RNA–Protein interactions for RNA: ENST00000023939.8

RTFDC1-201, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-201ENST00000023939 CLTAP09496 248 aa15.38■□□□□ 0.05
RTFDC1-201ENST00000023939 ACO1P21399 889 aaKnown RBP15.38■□□□□ 0.05
RTFDC1-201ENST00000023939 MCM3P25205 808 aa15.38■□□□□ 0.05
RTFDC1-201ENST00000023939 TNFSF9P41273 254 aa15.38■□□□□ 0.05
RTFDC1-201ENST00000023939 IGBP1P78318 339 aa15.38■□□□□ 0.05
RTFDC1-201ENST00000023939 GPC5P78333 572 aa15.38■□□□□ 0.05
RTFDC1-201ENST00000023939 PPFIA1Q13136 1202 aa15.38■□□□□ 0.05
RTFDC1-201ENST00000023939 CUL2Q13617 745 aa15.38■□□□□ 0.05
RTFDC1-201ENST00000023939 AMHR2Q16671 573 aa15.38■□□□□ 0.05
RTFDC1-201ENST00000023939 KYAT1Q16773 422 aa15.38■□□□□ 0.05
RTFDC1-201ENST00000023939 ZNF568Q3ZCX4 644 aa15.38■□□□□ 0.05
RTFDC1-201ENST00000023939 CC2D1AQ6P1N0 951 aaPredicted RBP15.38■□□□□ 0.05
RTFDC1-201ENST00000023939 ZBTB33Q86T24 672 aa15.38■□□□□ 0.05
RTFDC1-201ENST00000023939 IFNL1Q8IU54 200 aa15.38■□□□□ 0.05
RTFDC1-201ENST00000023939 SPATA4Q8NEY3 305 aa15.38■□□□□ 0.05
RTFDC1-201ENST00000023939 RUBCNQ92622 972 aa15.38■□□□□ 0.05
RTFDC1-201ENST00000023939 PNKPQ96T60 521 aa15.38■□□□□ 0.05
RTFDC1-201ENST00000023939 THAP2Q9H0W7 228 aa15.38■□□□□ 0.05
RTFDC1-201ENST00000023939 MINDY3Q9H8M7 445 aa15.38■□□□□ 0.05
RTFDC1-201ENST00000023939 APOBEC3GQ9HC16 384 aaKnown RBP15.38■□□□□ 0.05
RTFDC1-201ENST00000023939 SEPT11Q9NVA2 429 aaKnown RBP15.38■□□□□ 0.05
RTFDC1-201ENST00000023939 PCDHB2Q9Y5E7 798 aa15.38■□□□□ 0.05
RTFDC1-201ENST00000023939 TMCO5BA8MYB1 307 aa15.37■□□□□ 0.05
RTFDC1-201ENST00000023939 IL18RAPO95256 599 aa15.37■□□□□ 0.05
RTFDC1-201ENST00000023939 ASS1P00966 412 aaKnown RBP15.37■□□□□ 0.05
RTFDC1-201ENST00000023939 MCF2P10911 925 aa15.37■□□□□ 0.05
RTFDC1-201ENST00000023939 HARSP12081 509 aaKnown RBP15.37■□□□□ 0.05
RTFDC1-201ENST00000023939 NCOA4Q13772 614 aa15.37■□□□□ 0.05
RTFDC1-201ENST00000023939 GRIK4Q16099 956 aa15.37■□□□□ 0.05
RTFDC1-201ENST00000023939 DUOXA2Q1HG44 320 aa15.37■□□□□ 0.05
RTFDC1-201ENST00000023939 MARCH8Q5T0T0 291 aa15.37■□□□□ 0.05
RTFDC1-201ENST00000023939 CCDC181Q5TID7 509 aa15.37■□□□□ 0.05
