RNA–Protein interactions for RNA: ENSMUST00000034060.6

Sh3rf1-201, Transcript of E3 ubiquitin-protein ligase SH3RF1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sh3rf1, Length 5,479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1-201ENSMUST00000034060 Mtmr6Q8VE11 617 aa24.32■■□□□ 1.48
Sh3rf1-201ENSMUST00000034060 Atp5dQ9D3D9 168 aa24.32■■□□□ 1.48
Sh3rf1-201ENSMUST00000034060 Myl2P51667 166 aa24.31■■□□□ 1.48
Sh3rf1-201ENSMUST00000034060 Rasa2P58069 847 aa24.31■■□□□ 1.48
Sh3rf1-201ENSMUST00000034060 Polr1bP70700 1135 aa24.31■■□□□ 1.48
Sh3rf1-201ENSMUST00000034060 Foxred2Q3USW5 665 aa24.31■■□□□ 1.48
Sh3rf1-201ENSMUST00000034060 Otub1Q7TQI3 271 aa24.31■■□□□ 1.48
Sh3rf1-201ENSMUST00000034060 Q8BP99 230 aa24.31■■□□□ 1.48
Sh3rf1-201ENSMUST00000034060 LzicQ8K3C3 190 aa24.31■■□□□ 1.48
Sh3rf1-201ENSMUST00000034060 Akr1c14Q91WT7 323 aa24.31■■□□□ 1.48
Sh3rf1-201ENSMUST00000034060 Mis18aQ9CZJ6 204 aa24.31■■□□□ 1.48
Sh3rf1-201ENSMUST00000034060 Speer4cG3UXD1 256 aa24.31■■□□□ 1.48
Sh3rf1-201ENSMUST00000034060 Gm10354K7N6A0 256 aa24.31■■□□□ 1.48
Sh3rf1-201ENSMUST00000034060 SftpdP50404 374 aa24.31■■□□□ 1.48
Sh3rf1-201ENSMUST00000034060 Faf2Q3TDN2 445 aa24.31■■□□□ 1.48
Sh3rf1-201ENSMUST00000034060 IscuQ9D7P6 168 aa24.31■■□□□ 1.48
Sh3rf1-201ENSMUST00000034060 Sertad1Q9JL10 236 aa24.31■■□□□ 1.48
Sh3rf1-201ENSMUST00000034060 Slc26a4Q9R155 780 aa24.31■■□□□ 1.48
Sh3rf1-201ENSMUST00000034060 Sema4dO09126 861 aa24.31■■□□□ 1.48
Sh3rf1-201ENSMUST00000034060 Fhod1Q6P9Q4 1197 aa24.31■■□□□ 1.48
Sh3rf1-201ENSMUST00000034060 Ints2Q80UK8 1198 aa24.31■■□□□ 1.48
Sh3rf1-201ENSMUST00000034060 Kirrel3Q8BR86 778 aa24.31■■□□□ 1.48
Sh3rf1-201ENSMUST00000034060 Fam160b1Q8CDM8 764 aa24.31■■□□□ 1.48
Sh3rf1-201ENSMUST00000034060 Psmd9Q9CR00 222 aa24.31■■□□□ 1.48
Sh3rf1-201ENSMUST00000034060 Csn1s1P19228 313 aa24.31■■□□□ 1.48
Sh3rf1-201ENSMUST00000034060 Vmn1r209Q5NC97 312 aa24.31■■□□□ 1.48
Sh3rf1-201ENSMUST00000034060 Nmrk1Q91W63 195 aa24.31■■□□□ 1.48
Sh3rf1-201ENSMUST00000034060 Haus8Q99L00 373 aa24.31■■□□□ 1.48
Sh3rf1-201ENSMUST00000034060 H2afyQ9QZQ8 372 aaKnown RBP24.31■■□□□ 1.48
Sh3rf1-201ENSMUST00000034060 Flt4P35917 1363 aa24.31■■□□□ 1.48
Sh3rf1-201ENSMUST00000034060 Arhgef37A1IGU4 676 aa24.31■■□□□ 1.48
Sh3rf1-201ENSMUST00000034060 Usp4P35123 962 aa24.31■■□□□ 1.48
Sh3rf1-201ENSMUST00000034060 Deup1Q7M6Y5 601 aa24.31■■□□□ 1.48
Sh3rf1-201ENSMUST00000034060 Serpina3bQ8BYY9 420 aa24.31■■□□□ 1.48
Sh3rf1-201ENSMUST00000034060 N4bp3Q8C7U1 537 aa24.31■■□□□ 1.48
Sh3rf1-201ENSMUST00000034060 Spice1Q8C804 860 aa24.31■■□□□ 1.48
Sh3rf1-201ENSMUST00000034060 Anxa13Q99JG3 317 aa24.31■■□□□ 1.48
Sh3rf1-201ENSMUST00000034060 Ggps1Q9WTN0 300 aa24.31■■□□□ 1.48
Sh3rf1-201ENSMUST00000034060 CidebO70303 219 aa24.3■■□□□ 1.48
Sh3rf1-201ENSMUST00000034060 Armcx5Q3UZB0 606 aa24.3■■□□□ 1.48
Sh3rf1-201ENSMUST00000034060 Dsg1aQ61495 1057 aa24.3■■□□□ 1.48
Sh3rf1-201ENSMUST00000034060 Avpr1aQ62463 423 aa24.3■■□□□ 1.48
Sh3rf1-201ENSMUST00000034060 Q6GQU0 248 aa24.3■■□□□ 1.48
Sh3rf1-201ENSMUST00000034060 Pspc1Q8R326 523 aaKnown RBP24.3■■□□□ 1.48
Sh3rf1-201ENSMUST00000034060 Sh2d4aQ9D7V1 421 aa24.3■■□□□ 1.48
Sh3rf1-201ENSMUST00000034060 Slc25a13Q9QXX4 676 aa24.3■■□□□ 1.48
Sh3rf1-201ENSMUST00000034060 Slc22a3Q9WTW5 551 aa24.3■■□□□ 1.48
Sh3rf1-201ENSMUST00000034060 CraddO88843 199 aa24.3■■□□□ 1.48
Sh3rf1-201ENSMUST00000034060 HexdcQ3U4H6 486 aa24.3■■□□□ 1.48
Sh3rf1-201ENSMUST00000034060 Pitpnm3Q3UHE1 974 aa24.3■■□□□ 1.48
Sh3rf1-201ENSMUST00000034060 Q6DFW0 481 aa24.3■■□□□ 1.48
Sh3rf1-201ENSMUST00000034060 Grk2Q99MK8 689 aa24.3■■□□□ 1.48
Sh3rf1-201ENSMUST00000034060 Pole3Q9JKP7 145 aa24.3■■□□□ 1.48
Sh3rf1-201ENSMUST00000034060 Dctn3Q9Z0Y1 186 aa24.3■■□□□ 1.48
Sh3rf1-201ENSMUST00000034060 Gm13023A2A8N2 498 aa24.3■■□□□ 1.48
Sh3rf1-201ENSMUST00000034060 Qrich1Q3UA37 777 aa24.3■■□□□ 1.48
Sh3rf1-201ENSMUST00000034060 Trim31Q8R0K2 507 aa24.3■■□□□ 1.48
Sh3rf1-201ENSMUST00000034060 Ino80Q6ZPV2 1559 aa24.3■■□□□ 1.48
Sh3rf1-201ENSMUST00000034060 Gm16430A6X8J1 155 aa24.3■■□□□ 1.48
Sh3rf1-201ENSMUST00000034060 1700024B05RikE9Q6D7 167 aa24.3■■□□□ 1.48
Sh3rf1-201ENSMUST00000034060 Eif3dO70194 548 aaKnown RBP24.3■■□□□ 1.48
Sh3rf1-201ENSMUST00000034060 Slc13a5Q67BT3 572 aa24.3■■□□□ 1.48
Sh3rf1-201ENSMUST00000034060 Gpt2Q8BGT5 522 aa24.3■■□□□ 1.48
Sh3rf1-201ENSMUST00000034060 Efl1Q8C0D5 1127 aa24.3■■□□□ 1.48
Sh3rf1-201ENSMUST00000034060 Dnajc28Q8VCE1 385 aa24.3■■□□□ 1.48
Sh3rf1-201ENSMUST00000034060 C2cd2E9Q3C1 696 aa24.29■■□□□ 1.48
