RNA–Protein interactions for RNA: ENSMUST00000086923.5

Col17a1-202, Transcript of Collagen alpha-1(XVII) chain, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Col17a1, Length 5,477 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1-202ENSMUST00000086923 Cog4Q8R1U1 785 aa17.26■□□□□ 0.35
Col17a1-202ENSMUST00000086923 Pcdhb5Q91XZ5 792 aa17.26■□□□□ 0.35
Col17a1-202ENSMUST00000086923 Ppp1r2Q9DCL8 206 aa17.26■□□□□ 0.35
Col17a1-202ENSMUST00000086923 Unc5cO08747 931 aa17.25■□□□□ 0.35
Col17a1-202ENSMUST00000086923 Ccdc69Q3TCJ8 202 aa17.25■□□□□ 0.35
Col17a1-202ENSMUST00000086923 Arid5aQ3U108 590 aa17.25■□□□□ 0.35
Col17a1-202ENSMUST00000086923 Arhgap25Q8BYW1 648 aa17.25■□□□□ 0.35
Col17a1-202ENSMUST00000086923 Appl2Q8K3G9 662 aa17.25■□□□□ 0.35
Col17a1-202ENSMUST00000086923 InscQ3HNM7 579 aa17.25■□□□□ 0.35
Col17a1-202ENSMUST00000086923 Foxn3Q499D0 457 aa17.25■□□□□ 0.35
Col17a1-202ENSMUST00000086923 Il17raQ60943 864 aa17.25■□□□□ 0.35
Col17a1-202ENSMUST00000086923 Ap1s3Q7TN05 154 aa17.25■□□□□ 0.35
Col17a1-202ENSMUST00000086923 Ubxn10Q8BG34 277 aa17.25■□□□□ 0.35
Col17a1-202ENSMUST00000086923 Pcmtd2Q8BHD8 359 aa17.25■□□□□ 0.35
Col17a1-202ENSMUST00000086923 Vps50Q8CI71 964 aa17.25■□□□□ 0.35
Col17a1-202ENSMUST00000086923 Dnajc7Q9QYI3 494 aa17.25■□□□□ 0.35
Col17a1-202ENSMUST00000086923 Krt83E9Q1Y9 479 aa17.25■□□□□ 0.35
Col17a1-202ENSMUST00000086923 Ifnb1P01575 182 aa17.25■□□□□ 0.35
Col17a1-202ENSMUST00000086923 Gsta3P30115 221 aa17.25■□□□□ 0.35
Col17a1-202ENSMUST00000086923 ClmnQ8C5W0 1052 aa17.25■□□□□ 0.35
Col17a1-202ENSMUST00000086923 Epm2aip1Q8VEH5 606 aa17.25■□□□□ 0.35
Col17a1-202ENSMUST00000086923 Adck1Q9D0L4 525 aa17.25■□□□□ 0.35
Col17a1-202ENSMUST00000086923 Klra10Q9R1G6 266 aa17.25■□□□□ 0.35
Col17a1-202ENSMUST00000086923 Anxa8O35640 327 aa17.25■□□□□ 0.35
Col17a1-202ENSMUST00000086923 Nedd8P29595 81 aa17.25■□□□□ 0.35
Col17a1-202ENSMUST00000086923 Tnni3P48787 211 aa17.25■□□□□ 0.35
Col17a1-202ENSMUST00000086923 Sema3eP70275 775 aa17.25■□□□□ 0.35
Col17a1-202ENSMUST00000086923 Wdr41Q3UDP0 460 aa17.25■□□□□ 0.35
Col17a1-202ENSMUST00000086923 Gtse1Q8R080 741 aa17.25■□□□□ 0.35
Col17a1-202ENSMUST00000086923 Map3k19E9Q3S4 1311 aa17.25■□□□□ 0.35
Col17a1-202ENSMUST00000086923 Tmem109Q3UBX0 243 aa17.24■□□□□ 0.35
Col17a1-202ENSMUST00000086923 Slc9a1Q61165 820 aa17.24■□□□□ 0.35
