RNA–Protein interactions for RNA: ENST00000055335.10

PPP1R3F-201, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PPP1R3F, Length 3,421 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-201ENST00000055335 IFNB1P01574 187 aa21.36■■□□□ 1.01
PPP1R3F-201ENST00000055335 ZSCAN5DPP0CG00 497 aa21.36■■□□□ 1.01
PPP1R3F-201ENST00000055335 SHMT1P34896 483 aa21.36■■□□□ 1.01
PPP1R3F-201ENST00000055335 RBM5P52756 815 aaKnown RBP eCLIP21.36■■□□□ 1.01
PPP1R3F-201ENST00000055335 SPARCL1Q14515 664 aa21.36■■□□□ 1.01
PPP1R3F-201ENST00000055335 RASA3Q14644 834 aa21.36■■□□□ 1.01
PPP1R3F-201ENST00000055335 P3H1Q32P28 736 aa21.36■■□□□ 1.01
PPP1R3F-201ENST00000055335 ARMC3Q5W041 872 aa21.36■■□□□ 1.01
PPP1R3F-201ENST00000055335 ZFPM1Q8IX07 1006 aa21.36■■□□□ 1.01
PPP1R3F-201ENST00000055335 CPA5Q8WXQ8 436 aa21.36■■□□□ 1.01
PPP1R3F-201ENST00000055335 SMC6Q96SB8 1091 aa21.36■■□□□ 1.01
PPP1R3F-201ENST00000055335 LRRC4BQ9NT99 713 aa21.36■■□□□ 1.01
PPP1R3F-201ENST00000055335 A6NHS1 94 aa21.36■■□□□ 1.01
PPP1R3F-201ENST00000055335 CD58P19256 250 aa21.36■■□□□ 1.01
PPP1R3F-201ENST00000055335 KHDC1Q4VXA5 237 aaKnown RBP21.36■■□□□ 1.01
PPP1R3F-201ENST00000055335 C1orf186Q6ZWK4 172 aa21.36■■□□□ 1.01
PPP1R3F-201ENST00000055335 AMIGO3Q86WK7 504 aa21.36■■□□□ 1.01
PPP1R3F-201ENST00000055335 RREB1Q92766 1687 aa21.36■■□□□ 1.01
PPP1R3F-201ENST00000055335 PI4K2BG5E9Z4 385 aa21.36■■□□□ 1.01
PPP1R3F-201ENST00000055335 HLA-DOAP06340 250 aa21.36■■□□□ 1.01
PPP1R3F-201ENST00000055335 MAGEA4P43358 317 aa21.36■■□□□ 1.01
PPP1R3F-201ENST00000055335 RCN1Q15293 331 aa21.36■■□□□ 1.01
PPP1R3F-201ENST00000055335 LRRC19Q9H756 370 aa21.36■■□□□ 1.01
PPP1R3F-201ENST00000055335 PLS3P13797 630 aa21.35■■□□□ 1.01
PPP1R3F-201ENST00000055335 CDR2Q01850 454 aa21.35■■□□□ 1.01
PPP1R3F-201ENST00000055335 PLCB3Q01970 1234 aa21.35■■□□□ 1.01
PPP1R3F-201ENST00000055335 FASTKD3Q14CZ7 662 aaKnown RBP21.35■■□□□ 1.01
PPP1R3F-201ENST00000055335 FAM20AQ96MK3 541 aa21.35■■□□□ 1.01
PPP1R3F-201ENST00000055335 TMEM117Q9H0C3 514 aa21.35■■□□□ 1.01
PPP1R3F-201ENST00000055335 GNAZP19086 355 aa21.35■■□□□ 1.01
PPP1R3F-201ENST00000055335 NBPF20Q3BBV1 942 aa21.35■■□□□ 1.01
PPP1R3F-201ENST00000055335 LRMDAQ9H2I8 198 aa21.35■■□□□ 1.01
