RNA–Protein interactions for RNA: ENSMUST00000035283.10

Nup88-201, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,450 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-201ENSMUST00000035283 Vmn1r64Q8R2B8 320 aa14.29□□□□□ -0.12
Nup88-201ENSMUST00000035283 Trmt10bQ9D075 318 aa14.29□□□□□ -0.12
Nup88-201ENSMUST00000035283 Rsc1a1Q9ER99 582 aa14.29□□□□□ -0.12
Nup88-201ENSMUST00000035283 Mmrn2A6H6E2 943 aa14.29□□□□□ -0.12
Nup88-201ENSMUST00000035283 Ildr2B5TVM2 661 aa14.29□□□□□ -0.12
Nup88-201ENSMUST00000035283 Ifi207E9Q3L4 978 aa14.29□□□□□ -0.12
Nup88-201ENSMUST00000035283 Taf4bG5E8Z2 855 aa14.29□□□□□ -0.12
Nup88-201ENSMUST00000035283 Gm7995L7N2E4 160 aa14.29□□□□□ -0.12
Nup88-201ENSMUST00000035283 Slc27a2O35488 620 aa14.29□□□□□ -0.12
Nup88-201ENSMUST00000035283 E2f6O54917 272 aa14.29□□□□□ -0.12
Nup88-201ENSMUST00000035283 Sema6bO54951 886 aa14.29□□□□□ -0.12
Nup88-201ENSMUST00000035283 EnahQ03173 802 aa14.29□□□□□ -0.12
Nup88-201ENSMUST00000035283 Lmntd2Q0VET5 664 aa14.29□□□□□ -0.12
Nup88-201ENSMUST00000035283 Pbxip1Q3TVI8 727 aa14.29□□□□□ -0.12
Nup88-201ENSMUST00000035283 Cyb5d1Q5NCY3 228 aa14.29□□□□□ -0.12
Nup88-201ENSMUST00000035283 Gbp4Q61107 620 aa14.29□□□□□ -0.12
Nup88-201ENSMUST00000035283 Ddhd1Q80YA3 547 aa14.29□□□□□ -0.12
Nup88-201ENSMUST00000035283 Dus1lQ8C2P3 475 aa14.29□□□□□ -0.12
Nup88-201ENSMUST00000035283 Vps36Q91XD6 386 aa14.29□□□□□ -0.12
Nup88-201ENSMUST00000035283 Iqcf1Q9D9K8 182 aa14.29□□□□□ -0.12
Nup88-201ENSMUST00000035283 Fundc1Q9DB70 155 aa14.29□□□□□ -0.12
Nup88-201ENSMUST00000035283 Plxnb2B2RXS4 1842 aa14.28□□□□□ -0.12
Nup88-201ENSMUST00000035283 Fyb2A2A995 729 aa14.28□□□□□ -0.12
Nup88-201ENSMUST00000035283 DgkhD3YXJ0 1156 aa14.28□□□□□ -0.12
Nup88-201ENSMUST00000035283 RpsaP14206 295 aaKnown RBP14.28□□□□□ -0.12
Nup88-201ENSMUST00000035283 Ankmy2Q3TPE9 440 aa14.28□□□□□ -0.12
Nup88-201ENSMUST00000035283 Fam193bQ3U2K0 892 aa14.28□□□□□ -0.12
Nup88-201ENSMUST00000035283 Gpr156Q6PCP7 798 aa14.28□□□□□ -0.12
Nup88-201ENSMUST00000035283 Ankzf1Q80UU1 748 aaKnown RBP14.28□□□□□ -0.12
Nup88-201ENSMUST00000035283 Znf879Q8BI99 563 aa14.28□□□□□ -0.12
Nup88-201ENSMUST00000035283 Sun2Q8BJS4 731 aa14.28□□□□□ -0.12
Nup88-201ENSMUST00000035283 Acbd3Q8BMP6 525 aa14.28□□□□□ -0.12
Nup88-201ENSMUST00000035283 Heatr3Q8BQM4 679 aa14.28□□□□□ -0.12
Nup88-201ENSMUST00000035283 Plcg2Q8CIH5 1265 aa14.28□□□□□ -0.12
Nup88-201ENSMUST00000035283 Pls3Q99K51 630 aa14.28□□□□□ -0.12
Nup88-201ENSMUST00000035283 Olfr310B2RVZ1 332 aa14.27□□□□□ -0.12
Nup88-201ENSMUST00000035283 Drp2Q05AA6 957 aa14.27□□□□□ -0.12
Nup88-201ENSMUST00000035283 Spata18Q0P557 537 aa14.27□□□□□ -0.12
Nup88-201ENSMUST00000035283 AlcamQ61490 583 aa14.27□□□□□ -0.12
Nup88-201ENSMUST00000035283 Fbxo28Q8BIG4 368 aa14.27□□□□□ -0.12
Nup88-201ENSMUST00000035283 Olfml3Q8BK62 406 aa14.27□□□□□ -0.12
Nup88-201ENSMUST00000035283 Ldlrap1Q8C142 308 aa14.27□□□□□ -0.12
Nup88-201ENSMUST00000035283 Dtnbp1Q91WZ8 352 aa14.27□□□□□ -0.12
Nup88-201ENSMUST00000035283 Tex9Q9D845 387 aa14.27□□□□□ -0.12
Nup88-201ENSMUST00000035283 Cyp2s1Q9DBX6 501 aa14.27□□□□□ -0.12
Nup88-201ENSMUST00000035283 Clec4aQ9QZ15 238 aa14.27□□□□□ -0.12
Nup88-201ENSMUST00000035283 Atp6v1g2Q9WTT4 118 aa14.27□□□□□ -0.12
Nup88-201ENSMUST00000035283 SynrgQ5SV85 1306 aa14.27□□□□□ -0.12
Nup88-201ENSMUST00000035283 Pds5aQ6A026 1332 aa14.27□□□□□ -0.12
Nup88-201ENSMUST00000035283 Wnt7bP28047 349 aa14.27□□□□□ -0.13
Nup88-201ENSMUST00000035283 Churc1Q6DG52 112 aa14.27□□□□□ -0.13
Nup88-201ENSMUST00000035283 Ccdc117Q6PB51 277 aa14.27□□□□□ -0.13
Nup88-201ENSMUST00000035283 Klhl11Q8CE33 709 aa14.27□□□□□ -0.13
Nup88-201ENSMUST00000035283 Sh2d5Q8JZW5 429 aa14.27□□□□□ -0.13
Nup88-201ENSMUST00000035283 Bst2Q8R2Q8 172 aa14.27□□□□□ -0.13
Nup88-201ENSMUST00000035283 Lrrc8cQ8R502 803 aa14.27□□□□□ -0.13
Nup88-201ENSMUST00000035283 Pcdha10Q91Y20 946 aa14.27□□□□□ -0.13
Nup88-201ENSMUST00000035283 Pgm1Q9D0F9 562 aa14.27□□□□□ -0.13
Nup88-201ENSMUST00000035283 Kcnh7Q9ER47 1195 aa14.27□□□□□ -0.13
Nup88-201ENSMUST00000035283 Adrm1Q9JKV1 407 aa14.27□□□□□ -0.13
Nup88-201ENSMUST00000035283 PnkpQ9JLV6 522 aaKnown RBP14.27□□□□□ -0.13
Nup88-201ENSMUST00000035283 Clcn2Q9R0A1 908 aa14.27□□□□□ -0.13
Nup88-201ENSMUST00000035283 Olfr247E9PVJ7 320 aa14.26□□□□□ -0.13
Nup88-201ENSMUST00000035283 Gm5795E9PZN8 263 aa14.26□□□□□ -0.13
Nup88-201ENSMUST00000035283 Olfr819K7N727 320 aa14.26□□□□□ -0.13
Nup88-201ENSMUST00000035283 UgcgO88693 394 aa14.26□□□□□ -0.13
Nup88-201ENSMUST00000035283 Alkbh1P0CB42 389 aa14.26□□□□□ -0.13
Nup88-201ENSMUST00000035283 Hcls1P49710 486 aaKnown RBP14.26□□□□□ -0.13
Nup88-201ENSMUST00000035283 Ccng1P51945 294 aa14.26□□□□□ -0.13
Nup88-201ENSMUST00000035283 Gbp1Q01514 589 aa14.26□□□□□ -0.13
Nup88-201ENSMUST00000035283 Ttc39dQ0VF76 604 aa14.26□□□□□ -0.13
Nup88-201ENSMUST00000035283 SpoplQ2M2N2 392 aa14.26□□□□□ -0.13
Nup88-201ENSMUST00000035283 Atp13a5Q3TYU2 1216 aa14.26□□□□□ -0.13
Nup88-201ENSMUST00000035283 P4ha1Q60715 534 aa14.26□□□□□ -0.13
Nup88-201ENSMUST00000035283 Hook3Q8BUK6 718 aa14.26□□□□□ -0.13
Nup88-201ENSMUST00000035283 Trmt13Q8BYH3 481 aa14.26□□□□□ -0.13
Nup88-201ENSMUST00000035283 Kcnv2Q8CFS6 562 aa14.26□□□□□ -0.13
Nup88-201ENSMUST00000035283 Tmem81Q9D5K1 259 aa14.26□□□□□ -0.13
Nup88-201ENSMUST00000035283 Rnf6Q9DBU5 667 aa14.26□□□□□ -0.13
Nup88-201ENSMUST00000035283 PygmQ9WUB3 842 aaKnown RBP14.26□□□□□ -0.13
Nup88-201ENSMUST00000035283 SrcapA0A087WQ44 3271 aa14.26□□□□□ -0.13
Nup88-201ENSMUST00000035283 Tada2bD3Z4Z0 420 aaKnown RBP14.26□□□□□ -0.13
Nup88-201ENSMUST00000035283 Tbc1d10aP58802 500 aa14.26□□□□□ -0.13
Nup88-201ENSMUST00000035283 Gtf2bP62915 316 aa14.26□□□□□ -0.13
Nup88-201ENSMUST00000035283 Dab2P98078 766 aa14.26□□□□□ -0.13
Nup88-201ENSMUST00000035283 Gja5Q01231 358 aa14.26□□□□□ -0.13
Nup88-201ENSMUST00000035283 Rmdn3Q3UJU9 470 aa14.26□□□□□ -0.13
Nup88-201ENSMUST00000035283 Prr18Q6PAN7 307 aa14.26□□□□□ -0.13
Nup88-201ENSMUST00000035283 Creb3l2Q8BH52 521 aa14.26□□□□□ -0.13
Nup88-201ENSMUST00000035283 Ppm1kQ8BXN7 372 aa14.26□□□□□ -0.13
Nup88-201ENSMUST00000035283 Cyp39a1Q9JKJ9 470 aa14.26□□□□□ -0.13
Nup88-201ENSMUST00000035283 Zscan4-ps3A0A1B0GRH6 506 aa14.25□□□□□ -0.13
Nup88-201ENSMUST00000035283 Zscan4-ps2A0A1C7CYU6 506 aa14.25□□□□□ -0.13
Nup88-201ENSMUST00000035283 C87977A2A958 498 aa14.25□□□□□ -0.13
Nup88-201ENSMUST00000035283 Grik3B1AS29 919 aa14.25□□□□□ -0.13
Nup88-201ENSMUST00000035283 Gm6583E9Q8Z1 469 aa14.25□□□□□ -0.13
Nup88-201ENSMUST00000035283 Banf1O54962 89 aa14.25□□□□□ -0.13
Nup88-201ENSMUST00000035283 UrosP51163 265 aa14.25□□□□□ -0.13
Nup88-201ENSMUST00000035283 Sem1P60897 70 aa14.25□□□□□ -0.13
Nup88-201ENSMUST00000035283 Nat8lQ3UGX3 299 aa14.25□□□□□ -0.13
Retrieved 100 of 22,080 RNA–protein pairs in 51.3 ms