -1.67
CHD9-201ENST00000219084 DIAPH2O60879 1101 aa4.64□□□□□ -1.67
CHD9-201ENST00000219084 GYPCP04921 128 aa4.64□□□□□ -1.67
CHD9-201ENST00000219084 HK2P52789 917 aa4.64□□□□□ -1.67
CHD9-201ENST00000219084 BCAR1P56945 870 aa4.64□□□□□ -1.67
CHD9-201ENST00000219084 PURAQ00577 322 aaKnown RBP4.64□□□□□ -1.67
CHD9-201ENST00000219084 GUCY1A3Q02108 690 aa4.64□□□□□ -1.67
CHD9-201ENST00000219084 EPHA7Q15375 998 aa4.64□□□□□ -1.67
CHD9-201ENST00000219084 TRIM60Q495X7 471 aa4.64□□□□□ -1.67
CHD9-201ENST00000219084 USP17L2Q6R6M4 530 aa4.64□□□□□ -1.67
CHD9-201ENST00000219084 PPIL6Q8IXY8 311 aa4.64□□□□□ -1.67
CHD9-201ENST00000219084 HSPH1Q92598 858 aa4.64□□□□□ -1.67
CHD9-201ENST00000219084 FAM161BQ96MY7 647 aa4.64□□□□□ -1.67
CHD9-201ENST00000219084 USP21Q9UK80 565 aa4.64□□□□□ -1.67
CHD9-201ENST00000219084 SNX24Q9Y343 169 aa4.64□□□□□ -1.67
CHD9-201ENST00000219084 FRMD3A2A2Y4 597 aa4.64□□□□□ -1.67
CHD9-201ENST00000219084 HUS1O60921 280 aa4.64□□□□□ -1.67
CHD9-201ENST00000219084 E2F6O75461 281 aa4.64□□□□□ -1.67
CHD9-201ENST00000219084 UCHL3P15374 230 aa4.64□□□□□ -1.67
CHD9-201ENST00000219084 IRAK1P51617 712 aa4.64□□□□□ -1.67
CHD9-201ENST00000219084 HSD17B4P51659 736 aa4.64□□□□□ -1.67
CHD9-201ENST00000219084 ERFEQ4G0M1 354 aa4.64□□□□□ -1.67
CHD9-201ENST00000219084 DPY19L2Q6NUT2 758 aa4.64□□□□□ -1.67
CHD9-201ENST00000219084 ZFP1Q6P2D0 407 aa4.64□□□□□ -1.67
CHD9-201ENST00000219084 LVRNQ6Q4G3 990 aa4.64□□□□□ -1.67
CHD9-201ENST00000219084 CAPN12Q6ZSI9 719 aa4.64□□□□□ -1.67
CHD9-201ENST00000219084 MASTLQ96GX5 879 aa4.64□□□□□ -1.67
CHD9-201ENST00000219084 NDEL1Q9GZM8 345 aa4.64□□□□□ -1.67
CHD9-201ENST00000219084 RXFP1Q9HBX9 757 aa4.64□□□□□ -1.67
CHD9-201ENST00000219084 APPL1Q9UKG1 709 aa4.64□□□□□ -1.67
CHD9-201ENST00000219084 PCDHB2Q9Y5E7 798 aa4.64□□□□□ -1.67
CHD9-201ENST00000219084 ABCC6O95255 1503 aa4.64□□□□□ -1.67
CHD9-201ENST00000219084 GSG1L2A8MUP6 293 aa4.64□□□□□ -1.67
CHD9-201ENST00000219084 GOLGA8SH3BPF8 625 aa4.64□□□□□ -1.67
CHD9-201ENST00000219084 SRGAP2O75044 1071 aa4.64□□□□□ -1.67
CHD9-201ENST00000219084 CASP2P42575 452 aa4.64□□□□□ -1.67
CHD9-201ENST00000219084 SGSM1Q2NKQ1 1148 aa4.64□□□□□ -1.67
CHD9-201ENST00000219084 WLSQ5T9L3 541 aa4.64□□□□□ -1.67
CHD9-201ENST00000219084 PATL1Q86TB9 770 aaKnown RBP4.64□□□□□ -1.67
CHD9-201ENST00000219084 ADGRF4Q8IZF3 695 aa4.64□□□□□ -1.67
CHD9-201ENST00000219084 ENGASEQ8NFI3 743 aa4.64□□□□□ -1.67
CHD9-201ENST00000219084 CEP70Q8NHQ1 597 aa4.64□□□□□ -1.67
CHD9-201ENST00000219084 USP13Q92995 863 aaPredicted RBP4.64□□□□□ -1.67
CHD9-201ENST00000219084 RBM15Q96T37 977 aaKnown RBP eCLIP4.64□□□□□ -1.677e-7■■■■□ 20.5
CHD9-201ENST00000219084 EPAS1Q99814 870 aa4.64□□□□□ -1.67
CHD9-201ENST00000219084 C8orf4Q9NR00 106 aa4.64□□□□□ -1.67
CHD9-201ENST00000219084 ZNF302Q9NR11 478 aa4.64□□□□□ -1.67
CHD9-201ENST00000219084 SLC24A2Q9UI40 661 aa4.64□□□□□ -1.67
CHD9-201ENST00000219084 GRID1Q9ULK0 1009 aa4.64□□□□□ -1.67
CHD9-201ENST00000219084 CLEC11AQ9Y240 323 aa4.64□□□□□ -1.67
CHD9-201ENST00000219084 AP3M1Q9Y2T2 418 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms