RNA–Protein interactions for RNA: ENSMUST00000068411.4

Ccdc88c-201, Transcript of Protein Daple, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc88c, Length 7,542 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88c-201ENSMUST00000068411 Q9D1F3 157 aa13.24□□□□□ -0.29
Ccdc88c-201ENSMUST00000068411 Cse1lQ9ERK4 971 aaKnown RBP13.24□□□□□ -0.29
Ccdc88c-201ENSMUST00000068411 Gm3755K7N743 167 aa13.24□□□□□ -0.29
Ccdc88c-201ENSMUST00000068411 Rbp3P49194 1234 aa13.24□□□□□ -0.29
Ccdc88c-201ENSMUST00000068411 Ptrh1Q8BW00 204 aa13.24□□□□□ -0.29
Ccdc88c-201ENSMUST00000068411 Taf11Q99JX1 211 aa13.24□□□□□ -0.29
Ccdc88c-201ENSMUST00000068411 Pcna-ps2A0A140T8V5 261 aa13.24□□□□□ -0.29
Ccdc88c-201ENSMUST00000068411 Speer4eK7N6S8 255 aa13.24□□□□□ -0.29
Ccdc88c-201ENSMUST00000068411 Vmn2r71L7N2D8 855 aa13.24□□□□□ -0.29
Ccdc88c-201ENSMUST00000068411 Ppef2O35385 757 aa13.24□□□□□ -0.29
Ccdc88c-201ENSMUST00000068411 Olfm4Q3UZZ4 505 aa13.24□□□□□ -0.29
Ccdc88c-201ENSMUST00000068411 Slc13a5Q67BT3 572 aa13.24□□□□□ -0.29
Ccdc88c-201ENSMUST00000068411 AbraQ8BUZ1 375 aa13.24□□□□□ -0.29
Ccdc88c-201ENSMUST00000068411 Ddah1Q9CWS0 285 aa13.24□□□□□ -0.29
Ccdc88c-201ENSMUST00000068411 Trappc3O55013 180 aa13.24□□□□□ -0.29
Ccdc88c-201ENSMUST00000068411 Pms2P54279 859 aa13.24□□□□□ -0.29
Ccdc88c-201ENSMUST00000068411 Trpc1Q61056 793 aa13.24□□□□□ -0.29
Ccdc88c-201ENSMUST00000068411 Tti1Q91V83 1085 aa13.24□□□□□ -0.29
Ccdc88c-201ENSMUST00000068411 Fam49bQ921M7 324 aa13.24□□□□□ -0.29
Ccdc88c-201ENSMUST00000068411 D1Pas1P16381 660 aa13.24□□□□□ -0.29
Ccdc88c-201ENSMUST00000068411 Uchl4P58321 233 aa13.24□□□□□ -0.29
Ccdc88c-201ENSMUST00000068411 PrkcbP68404 671 aa13.24□□□□□ -0.29
Ccdc88c-201ENSMUST00000068411 Bcap29Q61334 240 aa13.24□□□□□ -0.29
Ccdc88c-201ENSMUST00000068411 Nudt16Q6P3D0 195 aa13.24□□□□□ -0.29
Ccdc88c-201ENSMUST00000068411 Atl2Q6PA06 583 aa13.24□□□□□ -0.29
Ccdc88c-201ENSMUST00000068411 CntrobQ8CB62 887 aa13.24□□□□□ -0.29
Ccdc88c-201ENSMUST00000068411 1700129C05RikQ9CQ77 218 aa13.24□□□□□ -0.29
Ccdc88c-201ENSMUST00000068411 CenpsQ9D084 142 aa13.24□□□□□ -0.29
Ccdc88c-201ENSMUST00000068411 Smyd5Q3TYX3 416 aa13.23□□□□□ -0.29
Ccdc88c-201ENSMUST00000068411 Znf280dQ68FE8 974 aa13.23□□□□□ -0.29
Ccdc88c-201ENSMUST00000068411 Uba3Q8C878 462 aa13.23□□□□□ -0.29
Ccdc88c-201ENSMUST00000068411 Pop1Q8K205 1045 aa13.23□□□□□ -0.29
Ccdc88c-201ENSMUST00000068411 Btbd6Q8K2J9 488 aa13.23□□□□□ -0.29
Ccdc88c-201ENSMUST00000068411 Cyp4f14Q9EP75 524 aa13.23□□□□□ -0.29
Ccdc88c-201ENSMUST00000068411 AlkP97793 1621 aa13.23□□□□□ -0.29
Ccdc88c-201ENSMUST00000068411 HnrnprQ8VHM5 632 aaKnown RBP13.23□□□□□ -0.29
Ccdc88c-201ENSMUST00000068411 Snx10Q9CWT3 201 aa13.23□□□□□ -0.29
Ccdc88c-201ENSMUST00000068411 Lmtk2Q3TYD6 1471 aa13.23□□□□□ -0.29
Ccdc88c-201ENSMUST00000068411 Adcy1O88444 1118 aa13.23□□□□□ -0.29
Ccdc88c-201ENSMUST00000068411 Krt86P97861 486 aa13.23□□□□□ -0.29
Ccdc88c-201ENSMUST00000068411 Casc4Q6P2L7 435 aa13.23□□□□□ -0.29
Ccdc88c-201ENSMUST00000068411 Fam120bQ6RI63 786 aa13.23□□□□□ -0.29
Ccdc88c-201ENSMUST00000068411 CenpuQ8C4M7 410 aa13.23□□□□□ -0.29
Ccdc88c-201ENSMUST00000068411 Rev1Q920Q2 1249 aa13.23□□□□□ -0.29
Ccdc88c-201ENSMUST00000068411 S100pbpQ9D5K4 396 aa13.23□□□□□ -0.29
Ccdc88c-201ENSMUST00000068411 CtsfQ9R013 462 aa13.23□□□□□ -0.29
Ccdc88c-201ENSMUST00000068411 Gm8298J3QPI0 401 aa13.23□□□□□ -0.29
Ccdc88c-201ENSMUST00000068411 Q8BGN9 141 aa13.23□□□□□ -0.29
Ccdc88c-201ENSMUST00000068411 Psmd5Q8BJY1 504 aa13.23□□□□□ -0.29
Ccdc88c-201ENSMUST00000068411 HibchQ8QZS1 385 aa13.23□□□□□ -0.29
Ccdc88c-201ENSMUST00000068411 Ccdc137Q8R0K4 290 aaKnown RBP13.23□□□□□ -0.29
Ccdc88c-201ENSMUST00000068411 PccaQ91ZA3 724 aa13.23□□□□□ -0.29
Ccdc88c-201ENSMUST00000068411 Atp5oQ9DB20 213 aaKnown RBP13.23□□□□□ -0.29
Ccdc88c-201ENSMUST00000068411 Krt16Q9Z2K1 469 aa13.23□□□□□ -0.29
Ccdc88c-201ENSMUST00000068411 Atp13a5Q3TYU2 1216 aa13.23□□□□□ -0.29
Ccdc88c-201ENSMUST00000068411 Serpinb6dQ3UWK8 375 aa13.23□□□□□ -0.29
Ccdc88c-201ENSMUST00000068411 PreplQ8C167 725 aa13.23□□□□□ -0.29
Ccdc88c-201ENSMUST00000068411 Sun1Q9D666 913 aaKnown RBP13.23□□□□□ -0.29
Ccdc88c-201ENSMUST00000068411 Usp49Q6P9L4 685 aa13.23□□□□□ -0.29
Ccdc88c-201ENSMUST00000068411 Ints2Q80UK8 1198 aa13.23□□□□□ -0.29
Ccdc88c-201ENSMUST00000068411 Tgif2lx2Q8K5B9 231 aa13.23□□□□□ -0.29
Ccdc88c-201ENSMUST00000068411 Rbmx2Q8R0F5 326 aaKnown RBP13.23□□□□□ -0.29
Ccdc88c-201ENSMUST00000068411 Dpp3Q99KK7 738 aa13.23□□□□□ -0.29
Ccdc88c-201ENSMUST00000068411 Extl3Q9WVL6 918 aa13.23□□□□□ -0.29
Ccdc88c-201ENSMUST00000068411 M1apQ9Z0E1 529 aa13.23□□□□□ -0.29
Ccdc88c-201ENSMUST00000068411 Stx3Q64704 289 aa13.22□□□□□ -0.29
