RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 CDR2Q01850 454 aa14.05□□□□□ -0.16
CTNS-201ENST00000046640 MTMR3Q13615 1198 aa14.05□□□□□ -0.16
CTNS-201ENST00000046640 GNPTABQ3T906 1256 aa14.05□□□□□ -0.16
CTNS-201ENST00000046640 MIS18BP1Q6P0N0 1132 aa14.05□□□□□ -0.16
CTNS-201ENST00000046640 JAMLQ86YT9 394 aa14.05□□□□□ -0.16
CTNS-201ENST00000046640 FBXO25Q8TCJ0 367 aa14.05□□□□□ -0.16
CTNS-201ENST00000046640 ATP8B4Q8TF62 1192 aa14.05□□□□□ -0.16
CTNS-201ENST00000046640 AZI2Q9H6S1 392 aa14.05□□□□□ -0.16
CTNS-201ENST00000046640 ZNF302Q9NR11 478 aa14.05□□□□□ -0.16
CTNS-201ENST00000046640 GJB6O95452 261 aa14.04□□□□□ -0.16
CTNS-201ENST00000046640 EDN1P05305 212 aa14.04□□□□□ -0.16
CTNS-201ENST00000046640 CHN1P15882 459 aa14.04□□□□□ -0.16
CTNS-201ENST00000046640 FGFR4P22455 802 aa14.04□□□□□ -0.16
CTNS-201ENST00000046640 STRN3Q13033 797 aa14.04□□□□□ -0.16
CTNS-201ENST00000046640 C6orf89Q6UWU4 347 aa14.04□□□□□ -0.16
CTNS-201ENST00000046640 ZBTB33Q86T24 672 aa14.04□□□□□ -0.16
CTNS-201ENST00000046640 NCAPG2Q86XI2 1143 aa14.04□□□□□ -0.16
CTNS-201ENST00000046640 MCPH1Q8NEM0 835 aa14.04□□□□□ -0.16
CTNS-201ENST00000046640 MGARPQ8TDB4 240 aa14.04□□□□□ -0.16
CTNS-201ENST00000046640 C1orf54Q8WWF1 131 aa14.04□□□□□ -0.16
CTNS-201ENST00000046640 FBXO40Q9UH90 709 aa14.04□□□□□ -0.16
CTNS-201ENST00000046640 ANAPC7Q9UJX3 599 aa14.04□□□□□ -0.16
CTNS-201ENST00000046640 KIAA1217Q5T5P2 1943 aa14.04□□□□□ -0.16
CTNS-201ENST00000046640 SPATA31C2B4DYI2 1134 aa14.04□□□□□ -0.16
CTNS-201ENST00000046640 K7ERI5 159 aa14.04□□□□□ -0.16
CTNS-201ENST00000046640 CLDN3O15551 220 aa14.04□□□□□ -0.16
CTNS-201ENST00000046640 SUPT20HL2P0C7V6 817 aa14.04□□□□□ -0.16
CTNS-201ENST00000046640 PEX5P50542 639 aa14.04□□□□□ -0.16
CTNS-201ENST00000046640 SLC29A2Q14542 456 aa14.04□□□□□ -0.16
CTNS-201ENST00000046640 STXBP2Q15833 593 aa14.04□□□□□ -0.16
CTNS-201ENST00000046640 SUPT20HL1Q3ZLR7 823 aa14.04□□□□□ -0.16
CTNS-201ENST00000046640 BRDTQ58F21 947 aaPredicted RBP14.04□□□□□ -0.16
CTNS-201ENST00000046640 TAX1BP1Q86VP1 789 aa14.04□□□□□ -0.16
CTNS-201ENST00000046640 CCDC105Q8IYK2 499 aa14.04□□□□□ -0.16
CTNS-201ENST00000046640 DEPTORQ8TB45 409 aa14.04□□□□□ -0.16
CTNS-201ENST00000046640 SPIRE2Q8WWL2 714 aa14.04□□□□□ -0.16
CTNS-201ENST00000046640 DDX1Q92499 740 aaKnown RBP14.04□□□□□ -0.16
CTNS-201ENST00000046640 ZBTB10Q96DT7 871 aa14.04□□□□□ -0.16
CTNS-201ENST00000046640 ERP44Q9BS26 406 aa14.04□□□□□ -0.16
CTNS-201ENST00000046640 PDLIM7Q9NR12 457 aa14.04□□□□□ -0.16
CTNS-201ENST00000046640 C1orf112Q9NSG2 853 aa14.04□□□□□ -0.16
CTNS-201ENST00000046640 ZNF112Q9UJU3 913 aa14.04□□□□□ -0.16
CTNS-201ENST00000046640 AGO2Q9UKV8 859 aaKnown RBP14.04□□□□□ -0.16
CTNS-201ENST00000046640 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.04□□□□□ -0.16
CTNS-201ENST00000046640 COL11A1P12107 1806 aaPredicted RBP14.04□□□□□ -0.16
CTNS-201ENST00000046640 FOXO6A8MYZ6 492 aa14.03□□□□□ -0.16
CTNS-201ENST00000046640 RRM1P23921 792 aa14.03□□□□□ -0.16
CTNS-201ENST00000046640 PIK3CAP42336 1068 aa14.03□□□□□ -0.16
CTNS-201ENST00000046640 BYSLQ13895 437 aaKnown RBP14.03□□□□□ -0.16
CTNS-201ENST00000046640 XKR3Q5GH77 459 aa14.03□□□□□ -0.16
