RNA–Protein interactions for RNA: ENSMUST00000190193.7

Col6a5-203, Transcript of Collagen alpha-5(VI) chain, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Col6a5, Length 9,289 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5-203ENSMUST00000190193 Abhd2Q9QXM0 425 aa10.56□□□□□ -0.72
Col6a5-203ENSMUST00000190193 Vps33bP59016 617 aa10.56□□□□□ -0.72
Col6a5-203ENSMUST00000190193 Sfi1Q3UZY0 1216 aaKnown RBP10.56□□□□□ -0.72
Col6a5-203ENSMUST00000190193 Slc13a5Q67BT3 572 aa10.56□□□□□ -0.72
Col6a5-203ENSMUST00000190193 Papd5Q68ED3 633 aaKnown RBP10.56□□□□□ -0.72
Col6a5-203ENSMUST00000190193 Krt40Q6IFX3 439 aa10.56□□□□□ -0.72
Col6a5-203ENSMUST00000190193 Phf21aQ6ZPK0 659 aa10.56□□□□□ -0.72
Col6a5-203ENSMUST00000190193 Efl1Q8C0D5 1127 aa10.56□□□□□ -0.72
Col6a5-203ENSMUST00000190193 Pnma1Q8C1C8 353 aa10.56□□□□□ -0.72
Col6a5-203ENSMUST00000190193 Erich5Q8K0S2 362 aa10.56□□□□□ -0.72
Col6a5-203ENSMUST00000190193 Hars2Q99KK9 505 aa10.56□□□□□ -0.72
Col6a5-203ENSMUST00000190193 MydgfQ9CPT4 166 aa10.56□□□□□ -0.72
Col6a5-203ENSMUST00000190193 Usp14Q9JMA1 493 aaKnown RBP10.56□□□□□ -0.72
Col6a5-203ENSMUST00000190193 Pgk2P09041 417 aa10.56□□□□□ -0.72
Col6a5-203ENSMUST00000190193 Ankrd34bQ3UUF8 508 aa10.56□□□□□ -0.72
Col6a5-203ENSMUST00000190193 Ccna1Q61456 421 aa10.56□□□□□ -0.72
Col6a5-203ENSMUST00000190193 Kcna6Q61923 529 aa10.56□□□□□ -0.72
Col6a5-203ENSMUST00000190193 Xlr3bQ6P205 226 aa10.56□□□□□ -0.72
Col6a5-203ENSMUST00000190193 MbipQ99LQ1 341 aa10.56□□□□□ -0.72
Col6a5-203ENSMUST00000190193 Kidins220E9Q9B7 1793 aa10.56□□□□□ -0.72
Col6a5-203ENSMUST00000190193 Skint6A7XUZ6 1240 aa10.56□□□□□ -0.72
Col6a5-203ENSMUST00000190193 NfibP97863 570 aaKnown RBP10.56□□□□□ -0.72
Col6a5-203ENSMUST00000190193 Gm4952Q5FW57 296 aa10.56□□□□□ -0.72
Col6a5-203ENSMUST00000190193 Rasgrp4Q8BTM9 673 aa10.56□□□□□ -0.72
Col6a5-203ENSMUST00000190193 Washc5Q8C2E7 1159 aaKnown RBP10.56□□□□□ -0.72
Col6a5-203ENSMUST00000190193 Mtss1Q8R1S4 759 aa10.56□□□□□ -0.72
Col6a5-203ENSMUST00000190193 Smyd3Q9CWR2 428 aa10.56□□□□□ -0.72
Col6a5-203ENSMUST00000190193 Nup50Q9JIH2 466 aaKnown RBP10.56□□□□□ -0.72
Col6a5-203ENSMUST00000190193 Trip4Q9QXN3 581 aa10.56□□□□□ -0.72
Col6a5-203ENSMUST00000190193 Hspa1bP17879 642 aaKnown RBP10.56□□□□□ -0.72
Col6a5-203ENSMUST00000190193 Akap4Q60662 849 aa10.56□□□□□ -0.72
Col6a5-203ENSMUST00000190193 Klhl12Q8BZM0 568 aa10.56□□□□□ -0.72
Col6a5-203ENSMUST00000190193 Zcchc18Q8VD24 393 aa10.56□□□□□ -0.72
Col6a5-203ENSMUST00000190193 Prpf6Q91YR7 941 aaKnown RBP10.56□□□□□ -0.72
Col6a5-203ENSMUST00000190193 Veph1A1A535 833 aa10.56□□□□□ -0.72
Col6a5-203ENSMUST00000190193 Tfdp2Q64163 446 aa10.56□□□□□ -0.72
Col6a5-203ENSMUST00000190193 Scn3bQ8BHK2 215 aa10.56□□□□□ -0.72
Col6a5-203ENSMUST00000190193 P3h2Q8CG71 703 aa10.56□□□□□ -0.72
Col6a5-203ENSMUST00000190193 Pnma3Q8JZW8 466 aa10.56□□□□□ -0.72
Col6a5-203ENSMUST00000190193 Armcx6Q8K3A6 301 aa10.56□□□□□ -0.72
Col6a5-203ENSMUST00000190193 Anxa13Q99JG3 317 aa10.56□□□□□ -0.72
Col6a5-203ENSMUST00000190193 Zfp850J3QPC5 689 aa10.55□□□□□ -0.72
Col6a5-203ENSMUST00000190193 Ugt1a6bK9J7B2 531 aa10.55□□□□□ -0.72
Col6a5-203ENSMUST00000190193 Grk4O70291 574 aa10.55□□□□□ -0.72
Col6a5-203ENSMUST00000190193 Madcam1Q61826 405 aa10.55□□□□□ -0.72
Col6a5-203ENSMUST00000190193 Ugt1a6Q64435 531 aa10.55□□□□□ -0.72
Col6a5-203ENSMUST00000190193 Gga2Q6P5E6 603 aa10.55□□□□□ -0.72
Col6a5-203ENSMUST00000190193 Ugt1a7cQ6ZQM8 531 aa10.55□□□□□ -0.72
Col6a5-203ENSMUST00000190193 Leng8Q8CBY3 785 aaKnown RBP10.55□□□□□ -0.72
Col6a5-203ENSMUST00000190193 Itga2bQ9QUM0 1033 aa10.55□□□□□ -0.72
Col6a5-203ENSMUST00000190193 Ggps1Q9WTN0 300 aa10.55□□□□□ -0.72
Col6a5-203ENSMUST00000190193 Abcb5B5X0E4 1255 aa10.55□□□□□ -0.72
Col6a5-203ENSMUST00000190193 Ifnar1P33896 590 aa10.55□□□□□ -0.72
Col6a5-203ENSMUST00000190193 Pid1Q3UBG2 217 aa10.55□□□□□ -0.72
Col6a5-203ENSMUST00000190193 FntaQ61239 377 aa10.55□□□□□ -0.72
Col6a5-203ENSMUST00000190193 Sin3bQ62141 1098 aa10.55□□□□□ -0.72
Col6a5-203ENSMUST00000190193 Znf426Q8R1D1 550 aa10.55□□□□□ -0.72
Col6a5-203ENSMUST00000190193 Mcrs1Q99L90 462 aa10.55□□□□□ -0.72
Col6a5-203ENSMUST00000190193 Arhgef26D3YYY8 869 aa10.55□□□□□ -0.72
Col6a5-203ENSMUST00000190193 Pagr1bF6V0H0 108 aa10.55□□□□□ -0.72
Col6a5-203ENSMUST00000190193 Srp72F8VQC1 671 aa10.55□□□□□ -0.72
Col6a5-203ENSMUST00000190193 Akr1b7P21300 316 aa10.55□□□□□ -0.72
Col6a5-203ENSMUST00000190193 Msh2P43247 935 aaKnown RBP10.55□□□□□ -0.72
Col6a5-203ENSMUST00000190193 Tnfaip2Q61333 691 aa10.55□□□□□ -0.72
Col6a5-203ENSMUST00000190193 Senp6Q6P7W0 1132 aa10.55□□□□□ -0.72
Col6a5-203ENSMUST00000190193 Tlr11Q6R5P0 926 aa10.55□□□□□ -0.72
Col6a5-203ENSMUST00000190193 Cep95Q8BVV7 827 aa10.55□□□□□ -0.72
Col6a5-203ENSMUST00000190193 Fam20aQ8CID3 541 aa10.55□□□□□ -0.72
Col6a5-203ENSMUST00000190193 Ces1dQ8VCT4 565 aa10.55□□□□□ -0.72
Col6a5-203ENSMUST00000190193 Pagr1aQ99L02 253 aa10.55□□□□□ -0.72
Col6a5-203ENSMUST00000190193 Trim13Q9CYB0 407 aa10.55□□□□□ -0.72
Col6a5-203ENSMUST00000190193 Tgm5Q9D7I9 724 aa10.55□□□□□ -0.72
Col6a5-203ENSMUST00000190193 WhrnQ80VW5 918 aa10.55□□□□□ -0.72
Col6a5-203ENSMUST00000190193 PccaQ91ZA3 724 aa10.55□□□□□ -0.72
Col6a5-203ENSMUST00000190193 Tex12Q9CR81 123 aa10.55□□□□□ -0.72
Col6a5-203ENSMUST00000190193 AgtP11859 477 aa10.55□□□□□ -0.72
Col6a5-203ENSMUST00000190193 Ets2P15037 468 aa10.55□□□□□ -0.72
Col6a5-203ENSMUST00000190193 Syce2Q505B8 171 aa10.55□□□□□ -0.72
Col6a5-203ENSMUST00000190193 Ppp1r14bQ62084 147 aa10.55□□□□□ -0.72
Col6a5-203ENSMUST00000190193 Fam185aQ7TPD2 378 aa10.55□□□□□ -0.72
Col6a5-203ENSMUST00000190193 Inpp5fQ8CDA1 1132 aa10.55□□□□□ -0.72
Col6a5-203ENSMUST00000190193 Rassf7Q9DD19 359 aa10.55□□□□□ -0.72
Col6a5-203ENSMUST00000190193 Osbpl10S4R1M9 766 aa10.55□□□□□ -0.72
Col6a5-203ENSMUST00000190193 Gm11549A0A286YD83 63 aa10.55□□□□□ -0.72
Col6a5-203ENSMUST00000190193 Fam47eD3YWC7 402 aa10.55□□□□□ -0.72
Col6a5-203ENSMUST00000190193 IqcmQ149I8 489 aa10.55□□□□□ -0.72
Col6a5-203ENSMUST00000190193 Eif2s1Q6ZWX6 315 aaKnown RBP10.55□□□□□ -0.72
Col6a5-203ENSMUST00000190193 OafQ8QZR4 282 aa10.55□□□□□ -0.72
Col6a5-203ENSMUST00000190193 Ccdc77Q9CZH8 489 aa10.55□□□□□ -0.72
Col6a5-203ENSMUST00000190193 Cnbd2Q9D5U8 673 aa10.55□□□□□ -0.72
Col6a5-203ENSMUST00000190193 Tbk1Q9WUN2 729 aa10.55□□□□□ -0.72
Col6a5-203ENSMUST00000190193 Xrn1P97789 1719 aaKnown RBP10.55□□□□□ -0.72
Col6a5-203ENSMUST00000190193 MyrfQ3UR85 1138 aa10.55□□□□□ -0.72
Col6a5-203ENSMUST00000190193 Wbp4Q61048 376 aa10.55□□□□□ -0.72
Col6a5-203ENSMUST00000190193 Tmtc3Q8BRH0 920 aa10.55□□□□□ -0.72
Col6a5-203ENSMUST00000190193 Nudt12Q9DCN1 462 aa10.55□□□□□ -0.72
Col6a5-203ENSMUST00000190193 Cd2apQ9JLQ0 637 aa10.55□□□□□ -0.72
Col6a5-203ENSMUST00000190193 Trpc4Q9QUQ5 974 aa10.55□□□□□ -0.72
Col6a5-203ENSMUST00000190193 Dnajc7Q9QYI3 494 aa10.55□□□□□ -0.72
Col6a5-203ENSMUST00000190193 AglF8VPN4 1532 aa10.55□□□□□ -0.72
Retrieved 100 of 22,080 RNA–protein pairs in 36.2 ms