Col17a1-202ENSMUST00000086923 Dnajc5gQ8C632 165 aa17.24■□□□□ 0.35
Col17a1-202ENSMUST00000086923 Sh3kbp1Q8R550 709 aaKnown RBP17.24■□□□□ 0.35
Col17a1-202ENSMUST00000086923 Prpsap1Q9D0M1 356 aa17.24■□□□□ 0.35
Col17a1-202ENSMUST00000086923 Gpatch1Q9DBM1 930 aa17.24■□□□□ 0.35
Col17a1-202ENSMUST00000086923 Foxp4Q9DBY0 795 aaKnown RBP17.24■□□□□ 0.35
Col17a1-202ENSMUST00000086923 Dnajc10Q9DC23 793 aa17.24■□□□□ 0.35
Col17a1-202ENSMUST00000086923 Krt6bQ9Z331 562 aa17.24■□□□□ 0.35
Col17a1-202ENSMUST00000086923 AceP09470 1312 aa17.24■□□□□ 0.35
Col17a1-202ENSMUST00000086923 Plch2A2AP18 1501 aa17.24■□□□□ 0.35
Col17a1-202ENSMUST00000086923 A530032D15RikE9Q422 215 aa17.24■□□□□ 0.35
Col17a1-202ENSMUST00000086923 Kcna2P63141 499 aa17.24■□□□□ 0.35
Col17a1-202ENSMUST00000086923 ErfP70459 551 aa17.24■□□□□ 0.35
Col17a1-202ENSMUST00000086923 Atp13a5Q3TYU2 1216 aa17.24■□□□□ 0.35
Col17a1-202ENSMUST00000086923 Arhgef16Q3U5C8 713 aa17.24■□□□□ 0.35
Col17a1-202ENSMUST00000086923 Atp11bQ6DFW5 1175 aa17.24■□□□□ 0.35
Col17a1-202ENSMUST00000086923 Tdpoz4Q6YCH2 370 aa17.24■□□□□ 0.35
Col17a1-202ENSMUST00000086923 Teddm1aQ810U2 305 aa17.24■□□□□ 0.35
Col17a1-202ENSMUST00000086923 Gimap5Q8BWF2 308 aa17.24■□□□□ 0.35
Col17a1-202ENSMUST00000086923 St5Q924W7 1134 aa17.24■□□□□ 0.35
Col17a1-202ENSMUST00000086923 Kbtbd2G3X9X1 623 aa17.24■□□□□ 0.35
Col17a1-202ENSMUST00000086923 ChrngP04760 519 aa17.24■□□□□ 0.35
Col17a1-202ENSMUST00000086923 BC051142Q3V0M8 400 aa17.24■□□□□ 0.35
Col17a1-202ENSMUST00000086923 Odr4Q4PJX1 447 aa17.24■□□□□ 0.35
Col17a1-202ENSMUST00000086923 Smarca1Q6PGB8 1046 aa17.24■□□□□ 0.35
Col17a1-202ENSMUST00000086923 Asnsd1Q8BFS9 627 aa17.24■□□□□ 0.35
Col17a1-202ENSMUST00000086923 ThemisQ8BGW0 636 aa17.24■□□□□ 0.35
Col17a1-202ENSMUST00000086923 Crtc3Q91X84 619 aa17.24■□□□□ 0.35
Col17a1-202ENSMUST00000086923 JcadQ5DTX6 1320 aa17.24■□□□□ 0.35
Col17a1-202ENSMUST00000086923 Ifit3bE9PV48 403 aa17.24■□□□□ 0.35
Col17a1-202ENSMUST00000086923 Ptpn20O55082 426 aa17.24■□□□□ 0.35
Col17a1-202ENSMUST00000086923 SarsP26638 512 aaKnown RBP17.24■□□□□ 0.35
Col17a1-202ENSMUST00000086923 Slc1a1P51906 523 aa17.24■□□□□ 0.35
Col17a1-202ENSMUST00000086923 XiapQ60989 496 aa17.24■□□□□ 0.35
Col17a1-202ENSMUST00000086923 Eif2s1Q6ZWX6 315 aaKnown RBP17.24■□□□□ 0.35
