RNA–Protein interactions for RNA: ENSMUST00000052965.6

Nipbl-201, Transcript of Nipped-B-like protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nipbl, Length 8,815 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nipbl-201ENSMUST00000052965 Lrrc8eQ66JT1 795 aa11.25□□□□□ -0.61
Nipbl-201ENSMUST00000052965 Tmem179Q8BHH9 233 aa11.25□□□□□ -0.61
Nipbl-201ENSMUST00000052965 GsdmcQ99NB5 468 aa11.25□□□□□ -0.61
Nipbl-201ENSMUST00000052965 Ddah1Q9CWS0 285 aa11.25□□□□□ -0.61
Nipbl-201ENSMUST00000052965 Gadd45gQ9Z111 159 aa11.25□□□□□ -0.61
Nipbl-201ENSMUST00000052965 Slfn8B1ARD8 910 aa11.25□□□□□ -0.61
Nipbl-201ENSMUST00000052965 Gtpbp6Q3U6U5 514 aa11.25□□□□□ -0.61
Nipbl-201ENSMUST00000052965 Prkaa1Q5EG47 559 aa11.25□□□□□ -0.61
Nipbl-201ENSMUST00000052965 Olfr119Q7TRJ5 321 aa11.25□□□□□ -0.61
Nipbl-201ENSMUST00000052965 Sfr1Q8BP27 319 aa11.25□□□□□ -0.61
Nipbl-201ENSMUST00000052965 Pus7lQ8CE46 702 aa11.25□□□□□ -0.61
Nipbl-201ENSMUST00000052965 Actl9Q8CG27 415 aa11.25□□□□□ -0.61
Nipbl-201ENSMUST00000052965 Tmem206Q9D771 350 aa11.25□□□□□ -0.61
Nipbl-201ENSMUST00000052965 Rmdn1Q9DCV4 305 aa11.25□□□□□ -0.61
Nipbl-201ENSMUST00000052965 Akap17bA2A3V1 959 aa11.24□□□□□ -0.61
Nipbl-201ENSMUST00000052965 Apol11bE9PUZ0 337 aa11.24□□□□□ -0.61
Nipbl-201ENSMUST00000052965 Foxm1O08696 760 aa11.24□□□□□ -0.61
Nipbl-201ENSMUST00000052965 Nr5a1P33242 462 aa11.24□□□□□ -0.61
Nipbl-201ENSMUST00000052965 Adad1Q5SUE7 619 aa11.24□□□□□ -0.61
Nipbl-201ENSMUST00000052965 Klhl23Q6GQU2 558 aa11.24□□□□□ -0.61
Nipbl-201ENSMUST00000052965 Arhgap25Q8BYW1 648 aa11.24□□□□□ -0.61
Nipbl-201ENSMUST00000052965 Shcbp1lQ3TTP0 639 aa11.24□□□□□ -0.61
Nipbl-201ENSMUST00000052965 CcnyQ8BGU5 341 aa11.24□□□□□ -0.61
Nipbl-201ENSMUST00000052965 Sap130Q8BIH0 1057 aa11.24□□□□□ -0.61
Nipbl-201ENSMUST00000052965 Adi1Q99JT9 179 aa11.24□□□□□ -0.61
Nipbl-201ENSMUST00000052965 TcimQ9D915 106 aa11.24□□□□□ -0.61
Nipbl-201ENSMUST00000052965 Il2P04351 169 aa11.24□□□□□ -0.61
Nipbl-201ENSMUST00000052965 Arhgef16Q3U5C8 713 aa11.24□□□□□ -0.61
Nipbl-201ENSMUST00000052965 Wbp4Q61048 376 aa11.24□□□□□ -0.61
Nipbl-201ENSMUST00000052965 Pdk3Q922H2 415 aaKnown RBP11.24□□□□□ -0.61
Nipbl-201ENSMUST00000052965 Flt4P35917 1363 aa11.24□□□□□ -0.61
Nipbl-201ENSMUST00000052965 Cacna1dQ99246 2179 aa11.24□□□□□ -0.61