CTNS-201ENST00000046640 SEL1L2Q5TEA6 688 aa14.03□□□□□ -0.16
CTNS-201ENST00000046640 GKAP1Q5VSY0 366 aaPredicted RBP14.03□□□□□ -0.16
CTNS-201ENST00000046640 TDRD10Q5VZ19 366 aaKnown RBP14.03□□□□□ -0.16
CTNS-201ENST00000046640 CCDC137Q6PK04 289 aaKnown RBP14.03□□□□□ -0.16
CTNS-201ENST00000046640 SAMD3Q8N6K7 520 aa14.03□□□□□ -0.16
CTNS-201ENST00000046640 MTFR1LQ9H019 292 aa14.03□□□□□ -0.16
CTNS-201ENST00000046640 MLXIPLQ9NP71 852 aa14.03□□□□□ -0.16
CTNS-201ENST00000046640 FAM114A2Q9NRY5 505 aa14.03□□□□□ -0.16
CTNS-201ENST00000046640 DNAJC17Q9NVM6 304 aaKnown RBP14.03□□□□□ -0.16
CTNS-201ENST00000046640 HOXC10Q9NYD6 342 aa14.03□□□□□ -0.16
CTNS-201ENST00000046640 O00370 1275 aa14.03□□□□□ -0.16
CTNS-201ENST00000046640 MAFGO15525 162 aa14.03□□□□□ -0.16
CTNS-201ENST00000046640 GRIN3BO60391 1043 aa14.03□□□□□ -0.16
CTNS-201ENST00000046640 HLA-DRAP01903 254 aa14.03□□□□□ -0.16
CTNS-201ENST00000046640 GLRA2P23416 452 aa14.03□□□□□ -0.16
CTNS-201ENST00000046640 SSR1P43307 286 aaKnown RBP14.03□□□□□ -0.16
CTNS-201ENST00000046640 TRIP13Q15645 432 aaPredicted RBP14.03□□□□□ -0.16
CTNS-201ENST00000046640 ANKRD20A8PQ5CZ79 823 aa14.03□□□□□ -0.16
CTNS-201ENST00000046640 CDR2LQ86X02 465 aaPredicted RBP14.03□□□□□ -0.16
CTNS-201ENST00000046640 TRIM50Q86XT4 487 aa14.03□□□□□ -0.16
CTNS-201ENST00000046640 FBXL18Q96ME1 805 aa14.03□□□□□ -0.16
CTNS-201ENST00000046640 TCHPQ9BT92 498 aa14.03□□□□□ -0.16
CTNS-201ENST00000046640 SEMA4AQ9H3S1 761 aa14.03□□□□□ -0.16
CTNS-201ENST00000046640 BTBD7Q9P203 1132 aa14.03□□□□□ -0.16
CTNS-201ENST00000046640 ARHGAP28Q9P2N2 729 aa14.03□□□□□ -0.16
CTNS-201ENST00000046640 ADAMTS5Q9UNA0 930 aa14.03□□□□□ -0.16
CTNS-201ENST00000046640 COQ4Q9Y3A0 265 aa14.03□□□□□ -0.16
CTNS-201ENST00000046640 UMODL1Q5DID0 1318 aa14.03□□□□□ -0.16
CTNS-201ENST00000046640 C19orf81C9J6K1 198 aa14.02□□□□□ -0.16
CTNS-201ENST00000046640 MAPK13O15264 365 aa14.02□□□□□ -0.16
CTNS-201ENST00000046640 VIMP08670 466 aaKnown RBP14.02□□□□□ -0.16
CTNS-201ENST00000046640 FDX1P10109 184 aa14.02□□□□□ -0.16
CTNS-201ENST00000046640 RARAP10276 462 aa14.02□□□□□ -0.16
CTNS-201ENST00000046640 GZMAP12544 262 aa14.02□□□□□ -0.16
CTNS-201ENST00000046640 PMS2P54278 862 aa14.02□□□□□ -0.16
CTNS-201ENST00000046640 LY6KQ17RY6 165 aa14.02□□□□□ -0.16
CTNS-201ENST00000046640 ZNF394Q53GI3 561 aa14.02□□□□□ -0.16
CTNS-201ENST00000046640 EMC10Q5UCC4 262 aa14.02□□□□□ -0.16
CTNS-201ENST00000046640 C11orf63Q6NUN7 778 aa14.02□□□□□ -0.16
CTNS-201ENST00000046640 TMEM270Q6UE05 265 aa14.02□□□□□ -0.16
CTNS-201ENST00000046640 GADL1Q6ZQY3 521 aa14.02□□□□□ -0.16
CTNS-201ENST00000046640 TMC2Q8TDI7 906 aa14.02□□□□□ -0.16
CTNS-201ENST00000046640 EPS8L3Q8TE67 593 aaKnown RBP14.02□□□□□ -0.16
CTNS-201ENST00000046640 ATG4AQ8WYN0 398 aa14.02□□□□□ -0.16
CTNS-201ENST00000046640 RNF25Q96BH1 459 aaPredicted RBP14.02□□□□□ -0.16
CTNS-201ENST00000046640 TBC1D31Q96DN5 1066 aa14.02□□□□□ -0.16
CTNS-201ENST00000046640 NAP1L3Q99457 506 aaPredicted RBP14.02□□□□□ -0.16
CTNS-201ENST00000046640 SENP7Q9BQF6 1050 aa14.02□□□□□ -0.16
CTNS-201ENST00000046640 HEMGNQ9BXL5 484 aa14.02□□□□□ -0.16
CTNS-201ENST00000046640 TTC7AQ9ULT0 858 aaPredicted RBP14.02□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms