RNA–Protein interactions for RNA: ENSMUST00000057438.6

Vcpip1-201, Transcript of Deubiquitinating protein VCIP135, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vcpip1, Length 9,749 nt, Biotype protein coding, Subcellular localisation Nucleus, Pseudopodium .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1-201ENSMUST00000057438 Ccndbp1Q3TVC7 356 aa13.02□□□□□ -0.32
Vcpip1-201ENSMUST00000057438 Hoxa13Q62424 386 aa13.02□□□□□ -0.32
Vcpip1-201ENSMUST00000057438 Defb15Q8R2I5 79 aa13.02□□□□□ -0.32
Vcpip1-201ENSMUST00000057438 Lrrc14Q8VC16 493 aa13.02□□□□□ -0.32
Vcpip1-201ENSMUST00000057438 Pcdhb21Q91V48 774 aa13.02□□□□□ -0.32
Vcpip1-201ENSMUST00000057438 NfkbizQ9EST8 728 aa13.02□□□□□ -0.32
Vcpip1-201ENSMUST00000057438 PygmQ9WUB3 842 aaKnown RBP13.02□□□□□ -0.32
Vcpip1-201ENSMUST00000057438 Extl3Q9WVL6 918 aa13.02□□□□□ -0.32
Vcpip1-201ENSMUST00000057438 Gm21149A0A0G2JFY7 255 aa13.02□□□□□ -0.32
Vcpip1-201ENSMUST00000057438 Eepd1Q3TGW2 569 aa13.02□□□□□ -0.32
Vcpip1-201ENSMUST00000057438 Ccna1Q61456 421 aa13.02□□□□□ -0.32
Vcpip1-201ENSMUST00000057438 Gm9758Q80ZT2 255 aa13.02□□□□□ -0.32
Vcpip1-201ENSMUST00000057438 Chmp2bQ8BJF9 213 aa13.02□□□□□ -0.32
Vcpip1-201ENSMUST00000057438 Thg1lQ9CY52 298 aa13.02□□□□□ -0.32
Vcpip1-201ENSMUST00000057438 Mrpl4Q9DCU6 294 aaKnown RBP13.02□□□□□ -0.32
Vcpip1-201ENSMUST00000057438 A0A1Y7VP24 259 aa13.02□□□□□ -0.32
Vcpip1-201ENSMUST00000057438 Cyp3a59D3Z2W7 503 aa13.02□□□□□ -0.32
Vcpip1-201ENSMUST00000057438 Ttc39dQ0VF76 604 aa13.02□□□□□ -0.32
Vcpip1-201ENSMUST00000057438 Armcx5Q3UZB0 606 aa13.02□□□□□ -0.32
Vcpip1-201ENSMUST00000057438 CybbQ61093 570 aa13.02□□□□□ -0.32
Vcpip1-201ENSMUST00000057438 Sptlc3Q8BG54 563 aa13.02□□□□□ -0.32
Vcpip1-201ENSMUST00000057438 Epc1Q8C9X6 813 aa13.02□□□□□ -0.32
Vcpip1-201ENSMUST00000057438 Cog3Q8CI04 820 aa13.02□□□□□ -0.32
Vcpip1-201ENSMUST00000057438 OafQ8QZR4 282 aa13.02□□□□□ -0.32
Vcpip1-201ENSMUST00000057438 TcimQ9D915 106 aa13.02□□□□□ -0.32
Vcpip1-201ENSMUST00000057438 Abcg8Q9DBM0 673 aa13.02□□□□□ -0.32
Vcpip1-201ENSMUST00000057438 Xpo7Q9EPK7 1087 aa13.02□□□□□ -0.32
Vcpip1-201ENSMUST00000057438 Dcun1d1Q9QZ73 259 aa13.02□□□□□ -0.32
Vcpip1-201ENSMUST00000057438 Scnn1aQ61180 699 aa13.02□□□□□ -0.33
Vcpip1-201ENSMUST00000057438 Coro7Q9D2V7 922 aa13.02□□□□□ -0.33
Vcpip1-201ENSMUST00000057438 Slc5a4aQ9ET37 656 aa13.02□□□□□ -0.33