PPP1R3F-201ENST00000055335 NARFQ9UHQ1 456 aa21.35■■□□□ 1.01
PPP1R3F-201ENST00000055335 VAV3Q9UKW4 847 aa21.35■■□□□ 1.01
PPP1R3F-201ENST00000055335 NVLO15381 856 aaKnown RBP21.35■■□□□ 1.01
PPP1R3F-201ENST00000055335 BANF1O75531 89 aa21.35■■□□□ 1.01
PPP1R3F-201ENST00000055335 VPS52Q8N1B4 723 aa21.35■■□□□ 1.01
PPP1R3F-201ENST00000055335 MCUR1Q96AQ8 359 aa21.35■■□□□ 1.01
PPP1R3F-201ENST00000055335 DDX50Q9BQ39 737 aaKnown RBP21.35■■□□□ 1.01
PPP1R3F-201ENST00000055335 PI4K2AQ9BTU6 479 aa21.35■■□□□ 1.01
PPP1R3F-201ENST00000055335 MKNK1Q9BUB5 465 aa21.35■■□□□ 1.01
PPP1R3F-201ENST00000055335 WRAP73Q9P2S5 460 aaPredicted RBP21.35■■□□□ 1.01
PPP1R3F-201ENST00000055335 ZNF335Q9H4Z2 1342 aaPredicted RBP21.34■■□□□ 1.01
PPP1R3F-201ENST00000055335 A0A1W2PPM1 405 aa21.34■■□□□ 1.01
PPP1R3F-201ENST00000055335 ATF7P17544 494 aaPredicted RBP21.34■■□□□ 1.01
PPP1R3F-201ENST00000055335 ATP6V1C1P21283 382 aa21.34■■□□□ 1.01
PPP1R3F-201ENST00000055335 CPA2P48052 419 aa21.34■■□□□ 1.01
PPP1R3F-201ENST00000055335 SLC1A5Q15758 541 aa21.34■■□□□ 1.01
PPP1R3F-201ENST00000055335 TMEM63BQ5T3F8 832 aa21.34■■□□□ 1.01
PPP1R3F-201ENST00000055335 DSTYKQ6XUX3 929 aa21.34■■□□□ 1.01
PPP1R3F-201ENST00000055335 CCDC125Q86Z20 511 aa21.34■■□□□ 1.01
PPP1R3F-201ENST00000055335 ANKMY2Q8IV38 441 aa21.34■■□□□ 1.01
PPP1R3F-201ENST00000055335 GRAMD1AQ96CP6 724 aa21.34■■□□□ 1.01
PPP1R3F-201ENST00000055335 G3V3G9 751 aa21.34■■□□□ 1.01
PPP1R3F-201ENST00000055335 DCTN3O75935 186 aa21.34■■□□□ 1.01
PPP1R3F-201ENST00000055335 ETS1P14921 441 aa21.34■■□□□ 1.01
PPP1R3F-201ENST00000055335 RASSF2P50749 326 aa21.34■■□□□ 1.01
PPP1R3F-201ENST00000055335 NOP14P78316 857 aaKnown RBP21.34■■□□□ 1.01
PPP1R3F-201ENST00000055335 CYP1B1Q16678 543 aa21.34■■□□□ 1.01
PPP1R3F-201ENST00000055335 DCAF8Q5TAQ9 597 aa21.34■■□□□ 1.01
PPP1R3F-201ENST00000055335 NLRP9Q7RTR0 991 aa21.34■■□□□ 1.01
PPP1R3F-201ENST00000055335 PASD1Q8IV76 773 aa21.34■■□□□ 1.01
PPP1R3F-201ENST00000055335 LMO3Q8TAP4 145 aa21.34■■□□□ 1.01
PPP1R3F-201ENST00000055335 CD101Q93033 1021 aa21.34■■□□□ 1.01
PPP1R3F-201ENST00000055335 SLC7A6OSQ96CW6 309 aaPredicted RBP21.34■■□□□ 1.01
PPP1R3F-201ENST00000055335 GRID1Q9ULK0 1009 aa21.34■■□□□ 1.01