RTFDC1-201ENST00000023939 NT5DC3Q86UY8 548 aa15.37■□□□□ 0.05
RTFDC1-201ENST00000023939 ZNF410Q86VK4 478 aa15.37■□□□□ 0.05
RTFDC1-201ENST00000023939 TAF4BQ92750 862 aa15.37■□□□□ 0.05
RTFDC1-201ENST00000023939 ARHGEF26Q96DR7 871 aa15.37■□□□□ 0.05
RTFDC1-201ENST00000023939 CDT1Q9H211 546 aa15.37■□□□□ 0.05
RTFDC1-201ENST00000023939 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.37■□□□□ 0.052e-6■■■■■ 89.4
RTFDC1-201ENST00000023939 FAM53CQ9NYF3 392 aa15.37■□□□□ 0.05
RTFDC1-201ENST00000023939 Q9Y3F1 56 aa15.37■□□□□ 0.05
RTFDC1-201ENST00000023939 PASKQ96RG2 1323 aa15.37■□□□□ 0.05
RTFDC1-201ENST00000023939 B4GALT5O43286 388 aa15.37■□□□□ 0.05
RTFDC1-201ENST00000023939 ADCY6O43306 1168 aa15.37■□□□□ 0.05
RTFDC1-201ENST00000023939 ZEB2O60315 1214 aa15.37■□□□□ 0.05
RTFDC1-201ENST00000023939 MMEP08473 750 aa15.37■□□□□ 0.05
RTFDC1-201ENST00000023939 RHOXF2BP0C7M4 288 aa15.37■□□□□ 0.05
RTFDC1-201ENST00000023939 IQCF3P0C7M6 154 aa15.37■□□□□ 0.05
RTFDC1-201ENST00000023939 ZNF865P0CJ78 1059 aaPredicted RBP15.37■□□□□ 0.05
RTFDC1-201ENST00000023939 CXCR5P32302 372 aa15.37■□□□□ 0.05
RTFDC1-201ENST00000023939 NOP14P78316 857 aaKnown RBP15.37■□□□□ 0.05
RTFDC1-201ENST00000023939 CDC42EP1Q00587 391 aa15.37■□□□□ 0.05
RTFDC1-201ENST00000023939 SEZ6Q53EL9 994 aa15.37■□□□□ 0.05
RTFDC1-201ENST00000023939 EEF1DP3Q658K8 133 aa15.37■□□□□ 0.05
RTFDC1-201ENST00000023939 C11orf63Q6NUN7 778 aa15.37■□□□□ 0.05
RTFDC1-201ENST00000023939 PEX26Q7Z412 305 aa15.37■□□□□ 0.05
RTFDC1-201ENST00000023939 UBR7Q8N806 425 aa15.37■□□□□ 0.05
RTFDC1-201ENST00000023939 SOCS4Q8WXH5 440 aa15.37■□□□□ 0.05
RTFDC1-201ENST00000023939 ZBTB10Q96DT7 871 aa15.37■□□□□ 0.05
RTFDC1-201ENST00000023939 HES6Q96HZ4 224 aa15.37■□□□□ 0.05
RTFDC1-201ENST00000023939 FAM84AQ96KN4 292 aa15.37■□□□□ 0.05
RTFDC1-201ENST00000023939 RHOXF2Q9BQY4 288 aa15.37■□□□□ 0.05
RTFDC1-201ENST00000023939 ARFGAP3Q9NP61 516 aa15.37■□□□□ 0.05
RTFDC1-201ENST00000023939 A0A087WZ62 844 aa15.36■□□□□ 0.05
RTFDC1-201ENST00000023939 BUB1BO60566 1050 aaPredicted RBP15.36■□□□□ 0.05
RTFDC1-201ENST00000023939 PHACTR2O75167 634 aa15.36■□□□□ 0.05
RTFDC1-201ENST00000023939 F2P00734 622 aa15.36■□□□□ 0.05