Ccdc88c-201ENSMUST00000068411 Znf618Q80YY7 953 aaKnown RBP13.22□□□□□ -0.29
Ccdc88c-201ENSMUST00000068411 Trpa1Q8BLA8 1125 aa13.22□□□□□ -0.29
Ccdc88c-201ENSMUST00000068411 Apol9bQ8C7I4 310 aa13.22□□□□□ -0.29
Ccdc88c-201ENSMUST00000068411 Apol9aQ8VDU3 310 aa13.22□□□□□ -0.29
Ccdc88c-201ENSMUST00000068411 A0A1Y7VP24 259 aa13.22□□□□□ -0.29
Ccdc88c-201ENSMUST00000068411 Zfp839E9PUU5 921 aa13.22□□□□□ -0.29
Ccdc88c-201ENSMUST00000068411 Gm10354K7N6A0 256 aa13.22□□□□□ -0.29
Ccdc88c-201ENSMUST00000068411 Psmb9P28076 219 aa13.22□□□□□ -0.29
Ccdc88c-201ENSMUST00000068411 Fbxo39Q5NBU5 443 aa13.22□□□□□ -0.29
Ccdc88c-201ENSMUST00000068411 Tdrd5Q5VCS6 1040 aa13.22□□□□□ -0.29
Ccdc88c-201ENSMUST00000068411 Lrrc8dQ8BGR2 859 aa13.22□□□□□ -0.29
Ccdc88c-201ENSMUST00000068411 Trim9Q8C7M3 817 aa13.22□□□□□ -0.29
Ccdc88c-201ENSMUST00000068411 2310003L06RikQ9CV82 495 aa13.22□□□□□ -0.29
Ccdc88c-201ENSMUST00000068411 Fip1l1Q9D824 581 aaKnown RBP13.22□□□□□ -0.29
Ccdc88c-201ENSMUST00000068411 CrotQ9DC50 612 aa13.22□□□□□ -0.29
Ccdc88c-201ENSMUST00000068411 Trip4Q9QXN3 581 aa13.22□□□□□ -0.29
Ccdc88c-201ENSMUST00000068411 Dcun1d1Q9QZ73 259 aa13.22□□□□□ -0.29
Ccdc88c-201ENSMUST00000068411 CenpaO35216 134 aa13.22□□□□□ -0.29
Ccdc88c-201ENSMUST00000068411 Rcn1Q05186 325 aa13.22□□□□□ -0.29
Ccdc88c-201ENSMUST00000068411 Kiaa1551Q5DTW7 1521 aa13.22□□□□□ -0.29
Ccdc88c-201ENSMUST00000068411 Peg10Q7TN75 958 aaKnown RBP13.22□□□□□ -0.29
Ccdc88c-201ENSMUST00000068411 Fbxl21Q8BFZ4 434 aa13.22□□□□□ -0.29
Ccdc88c-201ENSMUST00000068411 Nim1kQ8BHI9 436 aa13.22□□□□□ -0.29
Ccdc88c-201ENSMUST00000068411 CbsQ91WT9 561 aa13.22□□□□□ -0.29
Ccdc88c-201ENSMUST00000068411 Josd2Q9CR30 188 aa13.22□□□□□ -0.29
Ccdc88c-201ENSMUST00000068411 RnmtQ9D0L8 465 aaKnown RBP13.22□□□□□ -0.29
Ccdc88c-201ENSMUST00000068411 Kank3Q9Z1P7 791 aa13.22□□□□□ -0.29
Ccdc88c-201ENSMUST00000068411 Usp54Q8BL06 1588 aaKnown RBP13.22□□□□□ -0.29
Ccdc88c-201ENSMUST00000068411 Gbp4A4UUI3 631 aa13.22□□□□□ -0.29
Ccdc88c-201ENSMUST00000068411 TriqkB2B9E1 86 aa13.22□□□□□ -0.29
Ccdc88c-201ENSMUST00000068411 Zfp266E9Q2S7 604 aa13.22□□□□□ -0.29
Ccdc88c-201ENSMUST00000068411 Casp4P70343 373 aa13.22□□□□□ -0.29
Ccdc88c-201ENSMUST00000068411 Chi3l1Q61362 389 aa13.22□□□□□ -0.29
Ccdc88c-201ENSMUST00000068411 Fhod1Q6P9Q4 1197 aa13.22□□□□□ -0.29
Retrieved 100 of 22,080 RNA–protein pairs in 19 ms