RNA–Protein interactions for RNA: ENSMUST00000085546.12

Hmgb1-201, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 2,838 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-201ENSMUST00000085546 Ska1Q9CPV1 254 aa10.3□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Dppa5aQ9CQS7 118 aa10.3□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Alpk1Q9CXB8 1231 aa10.3□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 March8Q9DBD2 286 aa10.3□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Nupr1Q9WTK0 80 aa10.3□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Olfr671A0A1B0GSN5 317 aa10.3□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Arhgef37A1IGU4 676 aa10.3□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Fyb2A2A995 729 aa10.3□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Magea10A2AMW4 325 aa10.3□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Glt1d1A4FUP9 346 aa10.3□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Gm4847G3X946 537 aa10.3□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Aff1O88573 1216 aa10.3□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Pabpc1P29341 636 aaKnown RBP10.3□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Cdk16Q04735 496 aa10.3□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Nsrp1Q5NCR9 542 aa10.3□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Tmem266Q8BZB3 538 aa10.3□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 C130026I21RikQ8C898 291 aa10.3□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Gpc3Q8CFZ4 579 aa10.3□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Creb5Q8K1L0 357 aa10.3□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Slc18a1Q8R090 521 aa10.3□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 SfpqQ8VIJ6 699 aaKnown RBP10.3□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Tor1aip1Q921T2 595 aaKnown RBP10.3□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Rsl24d1Q99L28 163 aa10.3□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Rin2Q9D684 903 aa10.3□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Frmpd4A2AFR3 1320 aa10.3□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Crabp2P22935 138 aa10.29□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Gna15P30678 374 aa10.29□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 GssP51855 474 aa10.29□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Cyth2P63034 400 aaKnown RBP10.29□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Sec31bQ3TZ89 1158 aa10.29□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Grm6Q5NCH9 871 aa10.29□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Birc2Q62210 612 aa10.29□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Ugt1a1Q63886 535 aa10.29□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 PhkbQ7TSH2 1085 aa10.29□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 AdalQ80SY6 360 aa10.29□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Plekhn1Q8C886 359 aa10.29□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Plekha4Q8VC98 588 aa10.29□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 TraipQ8VIG6 470 aa10.29□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Pdk3Q922H2 415 aaKnown RBP10.29□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Ccdc124Q9D8X2 217 aaKnown RBP10.29□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Cnpy3Q9DAU1 276 aa10.29□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Tjap1Q9DCD5 539 aa10.29□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Asb4Q9WV71 426 aa10.29□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Gm5862K7N5V5 267 aa10.29□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Guca2bO09051 106 aa10.29□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Men1O88559 611 aaKnown RBP10.29□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Prl2c2P04095 224 aa10.29□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Atp6v0a2P15920 856 aa10.29□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 PahP16331 453 aa10.29□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Epha3P29319 983 aa10.29□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Ripk2P58801 539 aa10.29□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Igsf9Q05BQ1 1179 aa10.29□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 SpoplQ2M2N2 392 aa10.29□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Nr1h2Q60644 446 aa10.29□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Ccp110Q7TSH4 1004 aa10.29□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 9230110C19RikQ8CC70 267 aa10.29□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Myl6bQ8CI43 207 aa10.29□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 TbccQ8VCN9 341 aa10.29□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Gid8Q9D7M1 228 aa10.29□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Adam22Q9R1V6 904 aa10.29□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 FocadA2AKG8 1798 aa10.29□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Lonrf1D3YY23 762 aa10.29□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Gm2030D3Z7C4 212 aa10.29□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Tuba1bP05213 451 aa10.29□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Gria2P23819 883 aa10.29□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Stt3aP46978 705 aa10.29□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Tuba1aP68369 451 aa10.29□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 E330034G19RikQ3UWX6 351 aa10.29□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Mcm7Q61881 719 aaKnown RBP10.29□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Myl10Q62082 202 aa10.29□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Fkbp3Q62446 224 aaKnown RBP10.29□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Slc44a1Q6X893 653 aa10.29□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Crybg3Q80W49 1005 aa10.29□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Q8BGC1 442 aa10.29□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Frmd4aQ8BIE6 1020 aa10.29□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Sun2Q8BJS4 731 aa10.29□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Zfp263Q8CF60 680 aa10.29□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Bag5Q8CI32 447 aa10.29□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Trib2Q8K4K3 343 aa10.29□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 HyiQ8R1F5 277 aa10.29□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Slc26a7Q8R2Z3 656 aa10.29□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Chn1Q91V57 459 aa10.29□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Creb3l3Q91XE9 479 aa10.29□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Asic2Q925H0 512 aa10.29□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 DenrQ9CQJ6 198 aaKnown RBP10.29□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 9030624G23RikQ9D308 155 aa10.29□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Mzb1Q9D8I1 188 aa10.29□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Sertad2Q9JJG5 309 aa10.29□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Actl7bQ9QY83 418 aa10.29□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 EmcnQ9R0H2 261 aa10.29□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 CN725425A0A087WRU1 652 aa10.28□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Gpr161B2RPY5 545 aa10.28□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Klhl3E0CZ16 587 aa10.28□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Gimap9G3X987 291 aa10.28□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Mknk1O08605 427 aa10.28□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Api5O35841 504 aaKnown RBP10.28□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Tom1O88746 492 aa10.28□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 BdnfP21237 249 aa10.28□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Rasgrf1P27671 1262 aa10.28□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 NapbP28663 298 aa10.28□□□□□ -0.76
Retrieved 100 of 22,080 RNA–protein pairs in 16.7 ms