RTFDC1-201ENST00000023939 CYP1A2P05177 515 aa15.36■□□□□ 0.05
RTFDC1-201ENST00000023939 KRT5P13647 590 aa15.36■□□□□ 0.05
RTFDC1-201ENST00000023939 ABCB4P21439 1286 aa15.36■□□□□ 0.05
RTFDC1-201ENST00000023939 RGS2P41220 211 aa15.36■□□□□ 0.05
RTFDC1-201ENST00000023939 TAF3Q5VWG9 929 aa15.36■□□□□ 0.05
RTFDC1-201ENST00000023939 ACAD10Q6JQN1 1059 aa15.36■□□□□ 0.05
RTFDC1-201ENST00000023939 DAAM2Q86T65 1068 aa15.36■□□□□ 0.05
RTFDC1-201ENST00000023939 FAXDC2Q96IV6 333 aa15.36■□□□□ 0.05
RTFDC1-201ENST00000023939 PSMB7Q99436 277 aa15.36■□□□□ 0.05
RTFDC1-201ENST00000023939 ARID3AQ99856 593 aa15.36■□□□□ 0.05
RTFDC1-201ENST00000023939 FDXACB1Q9BRP7 624 aaPredicted RBP15.36■□□□□ 0.05
RTFDC1-201ENST00000023939 IMPG2Q9BZV3 1241 aa15.36■□□□□ 0.05
RTFDC1-201ENST00000023939 OSGEPQ9NPF4 335 aa15.36■□□□□ 0.05
RTFDC1-201ENST00000023939 GTF3C4Q9UKN8 822 aa15.36■□□□□ 0.05
RTFDC1-201ENST00000023939 AKT3Q9Y243 479 aa15.36■□□□□ 0.05
RTFDC1-201ENST00000023939 NUB1Q9Y5A7 615 aa15.36■□□□□ 0.05
RTFDC1-201ENST00000023939 TULP1O00294 542 aaPredicted RBP15.35■□□□□ 0.05
RTFDC1-201ENST00000023939 ERLIN1O75477 346 aa15.35■□□□□ 0.05
RTFDC1-201ENST00000023939 CLEC16AQ2KHT3 1053 aa15.35■□□□□ 0.05
RTFDC1-201ENST00000023939 SGSM1Q2NKQ1 1148 aa15.35■□□□□ 0.05
RTFDC1-201ENST00000023939 GLE1Q53GS7 698 aaKnown RBP15.35■□□□□ 0.05
RTFDC1-201ENST00000023939 CCDC70Q6NSX1 233 aa15.35■□□□□ 0.05
RTFDC1-201ENST00000023939 TRIM72Q6ZMU5 477 aa15.35■□□□□ 0.05
RTFDC1-201ENST00000023939 KIAA0319LQ8IZA0 1049 aa15.35■□□□□ 0.05
RTFDC1-201ENST00000023939 ACTRT1Q8TDG2 376 aa15.35■□□□□ 0.05
RTFDC1-201ENST00000023939 APBA2Q99767 749 aa15.35■□□□□ 0.05
RTFDC1-201ENST00000023939 ZFYVE28Q9HCC9 887 aa15.35■□□□□ 0.05
RTFDC1-201ENST00000023939 ACP6Q9NPH0 428 aa15.35■□□□□ 0.05
RTFDC1-201ENST00000023939 FLRT1Q9NZU1 646 aa15.35■□□□□ 0.05
RTFDC1-201ENST00000023939 GJD2Q9UKL4 321 aa15.35■□□□□ 0.05
RTFDC1-201ENST00000023939 AMFRQ9UKV5 643 aa15.35■□□□□ 0.05
RTFDC1-201ENST00000023939 COG5Q9UP83 839 aa15.35■□□□□ 0.05
RTFDC1-201ENST00000023939 FAM155AB1AL88 458 aaPredicted RBP15.34■□□□□ 0.05
RTFDC1-201ENST00000023939 ZNF132P52740 706 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms