RNA–Protein interactions for RNA: ENSMUST00000035935.8

Ccdc40-201, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc40, Length 4,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-201ENSMUST00000035935 MyocO70624 490 aa10.87□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Mark2Q05512 776 aa10.87□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Prkaa1Q5EG47 559 aa10.87□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Caprin1Q60865 707 aaKnown RBP10.87□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Mxd3Q80US8 206 aa10.87□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Tmem117Q8BH18 514 aa10.87□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Cep57Q8CEE0 500 aa10.87□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 AdigQ8R400 80 aa10.87□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Ttc8Q8VD72 515 aa10.87□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Ddx47Q9CWX9 455 aaKnown RBP10.87□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Tlr5Q9JLF7 859 aa10.87□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Trpv2Q9WTR1 756 aa10.87□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Magea10A2AMW4 325 aa10.87□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Pola2P33611 600 aa10.87□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 PpargP37238 505 aa10.87□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Nol4P60954 483 aa10.87□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Cops2P61202 443 aaKnown RBP10.87□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Rad54lP70270 747 aa10.87□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Ccndbp1Q3TVC7 356 aa10.87□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Skap2Q3UND0 358 aa10.87□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Klra7Q60654 280 aa10.87□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Fbxo10Q7TQF2 950 aa10.87□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 SpidrQ8BGX7 933 aa10.87□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Gprc5cQ8K3J9 440 aa10.87□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Fgfr1op2Q9CRA9 253 aa10.87□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Rnaseh2aQ9CWY8 301 aa10.87□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Morf4l2Q9R0Q4 288 aa10.87□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Gm15262A0A140LIQ5 728 aa10.87□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 AurkbO70126 345 aa10.87□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Slc16a2O70324 545 aa10.87□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Stam2O88811 523 aa10.87□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Bace1P56818 501 aa10.87□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Rps6P62754 249 aaKnown RBP10.87□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Col6a1Q04857 1025 aa10.87□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Ccdc33Q3ULW6 985 aa10.87□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Atg9bQ6EBV9 922 aa10.87□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 SgczQ8BX51 311 aa10.87□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Osbpl2Q8BX94 484 aa10.87□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Plekhg6Q8R0J1 787 aa10.87□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Ska2Q9CR46 120 aa10.87□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Trpm3Q5F4S9 1721 aa10.87□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 RictorQ6QI06 1708 aa10.87□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Pja1O55176 578 aa10.87□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Fgl2P12804 432 aa10.87□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Serpinh1P19324 417 aaKnown RBP10.87□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Hcls1P49710 486 aaKnown RBP10.87□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Serpina5P70458 405 aa10.87□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Otud5Q3U2S4 566 aa10.87□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Rnpc3Q3UZ01 514 aaKnown RBP10.87□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Best3Q6H1V1 669 aa10.87□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Ip6k2Q80V72 448 aa10.87□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Ppme1Q8BVQ5 386 aa10.87□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Mill1Q8HWE7 395 aa10.87□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 MyripQ8K3I4 856 aa10.87□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Taf6lQ8R2K4 616 aa10.87□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Vps39Q8R5L3 886 aa10.87□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Olfr805Q8VFI4 319 aa10.87□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Cdc42ep4Q9JM96 349 aaKnown RBP10.87□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Chd4Q6PDQ2 1915 aaKnown RBP10.87□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Ccdc153P0C7Q1 202 aa10.86□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Tmem39bQ810L4 492 aa10.86□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Dcun1d2Q8BZJ7 259 aa10.86□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Nudcd3Q8R1N4 363 aa10.86□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Nrbf2Q8VCQ3 287 aa10.86□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Tmco4Q91WU4 631 aa10.86□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Nfat5Q9WV30 1534 aa10.86□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 JcadQ5DTX6 1320 aa10.86□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Ankfn1A0A140LIW7 1083 aa10.86□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Flvcr1B2RXV4 560 aa10.86□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Tbx3P70324 741 aa10.86□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Nell2Q61220 819 aa10.86□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Gemin4Q6P6L6 1058 aaKnown RBP10.86□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Rassf6Q80UQ2 353 aa10.86□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Rbbp5Q8BX09 538 aaKnown RBP10.86□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Tmem145Q8C4U2 746 aa10.86□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Inpp5bQ8K337 993 aa10.86□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Tex9Q9D845 387 aa10.86□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Itgb1bp2Q9R000 350 aa10.86□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Bub1bQ9Z1S0 1052 aa10.86□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Apol8A2VDH7 339 aaKnown RBP10.86□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Atp2c2A7L9Z8 944 aa10.86□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Cyp2c69E9PXC3 491 aa10.86□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Farp1F8VPU2 1048 aa10.86□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Atxn10P28658 475 aa10.86□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Cyp2c40P56657 491 aa10.86□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Atp9bP98195 1146 aa10.86□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Lrrc55Q3UY51 311 aa10.86□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Ptk6Q64434 451 aa10.86□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Tdpoz4Q6YCH2 370 aa10.86□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 EtnpplQ8BWU8 499 aa10.86□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Wbp11Q923D5 641 aaKnown RBP10.86□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Hars2Q99KK9 505 aa10.86□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 1700129C05RikQ9CQ77 218 aa10.86□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Dbn1Q9QXS6 706 aa10.86□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Sipa1l1Q8C0T5 1782 aa10.86□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Aff1O88573 1216 aa10.86□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Mt-CybP00158 381 aa10.86□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Prl3b1P09586 222 aa10.86□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 Mup5P11591 180 aa10.86□□□□□ -0.67
Ccdc40-201ENSMUST00000035935 YdjcQ14BV6 310 aa10.86□□□□□ -0.67
Retrieved 100 of 22,080 RNA–protein pairs in 21.3 ms