RNA–Protein interactions for RNA: ENSMUST00000022225.11

Trim23-201, Transcript of E3 ubiquitin-protein ligase TRIM23, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim23, Length 3,416 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim23-201ENSMUST00000022225 Gimap5Q8BWF2 308 aa13.09□□□□□ -0.31
Trim23-201ENSMUST00000022225 Svs3bQ8BZH8 265 aa13.09□□□□□ -0.31
Trim23-201ENSMUST00000022225 SucoQ8C341 1250 aa13.09□□□□□ -0.31
Trim23-201ENSMUST00000022225 Znf276Q8CE64 614 aa13.09□□□□□ -0.31
Trim23-201ENSMUST00000022225 Zfp263Q8CF60 680 aa13.09□□□□□ -0.31
Trim23-201ENSMUST00000022225 Rfc4Q99J62 364 aa13.09□□□□□ -0.31
Trim23-201ENSMUST00000022225 Wdr83Q9DAJ4 315 aaKnown RBP13.09□□□□□ -0.31
Trim23-201ENSMUST00000022225 ParvgQ9ERD8 331 aa13.09□□□□□ -0.31
Trim23-201ENSMUST00000022225 Ccnt1Q9QWV9 724 aaKnown RBP13.09□□□□□ -0.31
Trim23-201ENSMUST00000022225 Actl7bQ9QY83 418 aa13.09□□□□□ -0.31
Trim23-201ENSMUST00000022225 Angptl2Q9R045 493 aa13.09□□□□□ -0.31
Trim23-201ENSMUST00000022225 Rasgrp1Q9Z1S3 795 aa13.09□□□□□ -0.31
Trim23-201ENSMUST00000022225 Robo3Q9Z2I4 1366 aa13.09□□□□□ -0.31
Trim23-201ENSMUST00000022225 Nup98Q6PFD9 1816 aaKnown RBP13.09□□□□□ -0.31
Trim23-201ENSMUST00000022225 1700029H14RikE9PY36 240 aa13.09□□□□□ -0.31
Trim23-201ENSMUST00000022225 Art2bO35975 289 aa13.09□□□□□ -0.31
Trim23-201ENSMUST00000022225 Fam172aQ3TNH5 417 aa13.09□□□□□ -0.31
Trim23-201ENSMUST00000022225 P3h1Q3V1T4 739 aa13.09□□□□□ -0.31
Trim23-201ENSMUST00000022225 IgflQ6B9Z0 140 aa13.09□□□□□ -0.31
Trim23-201ENSMUST00000022225 Kcnt1Q6ZPR4 1224 aa13.09□□□□□ -0.31
Trim23-201ENSMUST00000022225 Susd4Q8BH32 490 aa13.09□□□□□ -0.31
Trim23-201ENSMUST00000022225 Olfr449Q8VGW8 311 aa13.09□□□□□ -0.31
Trim23-201ENSMUST00000022225 Lrp8Q924X6 996 aa13.09□□□□□ -0.31
Trim23-201ENSMUST00000022225 Def8Q99J78 448 aa13.09□□□□□ -0.31
Trim23-201ENSMUST00000022225 A630010A05RikA9C473 232 aa13.09□□□□□ -0.31
Trim23-201ENSMUST00000022225 Adcy8P97490 1249 aa13.09□□□□□ -0.31
Trim23-201ENSMUST00000022225 4930430A15RikQ05AC5 485 aa13.09□□□□□ -0.31
Trim23-201ENSMUST00000022225 AcadsQ07417 412 aaKnown RBP13.09□□□□□ -0.31
Trim23-201ENSMUST00000022225 Slc2a13Q3UHK1 637 aa13.09□□□□□ -0.31
Trim23-201ENSMUST00000022225 Rnf10Q3UIW5 804 aa13.09□□□□□ -0.31
Trim23-201ENSMUST00000022225 Zcwpw1Q6IR42 630 aa13.09□□□□□ -0.31