Sh3rf1-201ENSMUST00000034060 Ccdc127Q3TC33 260 aa24.29■■□□□ 1.48
Sh3rf1-201ENSMUST00000034060 Sh3gl2Q62420 352 aa24.29■■□□□ 1.48
Sh3rf1-201ENSMUST00000034060 Tdpoz4Q6YCH2 370 aa24.29■■□□□ 1.48
Sh3rf1-201ENSMUST00000034060 Gemin5Q8BX17 1502 aaKnown RBP24.29■■□□□ 1.48
Sh3rf1-201ENSMUST00000034060 Orm2P07361 207 aa24.29■■□□□ 1.48
Sh3rf1-201ENSMUST00000034060 NyxP83503 476 aa24.29■■□□□ 1.48
Sh3rf1-201ENSMUST00000034060 Llgl1Q80Y17 1036 aa24.29■■□□□ 1.48
Sh3rf1-201ENSMUST00000034060 Rbbp8Q80YR6 893 aa24.29■■□□□ 1.48
Sh3rf1-201ENSMUST00000034060 Pabpc6Q9D4E6 643 aaKnown RBP24.29■■□□□ 1.48
Sh3rf1-201ENSMUST00000034060 TcimQ9D915 106 aa24.29■■□□□ 1.48
Sh3rf1-201ENSMUST00000034060 Phtf1Q9QZ09 761 aa24.29■■□□□ 1.48
Sh3rf1-201ENSMUST00000034060 Gm11983V9GXS8 105 aa24.29■■□□□ 1.48
Sh3rf1-201ENSMUST00000034060 Ccnd1P25322 295 aa24.29■■□□□ 1.48
Sh3rf1-201ENSMUST00000034060 SpdyaQ5IBH7 310 aa24.29■■□□□ 1.48
Sh3rf1-201ENSMUST00000034060 Ube2q2Q8K2Z8 378 aa24.29■■□□□ 1.48
Sh3rf1-201ENSMUST00000034060 Irak4Q8R4K2 459 aa24.29■■□□□ 1.48
Sh3rf1-201ENSMUST00000034060 Tti1Q91V83 1085 aa24.29■■□□□ 1.48
Sh3rf1-201ENSMUST00000034060 PtprcP06800 1291 aa24.28■■□□□ 1.48
Sh3rf1-201ENSMUST00000034060 RetsatQ64FW2 609 aa24.28■■□□□ 1.48
Sh3rf1-201ENSMUST00000034060 Susd4Q8BH32 490 aa24.28■■□□□ 1.48
Sh3rf1-201ENSMUST00000034060 Fbxo44Q8BK26 255 aa24.28■■□□□ 1.48
Sh3rf1-201ENSMUST00000034060 Ago2Q8CJG0 860 aaKnown RBP24.28■■□□□ 1.48
Sh3rf1-201ENSMUST00000034060 Olfr866Q8VFI7 312 aa24.28■■□□□ 1.48
Sh3rf1-201ENSMUST00000034060 MydgfQ9CPT4 166 aa24.28■■□□□ 1.48
Sh3rf1-201ENSMUST00000034060 Sapcd2Q9D818 391 aa24.28■■□□□ 1.48
Sh3rf1-201ENSMUST00000034060 Nme3Q9WV85 169 aa24.28■■□□□ 1.48
Sh3rf1-201ENSMUST00000034060 Top3bQ9Z321 862 aaKnown RBP24.28■■□□□ 1.48
Sh3rf1-201ENSMUST00000034060 Gm5861F6VCN9 180 aa24.28■■□□□ 1.48
Sh3rf1-201ENSMUST00000034060 4933402N22RikF7D1B3 190 aa24.28■■□□□ 1.48
Sh3rf1-201ENSMUST00000034060 Ifi206G3UZV2 921 aa24.28■■□□□ 1.48
Sh3rf1-201ENSMUST00000034060 Epas1P97481 874 aa24.28■■□□□ 1.48
Sh3rf1-201ENSMUST00000034060 Asprv1Q09PK2 339 aa24.28■■□□□ 1.48
Sh3rf1-201ENSMUST00000034060 Dmc1Q61880 340 aa24.28■■□□□ 1.48
Sh3rf1-201ENSMUST00000034060 Rhpn2Q8BWR8 686 aa24.28■■□□□ 1.48
Retrieved 100 of 22,080 RNA–protein pairs in 29.7 ms