Nipbl-201ENSMUST00000052965 Kcng1A2BDX4 514 aa11.24□□□□□ -0.61
Nipbl-201ENSMUST00000052965 Pth1rP41593 591 aa11.24□□□□□ -0.61
Nipbl-201ENSMUST00000052965 Cct7P80313 544 aa11.24□□□□□ -0.61
Nipbl-201ENSMUST00000052965 Atp1b3P97370 278 aa11.24□□□□□ -0.61
Nipbl-201ENSMUST00000052965 XiapQ60989 496 aa11.24□□□□□ -0.61
Nipbl-201ENSMUST00000052965 Fxr1Q61584 677 aaKnown RBP11.24□□□□□ -0.61
Nipbl-201ENSMUST00000052965 Rmnd5bQ91YQ7 393 aa11.24□□□□□ -0.61
Nipbl-201ENSMUST00000052965 Smok2bQ9QYZ3 484 aa11.24□□□□□ -0.61
Nipbl-201ENSMUST00000052965 Smok2aQ9QYZ6 504 aa11.24□□□□□ -0.61
Nipbl-201ENSMUST00000052965 Sgo2bJ3QMK1 1167 aa11.24□□□□□ -0.61
Nipbl-201ENSMUST00000052965 Klc2O88448 599 aa11.24□□□□□ -0.61
Nipbl-201ENSMUST00000052965 ProcP33587 460 aa11.24□□□□□ -0.61
Nipbl-201ENSMUST00000052965 Runx2Q08775 607 aa11.24□□□□□ -0.61
Nipbl-201ENSMUST00000052965 Heatr9Q5QNV8 569 aa11.24□□□□□ -0.61
Nipbl-201ENSMUST00000052965 Senp6Q6P7W0 1132 aa11.24□□□□□ -0.61
Nipbl-201ENSMUST00000052965 Parp9Q8CAS9 866 aa11.24□□□□□ -0.61
Nipbl-201ENSMUST00000052965 Abcf3Q8K268 709 aa11.24□□□□□ -0.61
Nipbl-201ENSMUST00000052965 Lrrc59Q922Q8 307 aaKnown RBP11.24□□□□□ -0.61
Nipbl-201ENSMUST00000052965 Popdc2Q9ES82 367 aa11.24□□□□□ -0.61
Nipbl-201ENSMUST00000052965 Coro1cQ9WUM4 474 aa11.24□□□□□ -0.61
Nipbl-201ENSMUST00000052965 Col15a1O35206 1367 aa11.24□□□□□ -0.61
Nipbl-201ENSMUST00000052965 Ttc37F8VPK0 1563 aa11.24□□□□□ -0.61
Nipbl-201ENSMUST00000052965 Gm28961A0A087WPA5 222 aa11.24□□□□□ -0.61
Nipbl-201ENSMUST00000052965 Gm21858A0A087WQ24 222 aa11.24□□□□□ -0.61
Nipbl-201ENSMUST00000052965 Gm7168A0AUV4 508 aa11.24□□□□□ -0.61
Nipbl-201ENSMUST00000052965 F830016B08RikG3UWE2 416 aa11.24□□□□□ -0.61
Nipbl-201ENSMUST00000052965 Tfdp1Q08639 410 aa11.24□□□□□ -0.61
Nipbl-201ENSMUST00000052965 Ppp4r3cQ3V0Y1 813 aa11.24□□□□□ -0.61
Nipbl-201ENSMUST00000052965 Krt40Q6IFX3 439 aa11.24□□□□□ -0.61
Nipbl-201ENSMUST00000052965 Ccdc85bQ6PDY0 202 aa11.24□□□□□ -0.61
Nipbl-201ENSMUST00000052965 Asnsd1Q8BFS9 627 aa11.24□□□□□ -0.61
Nipbl-201ENSMUST00000052965 Gm3460E9QAI8 215 aa11.24□□□□□ -0.61
Nipbl-201ENSMUST00000052965 Nccrp1G3X9C2 266 aa11.24□□□□□ -0.61
Nipbl-201ENSMUST00000052965 Exosc10P56960 887 aaKnown RBP11.24□□□□□ -0.61
Nipbl-201ENSMUST00000052965 Npas2P97460 816 aa11.24□□□□□ -0.61
Nipbl-201ENSMUST00000052965 Ctdnep1Q3TP92 244 aa11.24□□□□□ -0.61
Nipbl-201ENSMUST00000052965 Tom1l2Q5SRX1 507 aa11.24□□□□□ -0.61
Nipbl-201ENSMUST00000052965 Gmeb1Q9JL60 562 aa11.24□□□□□ -0.61
Nipbl-201ENSMUST00000052965 Cyp4f40G3UW81 524 aa11.23□□□□□ -0.61
Nipbl-201ENSMUST00000052965 Hdgfl2Q3UMU9 669 aa11.23□□□□□ -0.61
Nipbl-201ENSMUST00000052965 Znf280cQ6P3Y5 742 aa11.23□□□□□ -0.61
Nipbl-201ENSMUST00000052965 Trim56Q80VI1 734 aaKnown RBP11.23□□□□□ -0.61
Nipbl-201ENSMUST00000052965 Cdkl2Q9QUK0 568 aa11.23□□□□□ -0.61
Nipbl-201ENSMUST00000052965 4930407I10RikD3Z5T8 1512 aa11.23□□□□□ -0.61
Nipbl-201ENSMUST00000052965 Fyb2A2A995 729 aa11.23□□□□□ -0.61
Nipbl-201ENSMUST00000052965 Rad51ap2G3UW63 976 aa11.23□□□□□ -0.61
Nipbl-201ENSMUST00000052965 Ephb2P54763 986 aa11.23□□□□□ -0.61
Nipbl-201ENSMUST00000052965 Sin3bQ62141 1098 aa11.23□□□□□ -0.61
Nipbl-201ENSMUST00000052965 Tmc8Q7TN58 722 aa11.23□□□□□ -0.61
Nipbl-201ENSMUST00000052965 Unc5bQ8K1S3 945 aa11.23□□□□□ -0.61
Nipbl-201ENSMUST00000052965 Depdc7Q91WS7 511 aa11.23□□□□□ -0.61
Nipbl-201ENSMUST00000052965 Trim66Q924W6 1242 aa11.23□□□□□ -0.61
Nipbl-201ENSMUST00000052965 P2rx7Q9Z1M0 595 aa11.23□□□□□ -0.61
Nipbl-201ENSMUST00000052965 Qtrt2B8ZXI1 415 aa11.23□□□□□ -0.61
Nipbl-201ENSMUST00000052965 Pagr1bF6V0H0 108 aa11.23□□□□□ -0.61
Nipbl-201ENSMUST00000052965 Gm3248K7N721 186 aa11.23□□□□□ -0.61
Nipbl-201ENSMUST00000052965 Gm4952Q5FW57 296 aa11.23□□□□□ -0.61
Nipbl-201ENSMUST00000052965 DcstampQ7TNJ0 470 aa11.23□□□□□ -0.61
Nipbl-201ENSMUST00000052965 Coq6Q8R1S0 476 aa11.23□□□□□ -0.61
Nipbl-201ENSMUST00000052965 Vps39Q8R5L3 886 aa11.23□□□□□ -0.61
Nipbl-201ENSMUST00000052965 Prpf6Q91YR7 941 aaKnown RBP11.23□□□□□ -0.61
Nipbl-201ENSMUST00000052965 Pagr1aQ99L02 253 aa11.23□□□□□ -0.61
Nipbl-201ENSMUST00000052965 Rsl24d1Q99L28 163 aa11.23□□□□□ -0.61
Nipbl-201ENSMUST00000052965 PgdQ9DCD0 483 aa11.23□□□□□ -0.61
Nipbl-201ENSMUST00000052965 Zfand4D3Z3C6 739 aa11.23□□□□□ -0.61
Nipbl-201ENSMUST00000052965 Olfr247E9PVJ7 320 aa11.23□□□□□ -0.61
Nipbl-201ENSMUST00000052965 Olfr819K7N727 320 aa11.23□□□□□ -0.61
Nipbl-201ENSMUST00000052965 RnaselQ05921 735 aa11.23□□□□□ -0.61
Retrieved 100 of 22,080 RNA–protein pairs in 33.1 ms