Trim23-201ENSMUST00000022225 Prr18Q6PAN7 307 aa13.09□□□□□ -0.31
Trim23-201ENSMUST00000022225 Zfp438Q8BFX2 798 aa13.09□□□□□ -0.31
Trim23-201ENSMUST00000022225 Daam1Q8BPM0 1077 aa13.09□□□□□ -0.31
Trim23-201ENSMUST00000022225 Clic5Q8BXK9 251 aa13.09□□□□□ -0.31
Trim23-201ENSMUST00000022225 Rpap2Q8VC34 614 aa13.09□□□□□ -0.31
Trim23-201ENSMUST00000022225 Farp2Q91VS8 1065 aa13.09□□□□□ -0.31
Trim23-201ENSMUST00000022225 Rin1Q921Q7 763 aa13.09□□□□□ -0.31
Trim23-201ENSMUST00000022225 Psmd8Q9CX56 353 aa13.09□□□□□ -0.31
Trim23-201ENSMUST00000022225 PygmQ9WUB3 842 aaKnown RBP13.09□□□□□ -0.31
Trim23-201ENSMUST00000022225 MycsQ9Z304 431 aa13.09□□□□□ -0.31
Trim23-201ENSMUST00000022225 Gbp6A0A0G2JDV3 611 aa13.08□□□□□ -0.32
Trim23-201ENSMUST00000022225 Gm8298J3QPI0 401 aa13.08□□□□□ -0.32
Trim23-201ENSMUST00000022225 Gm43302L7N1X8 611 aa13.08□□□□□ -0.32
Trim23-201ENSMUST00000022225 LynP25911 512 aa13.08□□□□□ -0.32
Trim23-201ENSMUST00000022225 Rhbdl3P58873 404 aa13.08□□□□□ -0.32
Trim23-201ENSMUST00000022225 Lilrb3P97484 841 aa13.08□□□□□ -0.32
Trim23-201ENSMUST00000022225 Uroc1Q8VC12 676 aa13.08□□□□□ -0.32
Trim23-201ENSMUST00000022225 Sh3bp5lQ99LH9 392 aa13.08□□□□□ -0.32
Trim23-201ENSMUST00000022225 Fam90a1bQ9D4F3 419 aa13.08□□□□□ -0.32
Trim23-201ENSMUST00000022225 Dlc1Q9R0Z9 1092 aa13.08□□□□□ -0.32
Trim23-201ENSMUST00000022225 Ptpn4Q9WU22 926 aa13.08□□□□□ -0.32
Trim23-201ENSMUST00000022225 Zfp984A2A7A2 547 aa13.08□□□□□ -0.32
Trim23-201ENSMUST00000022225 Zfp266E9Q2S7 604 aa13.08□□□□□ -0.32
Trim23-201ENSMUST00000022225 Rpl21O09167 160 aaKnown RBP13.08□□□□□ -0.32
Trim23-201ENSMUST00000022225 Slc27a2O35488 620 aa13.08□□□□□ -0.32
Trim23-201ENSMUST00000022225 Syt2P46097 422 aa13.08□□□□□ -0.32
Trim23-201ENSMUST00000022225 Psmc2P46471 433 aa13.08□□□□□ -0.32
Trim23-201ENSMUST00000022225 Tmem63bQ3TWI9 832 aa13.08□□□□□ -0.32
Trim23-201ENSMUST00000022225 Gm8773Q3UQ24 132 aa13.08□□□□□ -0.32
Trim23-201ENSMUST00000022225 SpopQ6ZWS8 374 aa13.08□□□□□ -0.32
Trim23-201ENSMUST00000022225 Usp1Q8BJQ2 784 aa13.08□□□□□ -0.32
Trim23-201ENSMUST00000022225 Plch1Q4KWH5 1682 aa13.07□□□□□ -0.32
Trim23-201ENSMUST00000022225 Galntl6E5D8G1 601 aa13.07□□□□□ -0.32
Trim23-201ENSMUST00000022225 Fdft1P53798 416 aa13.07□□□□□ -0.32
Trim23-201ENSMUST00000022225 Foxp2P58463 714 aa13.07□□□□□ -0.32
Trim23-201ENSMUST00000022225 GnpatP98192 678 aa13.07□□□□□ -0.32
Trim23-201ENSMUST00000022225 CcnhQ61458 323 aa13.07□□□□□ -0.32
Trim23-201ENSMUST00000022225 Slf2Q6P9P0 1278 aa13.07□□□□□ -0.32
Trim23-201ENSMUST00000022225 Nyap1Q6PFX7 833 aa13.07□□□□□ -0.32
Trim23-201ENSMUST00000022225 Mfn1Q811U4 741 aa13.07□□□□□ -0.32
Trim23-201ENSMUST00000022225 Stk32aQ8BGW6 398 aa13.07□□□□□ -0.32
Trim23-201ENSMUST00000022225 Onecut3Q8K557 490 aa13.07□□□□□ -0.32
Trim23-201ENSMUST00000022225 Uba5Q8VE47 403 aa13.07□□□□□ -0.32
Trim23-201ENSMUST00000022225 Itm2cQ91VK4 269 aa13.07□□□□□ -0.32
Trim23-201ENSMUST00000022225 Nmd3Q99L48 503 aaKnown RBP13.07□□□□□ -0.32
Trim23-201ENSMUST00000022225 Rbm31yQ9D3U4 565 aa13.07□□□□□ -0.32
Trim23-201ENSMUST00000022225 Capn12Q9ER56 720 aa13.07□□□□□ -0.32
Trim23-201ENSMUST00000022225 Znf354bQ9QXT9 601 aa13.07□□□□□ -0.32
Trim23-201ENSMUST00000022225 Plekhg2Q6KAU7 1340 aa13.07□□□□□ -0.32
Trim23-201ENSMUST00000022225 Cd151O35566 253 aa13.07□□□□□ -0.32
Trim23-201ENSMUST00000022225 Tspyl1O88852 379 aa13.07□□□□□ -0.32
Trim23-201ENSMUST00000022225 SagP20443 403 aa13.07□□□□□ -0.32
Trim23-201ENSMUST00000022225 InhbcP55104 352 aa13.07□□□□□ -0.32
Trim23-201ENSMUST00000022225 Arhgap45Q3TBD2 1116 aa13.07□□□□□ -0.32
Trim23-201ENSMUST00000022225 Wdr41Q3UDP0 460 aa13.07□□□□□ -0.32
Trim23-201ENSMUST00000022225 Slc9b2Q5BKR2 547 aa13.07□□□□□ -0.32
Trim23-201ENSMUST00000022225 Atp13a4Q5XF90 1193 aa13.07□□□□□ -0.32
Trim23-201ENSMUST00000022225 Ugt1a1Q63886 535 aa13.07□□□□□ -0.32
Trim23-201ENSMUST00000022225 Chsy1Q6ZQ11 800 aa13.07□□□□□ -0.32
Trim23-201ENSMUST00000022225 Rhbdf2Q80WQ6 827 aa13.07□□□□□ -0.32
Trim23-201ENSMUST00000022225 Pgm2l1Q8CAA7 621 aa13.07□□□□□ -0.32
Trim23-201ENSMUST00000022225 Cdan1Q8CC12 1239 aa13.07□□□□□ -0.32
Trim23-201ENSMUST00000022225 Znf830Q8R1N0 363 aaKnown RBP13.07□□□□□ -0.32
Trim23-201ENSMUST00000022225 MgarpQ8VI64 283 aa13.07□□□□□ -0.32
Trim23-201ENSMUST00000022225 Zbtb1Q91VL9 713 aa13.07□□□□□ -0.32
Trim23-201ENSMUST00000022225 MmadhcQ99LS1 296 aa13.07□□□□□ -0.32
Trim23-201ENSMUST00000022225 Wars2Q9CYK1 360 aa13.07□□□□□ -0.32
Trim23-201ENSMUST00000022225 Morc1Q9WVL5 950 aa13.07□□□□□ -0.32
Trim23-201ENSMUST00000022225 Fam81bA0A140LI28 432 aa13.07□□□□□ -0.32
Retrieved 100 of 22,080 RNA–protein pairs in 22 ms