Col17a1-202ENSMUST00000086923 Eaf2Q91ZD6 262 aa17.24■□□□□ 0.35
Col17a1-202ENSMUST00000086923 Cyp11b2P15539 500 aa17.24■□□□□ 0.35
Col17a1-202ENSMUST00000086923 PhgdhQ61753 533 aaKnown RBP17.24■□□□□ 0.35
Col17a1-202ENSMUST00000086923 Cyfip1Q7TMB8 1253 aa17.24■□□□□ 0.35
Col17a1-202ENSMUST00000086923 Olfr119Q7TRJ5 321 aa17.24■□□□□ 0.35
Col17a1-202ENSMUST00000086923 GatbQ99JT1 557 aa17.24■□□□□ 0.35
Col17a1-202ENSMUST00000086923 Pdxdc1Q99K01 787 aaKnown RBP17.24■□□□□ 0.35
Col17a1-202ENSMUST00000086923 Ttc14Q9CSP9 761 aa17.24■□□□□ 0.35
Col17a1-202ENSMUST00000086923 Fam84aQ9D650 292 aa17.24■□□□□ 0.35
Col17a1-202ENSMUST00000086923 Gipc2Q9Z2H7 314 aa17.24■□□□□ 0.35
Col17a1-202ENSMUST00000086923 Stam2O88811 523 aa17.23■□□□□ 0.35
Col17a1-202ENSMUST00000086923 Lztr1Q9CQ33 837 aa17.23■□□□□ 0.35
Col17a1-202ENSMUST00000086923 Rnf6Q9DBU5 667 aa17.23■□□□□ 0.35
Col17a1-202ENSMUST00000086923 Tsga8Q9JJL0 238 aa17.23■□□□□ 0.35
Col17a1-202ENSMUST00000086923 Lrfn1Q2WF71 766 aa17.23■□□□□ 0.35
Col17a1-202ENSMUST00000086923 Fbxo9Q8BK06 437 aa17.23■□□□□ 0.35
Col17a1-202ENSMUST00000086923 Zhx2Q8C0C0 836 aaKnown RBP17.23■□□□□ 0.35
Col17a1-202ENSMUST00000086923 ClyblQ8R4N0 338 aa17.23■□□□□ 0.35
Col17a1-202ENSMUST00000086923 Sntg2Q925E0 539 aa17.23■□□□□ 0.35
Col17a1-202ENSMUST00000086923 RtcbQ99LF4 505 aaKnown RBP17.23■□□□□ 0.35
Col17a1-202ENSMUST00000086923 Habp4Q9JKS5 411 aaKnown RBP17.23■□□□□ 0.35
Col17a1-202ENSMUST00000086923 Phf11A6H5X4 337 aa17.23■□□□□ 0.35
Col17a1-202ENSMUST00000086923 Osbpl8B9EJ86 889 aa17.23■□□□□ 0.35
Col17a1-202ENSMUST00000086923 Atf5O70191 283 aa17.23■□□□□ 0.35
Col17a1-202ENSMUST00000086923 Tbc1d10aP58802 500 aa17.23■□□□□ 0.35
Col17a1-202ENSMUST00000086923 Ifi47Q61635 420 aa17.23■□□□□ 0.35
Col17a1-202ENSMUST00000086923 Usp20Q8C6M1 916 aa17.23■□□□□ 0.35
Col17a1-202ENSMUST00000086923 Tceal3Q8R0A5 200 aa17.23■□□□□ 0.35
Col17a1-202ENSMUST00000086923 NclnQ8VCM8 563 aaKnown RBP17.23■□□□□ 0.35
Col17a1-202ENSMUST00000086923 Tjp2Q9Z0U1 1167 aaKnown RBP17.23■□□□□ 0.35
Col17a1-202ENSMUST00000086923 Cyp11b1Q3TG86 501 aa17.23■□□□□ 0.35
Col17a1-202ENSMUST00000086923 Rapgefl1Q68EF8 662 aa17.23■□□□□ 0.35
Col17a1-202ENSMUST00000086923 Q8BGD0 127 aa17.23■□□□□ 0.35
Col17a1-202ENSMUST00000086923 Slc25a24Q8BMD8 475 aa17.23■□□□□ 0.35
Retrieved 100 of 22,080 RNA–protein pairs in 47.9 ms