Vcpip1-201ENSMUST00000057438 1700024B05RikE9Q6D7 167 aa13.02□□□□□ -0.33
Vcpip1-201ENSMUST00000057438 Arid5bQ8BM75 1188 aaKnown RBP13.02□□□□□ -0.33
Vcpip1-201ENSMUST00000057438 Mad2l2Q9D752 211 aa13.02□□□□□ -0.33
Vcpip1-201ENSMUST00000057438 Fam47eD3YWC7 402 aa13.02□□□□□ -0.33
Vcpip1-201ENSMUST00000057438 Aff1O88573 1216 aa13.02□□□□□ -0.33
Vcpip1-201ENSMUST00000057438 Scg3P47867 471 aa13.02□□□□□ -0.33
Vcpip1-201ENSMUST00000057438 Setd4P58467 439 aa13.02□□□□□ -0.33
Vcpip1-201ENSMUST00000057438 Trim43cP86449 446 aa13.02□□□□□ -0.33
Vcpip1-201ENSMUST00000057438 Gga3Q8BMI3 718 aa13.02□□□□□ -0.33
Vcpip1-201ENSMUST00000057438 Morc2bQ8C5W4 1022 aa13.02□□□□□ -0.33
Vcpip1-201ENSMUST00000057438 Ccdc130Q9D516 385 aa13.02□□□□□ -0.33
Vcpip1-201ENSMUST00000057438 Erap1Q9EQH2 930 aa13.02□□□□□ -0.33
Vcpip1-201ENSMUST00000057438 Dgcr8Q9EQM6 773 aa13.02□□□□□ -0.33
Vcpip1-201ENSMUST00000057438 Gm3173A6NAS3 172 aa13.02□□□□□ -0.33
Vcpip1-201ENSMUST00000057438 Gm3020E9Q3J7 150 aa13.02□□□□□ -0.33
Vcpip1-201ENSMUST00000057438 Gm2897K7N6T7 172 aa13.02□□□□□ -0.33
Vcpip1-201ENSMUST00000057438 PdgfraP26618 1089 aa13.02□□□□□ -0.33
Vcpip1-201ENSMUST00000057438 Nol4P60954 483 aa13.02□□□□□ -0.33
Vcpip1-201ENSMUST00000057438 Gm3411Q8C7R2 150 aa13.02□□□□□ -0.33
Vcpip1-201ENSMUST00000057438 Atp6v1b1Q91YH6 513 aa13.02□□□□□ -0.33
Vcpip1-201ENSMUST00000057438 Efna5O08543 228 aa13.01□□□□□ -0.33
Vcpip1-201ENSMUST00000057438 Alppl2P24823 529 aa13.01□□□□□ -0.33
Vcpip1-201ENSMUST00000057438 NfibP97863 570 aaKnown RBP13.01□□□□□ -0.33
Vcpip1-201ENSMUST00000057438 NpeppsQ11011 920 aa13.01□□□□□ -0.33
Vcpip1-201ENSMUST00000057438 Fam107aQ78TU8 144 aa13.01□□□□□ -0.33
Vcpip1-201ENSMUST00000057438 Nup93Q8BJ71 819 aaKnown RBP13.01□□□□□ -0.33
Vcpip1-201ENSMUST00000057438 Pabpc6Q9D4E6 643 aaKnown RBP13.01□□□□□ -0.33
Vcpip1-201ENSMUST00000057438 Sapcd2Q9D818 391 aa13.01□□□□□ -0.33
Vcpip1-201ENSMUST00000057438 HaspinQ9Z0R0 754 aa13.01□□□□□ -0.33
Vcpip1-201ENSMUST00000057438 Myo3aQ8K3H5 1613 aa13.01□□□□□ -0.33
Vcpip1-201ENSMUST00000057438 Srp72F8VQC1 671 aa13.01□□□□□ -0.33
Vcpip1-201ENSMUST00000057438 SftpdP50404 374 aa13.01□□□□□ -0.33
Vcpip1-201ENSMUST00000057438 Gpc3Q8CFZ4 579 aa13.01□□□□□ -0.33
Vcpip1-201ENSMUST00000057438 Gm3424L7N298 263 aa13.01□□□□□ -0.33
Vcpip1-201ENSMUST00000057438 Gm8246M0QWX9 263 aa13.01□□□□□ -0.33
Vcpip1-201ENSMUST00000057438 SnrpfP62307 86 aaKnown RBP13.01□□□□□ -0.33
Vcpip1-201ENSMUST00000057438 Pcdha11Q91Y19 950 aa13.01□□□□□ -0.33
Vcpip1-201ENSMUST00000057438 Ifi206G3UZV2 921 aa13.01□□□□□ -0.33
Vcpip1-201ENSMUST00000057438 Cdh15P33146 784 aa13.01□□□□□ -0.33
Vcpip1-201ENSMUST00000057438 Supt20hQ7TT00 530 aaKnown RBP13.01□□□□□ -0.33
Vcpip1-201ENSMUST00000057438 Vmn1r213Q8R278 384 aa13.01□□□□□ -0.33
Vcpip1-201ENSMUST00000057438 Lrrc59Q922Q8 307 aaKnown RBP13.01□□□□□ -0.33
Vcpip1-201ENSMUST00000057438 E230025N22RikG5E8S3 482 aa13.01□□□□□ -0.33
Vcpip1-201ENSMUST00000057438 Dnajb6O54946 365 aa13.01□□□□□ -0.33
Vcpip1-201ENSMUST00000057438 Krt2Q3TTY5 707 aa13.01□□□□□ -0.33
Vcpip1-201ENSMUST00000057438 Vwa3aQ3UVV9 1148 aa13.01□□□□□ -0.33
Vcpip1-201ENSMUST00000057438 Tbc1d12Q6A039 696 aa13.01□□□□□ -0.33
Vcpip1-201ENSMUST00000057438 Myh13B1AR69 1938 aa13.01□□□□□ -0.33
Vcpip1-201ENSMUST00000057438 Tfe3Q64092 572 aaKnown RBP13.01□□□□□ -0.33
Vcpip1-201ENSMUST00000057438 Stard7Q8R1R3 373 aa13.01□□□□□ -0.33
Vcpip1-201ENSMUST00000057438 Ccdc81Q9D5W4 654 aa13.01□□□□□ -0.33
Vcpip1-201ENSMUST00000057438 Serpinb9bQ9DAV6 377 aa13.01□□□□□ -0.33
Vcpip1-201ENSMUST00000057438 Rpn2Q9DBG6 631 aaKnown RBP13.01□□□□□ -0.33
Vcpip1-201ENSMUST00000057438 1700016G14RikA0A286YCZ6 238 aa13.01□□□□□ -0.33
Vcpip1-201ENSMUST00000057438 Pou6f1Q07916 301 aa13.01□□□□□ -0.33
Vcpip1-201ENSMUST00000057438 Q6GQU0 248 aa13.01□□□□□ -0.33
Vcpip1-201ENSMUST00000057438 PygbQ8CI94 843 aaKnown RBP13.01□□□□□ -0.33
Vcpip1-201ENSMUST00000057438 Chn1Q91V57 459 aa13.01□□□□□ -0.33
Vcpip1-201ENSMUST00000057438 Cd248Q91V98 765 aa13.01□□□□□ -0.33
Vcpip1-201ENSMUST00000057438 Kank3Q9Z1P7 791 aa13.01□□□□□ -0.33
Vcpip1-201ENSMUST00000057438 Ap2a2P17427 938 aaKnown RBP13.01□□□□□ -0.33
Vcpip1-201ENSMUST00000057438 Vsnl1P62761 191 aa13.01□□□□□ -0.33
Vcpip1-201ENSMUST00000057438 Q14AM7 275 aa13.01□□□□□ -0.33
Vcpip1-201ENSMUST00000057438 Pitpnm3Q3UHE1 974 aa13.01□□□□□ -0.33
Vcpip1-201ENSMUST00000057438 Zfp341Q6PGC9 846 aa13.01□□□□□ -0.33
Vcpip1-201ENSMUST00000057438 Ankrd13aQ80UP5 588 aa13.01□□□□□ -0.33
Vcpip1-201ENSMUST00000057438 TdrkhQ80VL1 560 aa13.01□□□□□ -0.33
Vcpip1-201ENSMUST00000057438 Proser2Q8C5R2 471 aa13.01□□□□□ -0.33
Vcpip1-201ENSMUST00000057438 Agr3Q8R3W7 165 aa13.01□□□□□ -0.33
Retrieved 100 of 22,080 RNA–protein pairs in 23.1 ms