PPP1R3F-201ENST00000055335 CYP3A7-CYP3A51PA0A087WV96 503 aa21.33■■□□□ 1.01
PPP1R3F-201ENST00000055335 EIF3DO15371 548 aaKnown RBP eCLIP21.33■■□□□ 1.01
PPP1R3F-201ENST00000055335 T-ENOLP0DO92 83 aa21.33■■□□□ 1.01
PPP1R3F-201ENST00000055335 CYP3A7P24462 503 aa21.33■■□□□ 1.01
PPP1R3F-201ENST00000055335 PIK3CAP42336 1068 aa21.33■■□□□ 1.01
PPP1R3F-201ENST00000055335 FMO1Q01740 532 aa21.33■■□□□ 1.01
PPP1R3F-201ENST00000055335 DOK7Q18PE1 504 aa21.33■■□□□ 1.01
PPP1R3F-201ENST00000055335 FAM182AQ5T1J6 154 aa21.33■■□□□ 1.01
PPP1R3F-201ENST00000055335 CCDC174Q6PII3 467 aa21.33■■□□□ 1.01
PPP1R3F-201ENST00000055335 TEX9Q8N6V9 391 aa21.33■■□□□ 1.01
PPP1R3F-201ENST00000055335 TOPORSQ9NS56 1045 aaPredicted RBP21.33■■□□□ 1.01
PPP1R3F-201ENST00000055335 NMRK1Q9NWW6 199 aa21.33■■□□□ 1.01
PPP1R3F-201ENST00000055335 ZNF148Q9UQR1 794 aa21.33■■□□□ 1.01
PPP1R3F-201ENST00000055335 SCN7AQ01118 1682 aa21.33■■□□□ 1.01
PPP1R3F-201ENST00000055335 KRT36O76013 467 aa21.33■■□□□ 1.01
PPP1R3F-201ENST00000055335 PECAM1P16284 738 aaPredicted RBP21.33■■□□□ 1.01
PPP1R3F-201ENST00000055335 MRPS35P82673 323 aaKnown RBP21.33■■□□□ 1.01
PPP1R3F-201ENST00000055335 GABPAQ06546 454 aa21.33■■□□□ 1.01
PPP1R3F-201ENST00000055335 AP3B2Q13367 1082 aa21.33■■□□□ 1.01
PPP1R3F-201ENST00000055335 C11orf91Q3C1V1 193 aa21.33■■□□□ 1.01
PPP1R3F-201ENST00000055335 LVRNQ6Q4G3 990 aa21.33■■□□□ 1.01
PPP1R3F-201ENST00000055335 ATL2Q8NHH9 583 aa21.33■■□□□ 1.01
PPP1R3F-201ENST00000055335 LRRC42Q9Y546 428 aa21.33■■□□□ 1.01
PPP1R3F-201ENST00000055335 KREMEN1Q96MU8 473 aa21.33■■□□□ 1
PPP1R3F-201ENST00000055335 TRIM4Q9C037 500 aa21.33■■□□□ 1
PPP1R3F-201ENST00000055335 DCLK3Q9C098 648 aa21.33■■□□□ 1
PPP1R3F-201ENST00000055335 GLT8D2Q9H1C3 349 aa21.33■■□□□ 1
PPP1R3F-201ENST00000055335 TMEM150BA6NC51 233 aa21.32■■□□□ 1
PPP1R3F-201ENST00000055335 UBTFL6P0CB48 400 aaPredicted RBP21.32■■□□□ 1
PPP1R3F-201ENST00000055335 KRT10P13645 584 aa21.32■■□□□ 1
PPP1R3F-201ENST00000055335 CYP11B1P15538 503 aa21.32■■□□□ 1
PPP1R3F-201ENST00000055335 IVDP26440 423 aa21.32■■□□□ 1
PPP1R3F-201ENST00000055335 SNX30Q5VWJ9 437 aa21.32■■□□□ 1
PPP1R3F-201ENST00000055335 PCNX4Q63HM2 1172 aa21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms