RNA–Protein interactions for RNA: ENST00000216211.8

UPK3A-201, Transcript of uroplakin 3A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UPK3A, Length 1,051 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-201ENST00000216211 AOC1P19801 751 aa16.45■□□□□ 0.22
UPK3A-201ENST00000216211 FGFR3P22607 806 aa16.45■□□□□ 0.22
UPK3A-201ENST00000216211 OR1D2P34982 312 aa16.45■□□□□ 0.22
UPK3A-201ENST00000216211 BRCC3P46736 316 aa16.45■□□□□ 0.22
UPK3A-201ENST00000216211 YARSP54577 528 aaKnown RBP16.45■□□□□ 0.22
UPK3A-201ENST00000216211 SOX4Q06945 474 aaPredicted RBP16.45■□□□□ 0.22
UPK3A-201ENST00000216211 RAD51AP2Q09MP3 1159 aa16.45■□□□□ 0.22
UPK3A-201ENST00000216211 UPP1Q16831 310 aa16.45■□□□□ 0.22
UPK3A-201ENST00000216211 PDXDC1Q6P996 788 aa16.45■□□□□ 0.22
UPK3A-201ENST00000216211 DCLRE1AQ6PJP8 1040 aa16.45■□□□□ 0.22
UPK3A-201ENST00000216211 C3orf58Q8NDZ4 430 aa16.45■□□□□ 0.22
UPK3A-201ENST00000216211 SNX21Q969T3 373 aa16.45■□□□□ 0.22
UPK3A-201ENST00000216211 UROC1Q96N76 676 aa16.45■□□□□ 0.22
UPK3A-201ENST00000216211 PNMA5Q96PV4 448 aa16.45■□□□□ 0.22
UPK3A-201ENST00000216211 MRPL4Q9BYD3 311 aaKnown RBP16.45■□□□□ 0.22
UPK3A-201ENST00000216211 PTPRHQ9HD43 1115 aa16.45■□□□□ 0.22
UPK3A-201ENST00000216211 KRBA1A5PL33 1030 aa16.44■□□□□ 0.22
UPK3A-201ENST00000216211 GFRA3O60609 400 aa16.44■□□□□ 0.22
UPK3A-201ENST00000216211 CD2BP2O95400 341 aaKnown RBP16.44■□□□□ 0.22
UPK3A-201ENST00000216211 HNRNPA1P09651 372 aaKnown RBP eCLIP16.44■□□□□ 0.22
UPK3A-201ENST00000216211 HARSP12081 509 aaKnown RBP16.44■□□□□ 0.22
UPK3A-201ENST00000216211 FSHRP23945 695 aa16.44■□□□□ 0.22
UPK3A-201ENST00000216211 GJB2P29033 226 aa16.44■□□□□ 0.22
UPK3A-201ENST00000216211 TKTP29401 623 aaKnown RBP16.44■□□□□ 0.22
UPK3A-201ENST00000216211 ATP2C1P98194 919 aaPredicted RBP16.44■□□□□ 0.22
UPK3A-201ENST00000216211 RAB33AQ14088 237 aa16.44■□□□□ 0.22
UPK3A-201ENST00000216211 RILPL1Q5EBL4 403 aa16.44■□□□□ 0.22
UPK3A-201ENST00000216211 XKR4Q5GH76 650 aa16.44■□□□□ 0.22
UPK3A-201ENST00000216211 AXDND1Q5T1B0 1012 aaPredicted RBP16.44■□□□□ 0.22
UPK3A-201ENST00000216211 ALKAL1Q6UXT8 129 aa16.44■□□□□ 0.22
UPK3A-201ENST00000216211 RSPO2Q6UXX9 243 aaPredicted RBP16.44■□□□□ 0.22
UPK3A-201ENST00000216211 SLC7A14Q8TBB6 771 aa16.44■□□□□ 0.22
UPK3A-201ENST00000216211 NXPE3Q969Y0 559 aa16.44■□□□□ 0.22
UPK3A-201ENST00000216211 TMX3Q96JJ7 454 aa16.44■□□□□ 0.22
UPK3A-201ENST00000216211 ZBTB45Q96K62 511 aaPredicted RBP16.44■□□□□ 0.22
UPK3A-201ENST00000216211 PLIN2Q99541 437 aa16.44■□□□□ 0.22
UPK3A-201ENST00000216211 TOPORSQ9NS56 1045 aaPredicted RBP16.44■□□□□ 0.22
UPK3A-201ENST00000216211 MTRRQ9UBK8 725 aa16.44■□□□□ 0.22
UPK3A-201ENST00000216211 WNT16Q9UBV4 365 aa16.44■□□□□ 0.22
UPK3A-201ENST00000216211 CA14Q9ULX7 337 aa16.44■□□□□ 0.22
UPK3A-201ENST00000216211 POLIQ9UNA4 740 aa16.44■□□□□ 0.22
UPK3A-201ENST00000216211 CDY1Q9Y6F8 540 aa16.44■□□□□ 0.22
UPK3A-201ENST00000216211 VPS13AQ96RL7 3174 aa16.43■□□□□ 0.22
UPK3A-201ENST00000216211 VWA3AA6NCI4 1184 aa16.43■□□□□ 0.22
UPK3A-201ENST00000216211 STK25O00506 426 aa16.43■□□□□ 0.22
UPK3A-201ENST00000216211 ABLIM1O14639 778 aa16.43■□□□□ 0.22
UPK3A-201ENST00000216211 MCF2P10911 925 aa16.43■□□□□ 0.22
UPK3A-201ENST00000216211 SRFP11831 508 aa16.43■□□□□ 0.22
UPK3A-201ENST00000216211 PROZP22891 400 aa16.43■□□□□ 0.22
UPK3A-201ENST00000216211 HTR4Q13639 388 aa16.43■□□□□ 0.22
UPK3A-201ENST00000216211 HYIQ5T013 277 aa16.43■□□□□ 0.22
UPK3A-201ENST00000216211 DDX27Q96GQ7 796 aaKnown RBP16.43■□□□□ 0.22
UPK3A-201ENST00000216211 SNX27Q96L92 541 aa16.43■□□□□ 0.22
UPK3A-201ENST00000216211 ZMAT2Q96NC0 199 aaKnown RBP16.43■□□□□ 0.22
UPK3A-201ENST00000216211 ACAP3Q96P50 834 aa16.43■□□□□ 0.22
UPK3A-201ENST00000216211 TCHPQ9BT92 498 aa16.43■□□□□ 0.22
UPK3A-201ENST00000216211 NUMBLQ9Y6R0 609 aa16.43■□□□□ 0.22
UPK3A-201ENST00000216211 MIA3Q5JRA6 1907 aa16.43■□□□□ 0.22
UPK3A-201ENST00000216211 ZFHX2Q9C0A1 2572 aaPredicted RBP16.42■□□□□ 0.22
UPK3A-201ENST00000216211 ANHXE9PGG2 379 aa16.42■□□□□ 0.22
UPK3A-201ENST00000216211 H3BQV1 296 aa16.42■□□□□ 0.22
UPK3A-201ENST00000216211 PODXLO00592 558 aa16.42■□□□□ 0.22
UPK3A-201ENST00000216211 TRAPPC3O43617 180 aa16.42■□□□□ 0.22
UPK3A-201ENST00000216211 GUCY2CP25092 1073 aa16.42■□□□□ 0.22
UPK3A-201ENST00000216211 HOXA9P31269 272 aa16.42■□□□□ 0.22
UPK3A-201ENST00000216211 MPZL3Q6UWV2 235 aa16.42■□□□□ 0.22
UPK3A-201ENST00000216211 SYT2Q8N9I0 419 aaPredicted RBP16.42■□□□□ 0.22
UPK3A-201ENST00000216211 ITFG1Q8TB96 612 aa16.42■□□□□ 0.22
UPK3A-201ENST00000216211 GPR152Q8TDT2 470 aa16.42■□□□□ 0.22
UPK3A-201ENST00000216211 RTP3Q9BQQ7 232 aa16.42■□□□□ 0.22
UPK3A-201ENST00000216211 TIPINQ9BVW5 301 aa16.42■□□□□ 0.22
UPK3A-201ENST00000216211 C17orf75Q9HAS0 396 aa16.42■□□□□ 0.22
UPK3A-201ENST00000216211 HCFC1R1Q9NWW0 138 aa16.42■□□□□ 0.22
UPK3A-201ENST00000216211 COL4A3Q01955 1670 aa16.41■□□□□ 0.22
UPK3A-201ENST00000216211 NPHP3-ACAD11A0A0J9YXS1 232 aa16.41■□□□□ 0.22
UPK3A-201ENST00000216211 PROB1E7EW31 1015 aa16.41■□□□□ 0.22
UPK3A-201ENST00000216211 MEFVO15553 781 aaPredicted RBP16.41■□□□□ 0.22
UPK3A-201ENST00000216211 XYLBO75191 536 aa16.41■□□□□ 0.22
UPK3A-201ENST00000216211 PLS3P13797 630 aa16.41■□□□□ 0.22
UPK3A-201ENST00000216211 KCNE1P15382 129 aa16.41■□□□□ 0.22
UPK3A-201ENST00000216211 RFX1P22670 979 aa16.41■□□□□ 0.22
UPK3A-201ENST00000216211 CACNB1Q02641 598 aaPredicted RBP16.41■□□□□ 0.22
UPK3A-201ENST00000216211 STRN3Q13033 797 aa16.41■□□□□ 0.22
UPK3A-201ENST00000216211 UVSSAQ2YD98 709 aa16.41■□□□□ 0.22
UPK3A-201ENST00000216211 SEZ6Q53EL9 994 aa16.41■□□□□ 0.22
UPK3A-201ENST00000216211 PARM1Q6UWI2 310 aa16.41■□□□□ 0.22
UPK3A-201ENST00000216211 ANKS3Q6ZW76 656 aa16.41■□□□□ 0.22
UPK3A-201ENST00000216211 CCDC105Q8IYK2 499 aa16.41■□□□□ 0.22
UPK3A-201ENST00000216211 TMEM161BQ8NDZ6 487 aa16.41■□□□□ 0.22
UPK3A-201ENST00000216211 FGF14Q92915 247 aa16.41■□□□□ 0.22
UPK3A-201ENST00000216211 C18orf25Q96B23 403 aaPredicted RBP16.41■□□□□ 0.22
UPK3A-201ENST00000216211 RPP25Q9BUL9 199 aaKnown RBP16.41■□□□□ 0.22
UPK3A-201ENST00000216211 SLC38A7Q9NVC3 462 aa16.41■□□□□ 0.22
UPK3A-201ENST00000216211 CNTN3Q9P232 1028 aa16.41■□□□□ 0.22
UPK3A-201ENST00000216211 ANKFY1Q9P2R3 1169 aa16.41■□□□□ 0.22
UPK3A-201ENST00000216211 DNMT3BQ9UBC3 853 aaKnown RBP16.41■□□□□ 0.22
UPK3A-201ENST00000216211 CDH7Q9ULB5 785 aa16.41■□□□□ 0.22
UPK3A-201ENST00000216211 BACE2Q9Y5Z0 518 aa16.41■□□□□ 0.22
UPK3A-201ENST00000216211 ZFP37Q9Y6Q3 630 aaPredicted RBP16.41■□□□□ 0.22
UPK3A-201ENST00000216211 ANK1P16157 1881 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms