RNA–Protein interactions for RNA: ENSMUST00000106441.7

Trim47-202, Transcript of Tripartite motif-containing protein 47, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim47, Length 2,192 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47-202ENSMUST00000106441 IkbipQ9DBZ1 373 aa19.53■□□□□ 0.72
Trim47-202ENSMUST00000106441 Tmem174Q9DCX7 243 aa19.53■□□□□ 0.72
Trim47-202ENSMUST00000106441 Krt71Q9R0H5 524 aa19.53■□□□□ 0.72
Trim47-202ENSMUST00000106441 Wfdc16A2A5H4 111 aa19.52■□□□□ 0.72
Trim47-202ENSMUST00000106441 Patl2A2ARM1 529 aa19.52■□□□□ 0.72
Trim47-202ENSMUST00000106441 Gsg1l2M0QWL6 290 aa19.52■□□□□ 0.72
Trim47-202ENSMUST00000106441 Taf1bP97358 586 aa19.52■□□□□ 0.72
Trim47-202ENSMUST00000106441 Gpd2Q64521 727 aa19.52■□□□□ 0.72
Trim47-202ENSMUST00000106441 TwistnbQ78WZ7 330 aaKnown RBP19.52■□□□□ 0.72
Trim47-202ENSMUST00000106441 Raver2Q7TPD6 673 aa19.52■□□□□ 0.72
Trim47-202ENSMUST00000106441 Osbpl2Q8BX94 484 aa19.52■□□□□ 0.72
Trim47-202ENSMUST00000106441 Trim47Q8C0E3 641 aa19.52■□□□□ 0.72
Trim47-202ENSMUST00000106441 Btbd9Q8C726 612 aa19.52■□□□□ 0.72
Trim47-202ENSMUST00000106441 Dnajc28Q8VCE1 385 aa19.52■□□□□ 0.72
Trim47-202ENSMUST00000106441 SncbQ91ZZ3 133 aa19.52■□□□□ 0.72
Trim47-202ENSMUST00000106441 RragcQ99K70 398 aa19.52■□□□□ 0.72
Trim47-202ENSMUST00000106441 Asb11Q9CQ31 323 aa19.52■□□□□ 0.72
Trim47-202ENSMUST00000106441 Myh11O08638 1972 aa19.52■□□□□ 0.71
Trim47-202ENSMUST00000106441 Gm382B1AXN3 1250 aa19.51■□□□□ 0.71
Trim47-202ENSMUST00000106441 Got1P05201 413 aa19.51■□□□□ 0.71
Trim47-202ENSMUST00000106441 Nploc4P60670 608 aa19.51■□□□□ 0.71
Trim47-202ENSMUST00000106441 Ctc1Q5SUQ9 1212 aa19.51■□□□□ 0.71
Trim47-202ENSMUST00000106441 Rapgefl1Q68EF8 662 aa19.51■□□□□ 0.71
Trim47-202ENSMUST00000106441 Pkn3Q8K045 878 aa19.51■□□□□ 0.71
Trim47-202ENSMUST00000106441 Znf830Q8R1N0 363 aaKnown RBP19.51■□□□□ 0.71
Trim47-202ENSMUST00000106441 Nxf1Q99JX7 618 aaKnown RBP19.51■□□□□ 0.71
Trim47-202ENSMUST00000106441 Ralgps2Q9ERD6 590 aa19.51■□□□□ 0.71
Trim47-202ENSMUST00000106441 6030498E09RikB1AX85 169 aa19.51■□□□□ 0.71
Trim47-202ENSMUST00000106441 Trdmt1O55055 415 aa19.51■□□□□ 0.71
Trim47-202ENSMUST00000106441 Casp8O89110 480 aa19.51■□□□□ 0.71
Trim47-202ENSMUST00000106441 Rit2P70425 217 aa19.51■□□□□ 0.71
Trim47-202ENSMUST00000106441 NfiaQ02780 532 aa19.51■□□□□ 0.71
Trim47-202ENSMUST00000106441 WlsQ6DID7 541 aa19.51■□□□□ 0.71
Trim47-202ENSMUST00000106441 Foxo6Q70KY4 559 aa19.51■□□□□ 0.71
Trim47-202ENSMUST00000106441 Fbxl5Q8C2S5 690 aa19.51■□□□□ 0.71
Trim47-202ENSMUST00000106441 Tmed5Q9CXE7 229 aa19.51■□□□□ 0.71
Trim47-202ENSMUST00000106441 Ssr1Q9CY50 286 aaKnown RBP19.51■□□□□ 0.71
Trim47-202ENSMUST00000106441 Zcchc8Q9CYA6 709 aaKnown RBP19.51■□□□□ 0.71
Trim47-202ENSMUST00000106441 FibpQ9JI19 357 aa19.51■□□□□ 0.71
Trim47-202ENSMUST00000106441 Kmt2eQ3UG20 1868 aa19.51■□□□□ 0.71
Trim47-202ENSMUST00000106441 Irf8P23611 424 aa19.5■□□□□ 0.71
Trim47-202ENSMUST00000106441 Pik3caP42337 1068 aa19.5■□□□□ 0.71
Trim47-202ENSMUST00000106441 SnrpfP62307 86 aaKnown RBP19.5■□□□□ 0.71
Trim47-202ENSMUST00000106441 Mier3Q3UHF3 551 aa19.5■□□□□ 0.71
Trim47-202ENSMUST00000106441 Ece1Q4PZA2 769 aa19.5■□□□□ 0.71
Trim47-202ENSMUST00000106441 Ccdc125Q5U465 500 aa19.5■□□□□ 0.71
Trim47-202ENSMUST00000106441 ChukQ60680 745 aa19.5■□□□□ 0.71
Trim47-202ENSMUST00000106441 Mcph1Q7TT79 822 aa19.5■□□□□ 0.71
Trim47-202ENSMUST00000106441 Llgl1Q80Y17 1036 aa19.5■□□□□ 0.71
Trim47-202ENSMUST00000106441 PolrmtQ8BKF1 1207 aaKnown RBP19.5■□□□□ 0.71
Trim47-202ENSMUST00000106441 Dpp9Q8BVG4 862 aa19.5■□□□□ 0.71
Trim47-202ENSMUST00000106441 Rbp7Q9EPC5 134 aa19.5■□□□□ 0.71
Trim47-202ENSMUST00000106441 Rnf103Q9R1W3 683 aa19.5■□□□□ 0.71
Trim47-202ENSMUST00000106441 Gm45194A0A140LJG2 572 aa19.5■□□□□ 0.71
Trim47-202ENSMUST00000106441 Bpifb9bA2AJD1 591 aa19.5■□□□□ 0.71
Trim47-202ENSMUST00000106441 Apba1B2RUJ5 842 aa19.5■□□□□ 0.71
Trim47-202ENSMUST00000106441 Cdk14O35495 469 aa19.5■□□□□ 0.71
Trim47-202ENSMUST00000106441 Hoxc13P50207 328 aa19.5■□□□□ 0.71
Trim47-202ENSMUST00000106441 Ccdc138Q0VF22 680 aa19.5■□□□□ 0.71
Trim47-202ENSMUST00000106441 Erich4Q3UNU4 136 aa19.5■□□□□ 0.71
Trim47-202ENSMUST00000106441 Zfp90Q61967 636 aa19.5■□□□□ 0.71
Trim47-202ENSMUST00000106441 Dlg4Q62108 724 aa19.5■□□□□ 0.71
Trim47-202ENSMUST00000106441 Ppp1r13bQ62415 1087 aa19.5■□□□□ 0.71
Trim47-202ENSMUST00000106441 Bpifb9aQ80XI7 591 aa19.5■□□□□ 0.71
Trim47-202ENSMUST00000106441 Olfml3Q8BK62 406 aa19.5■□□□□ 0.71
Trim47-202ENSMUST00000106441 Rapgef5Q8C0Q9 814 aa19.5■□□□□ 0.71
Trim47-202ENSMUST00000106441 Slc26a6Q8CIW6 758 aa19.5■□□□□ 0.71
Trim47-202ENSMUST00000106441 Gimap4Q99JY3 219 aa19.5■□□□□ 0.71
Trim47-202ENSMUST00000106441 Mipol1Q9D9F8 279 aa19.5■□□□□ 0.71
Trim47-202ENSMUST00000106441 Prl2b1Q9DAZ2 228 aa19.5■□□□□ 0.71
Trim47-202ENSMUST00000106441 Tcirg1Q9JHF5 834 aa19.5■□□□□ 0.71
Trim47-202ENSMUST00000106441 Plod3Q9R0E1 741 aa19.5■□□□□ 0.71
Trim47-202ENSMUST00000106441 Ggps1Q9WTN0 300 aa19.5■□□□□ 0.71
Trim47-202ENSMUST00000106441 Gm28360A0A087WR25 190 aa19.49■□□□□ 0.71
Trim47-202ENSMUST00000106441 Cep85lA0A1W2P884 806 aa19.49■□□□□ 0.71
Trim47-202ENSMUST00000106441 Gpr161B2RPY5 545 aa19.49■□□□□ 0.71
Trim47-202ENSMUST00000106441 Cyth3O08967 399 aa19.49■□□□□ 0.71
Trim47-202ENSMUST00000106441 Atp9aO70228 1047 aa19.49■□□□□ 0.71
Trim47-202ENSMUST00000106441 Stra6O70491 670 aa19.49■□□□□ 0.71
Trim47-202ENSMUST00000106441 Ppp3caP63328 521 aa19.49■□□□□ 0.71
Trim47-202ENSMUST00000106441 Ptprn2P80560 1001 aa19.49■□□□□ 0.71
Trim47-202ENSMUST00000106441 Taok1Q5F2E8 1001 aa19.49■□□□□ 0.71
Trim47-202ENSMUST00000106441 VwdeQ6DFV8 926 aa19.49■□□□□ 0.71
Trim47-202ENSMUST00000106441 Kcnk18Q6VV64 394 aa19.49■□□□□ 0.71
Trim47-202ENSMUST00000106441 Tas2r134Q7TQB0 298 aa19.49■□□□□ 0.71
Trim47-202ENSMUST00000106441 Dhx32Q8BZS9 744 aa19.49■□□□□ 0.71
Trim47-202ENSMUST00000106441 C130026I21RikQ8C898 291 aa19.49■□□□□ 0.71
Trim47-202ENSMUST00000106441 D630039A03RikQ8K0M7 236 aa19.49■□□□□ 0.71
Trim47-202ENSMUST00000106441 Lrrc56Q8K375 552 aa19.49■□□□□ 0.71
Trim47-202ENSMUST00000106441 Med24Q99K74 987 aa19.49■□□□□ 0.71
Trim47-202ENSMUST00000106441 PdiltQ9DAN1 588 aa19.49■□□□□ 0.71
Trim47-202ENSMUST00000106441 PycardQ9EPB4 193 aa19.49■□□□□ 0.71
Trim47-202ENSMUST00000106441 Tbx20Q9ES03 445 aa19.49■□□□□ 0.71
Trim47-202ENSMUST00000106441 Prom1O54990 867 aa19.49■□□□□ 0.71
Trim47-202ENSMUST00000106441 Ces1cP23953 554 aa19.49■□□□□ 0.71
Trim47-202ENSMUST00000106441 Akr1b8P45377 316 aa19.49■□□□□ 0.71
Trim47-202ENSMUST00000106441 Syt2P46097 422 aa19.49■□□□□ 0.71
Trim47-202ENSMUST00000106441 Muc1Q02496 630 aa19.49■□□□□ 0.71
Trim47-202ENSMUST00000106441 Q3UK37 420 aa19.49■□□□□ 0.71
Trim47-202ENSMUST00000106441 C2cd2lQ80X80 706 aa19.49■□□□□ 0.71
Retrieved 100 of 22,080 RNA–protein pairs in 16.7 ms