RNA–Protein interactions for RNA: ENSMUST00000016399.5

Tubb1-201, Transcript of Tubulin beta-1 chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Tubb1, Length 1,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb1-201ENSMUST00000016399 Has1Q61647 583 aa11.8□□□□□ -0.52
Tubb1-201ENSMUST00000016399 Cyth4Q80YW0 393 aa11.8□□□□□ -0.52
Tubb1-201ENSMUST00000016399 Tmem220Q8BP07 167 aa11.8□□□□□ -0.52
Tubb1-201ENSMUST00000016399 Vps52Q8C754 723 aaKnown RBP11.8□□□□□ -0.52
Tubb1-201ENSMUST00000016399 Gpc3Q8CFZ4 579 aa11.8□□□□□ -0.52
Tubb1-201ENSMUST00000016399 Rftn2Q8CHX7 500 aa11.8□□□□□ -0.52
Tubb1-201ENSMUST00000016399 Csde1Q91W50 798 aaKnown RBP11.8□□□□□ -0.52
Tubb1-201ENSMUST00000016399 PrameQ9D4Z5 464 aa11.8□□□□□ -0.52
Tubb1-201ENSMUST00000016399 Cbx6Q9DBY5 414 aa11.8□□□□□ -0.52
Tubb1-201ENSMUST00000016399 Usp29Q9ES63 869 aa11.8□□□□□ -0.52
Tubb1-201ENSMUST00000016399 Tlr5Q9JLF7 859 aa11.8□□□□□ -0.52
Tubb1-201ENSMUST00000016399 Cpsf3Q9QXK7 684 aa11.8□□□□□ -0.52
Tubb1-201ENSMUST00000016399 Olfr456B2RT27 312 aa11.79□□□□□ -0.52
Tubb1-201ENSMUST00000016399 Ankrd34aB2RW11 495 aa11.79□□□□□ -0.52
Tubb1-201ENSMUST00000016399 Gimd1E9PW74 217 aa11.79□□□□□ -0.52
Tubb1-201ENSMUST00000016399 Plekha5E9Q6H8 1269 aa11.79□□□□□ -0.52
Tubb1-201ENSMUST00000016399 Gm10801F7C7Q0 168 aa11.79□□□□□ -0.52
Tubb1-201ENSMUST00000016399 MybP06876 636 aa11.79□□□□□ -0.52
Tubb1-201ENSMUST00000016399 Itgb1P09055 798 aaKnown RBP11.79□□□□□ -0.52
Tubb1-201ENSMUST00000016399 Pla2g4aP47713 748 aa11.79□□□□□ -0.52
Tubb1-201ENSMUST00000016399 Scarf2P59222 833 aa11.79□□□□□ -0.52
Tubb1-201ENSMUST00000016399 Hmgb1P63158 215 aaKnown RBP11.79□□□□□ -0.52
Tubb1-201ENSMUST00000016399 Cct6aP80317 531 aaKnown RBP11.79□□□□□ -0.52
Tubb1-201ENSMUST00000016399 Edem3Q2HXL6 931 aa11.79□□□□□ -0.52
Tubb1-201ENSMUST00000016399 ItgaeQ60677 1167 aa11.79□□□□□ -0.52
Tubb1-201ENSMUST00000016399 Isy1Q69ZQ2 285 aaKnown RBP11.79□□□□□ -0.52
Tubb1-201ENSMUST00000016399 Armcx2Q6A058 784 aaKnown RBP11.79□□□□□ -0.52
Tubb1-201ENSMUST00000016399 Q8BGN9 141 aa11.79□□□□□ -0.52
Tubb1-201ENSMUST00000016399 Armcx3Q8BHS6 379 aa11.79□□□□□ -0.52
Tubb1-201ENSMUST00000016399 Tmem260Q8BMD6 703 aa11.79□□□□□ -0.52
Tubb1-201ENSMUST00000016399 Leng9Q8BTN6 485 aa11.79□□□□□ -0.52
Tubb1-201ENSMUST00000016399 Ankk1Q8BZ25 745 aa11.79□□□□□ -0.52
Tubb1-201ENSMUST00000016399 SucoQ8C341 1250 aa11.79□□□□□ -0.52
Tubb1-201ENSMUST00000016399 Bbs7Q8K2G4 715 aa11.79□□□□□ -0.52
Tubb1-201ENSMUST00000016399 Fam129bQ8R1F1 749 aa11.79□□□□□ -0.52
Tubb1-201ENSMUST00000016399 Taf6lQ8R2K4 616 aa11.79□□□□□ -0.52
Tubb1-201ENSMUST00000016399 Olfr458Q8VF80 313 aa11.79□□□□□ -0.52
Tubb1-201ENSMUST00000016399 Olfr457Q8VGP5 313 aa11.79□□□□□ -0.52
Tubb1-201ENSMUST00000016399 Txndc5Q91W90 417 aa11.79□□□□□ -0.52
Tubb1-201ENSMUST00000016399 Galnt15Q9D2N8 638 aa11.79□□□□□ -0.52
Tubb1-201ENSMUST00000016399 Cfap45Q9D9U9 551 aa11.79□□□□□ -0.52
Tubb1-201ENSMUST00000016399 Grb14Q9JLM9 538 aa11.79□□□□□ -0.52
Tubb1-201ENSMUST00000016399 Egfl7Q9QXT5 275 aa11.79□□□□□ -0.52
Tubb1-201ENSMUST00000016399 Bcl11aQ9QYE3 773 aa11.79□□□□□ -0.52
Tubb1-201ENSMUST00000016399 Peg12Q9WVA7 283 aa11.79□□□□□ -0.52
Tubb1-201ENSMUST00000016399 Bscl2Q9Z2E9 383 aa11.79□□□□□ -0.52
Tubb1-201ENSMUST00000016399 Vmn2r121A2BE32 847 aa11.78□□□□□ -0.52
Tubb1-201ENSMUST00000016399 Maml3D4QGC2 1135 aa11.78□□□□□ -0.52
Tubb1-201ENSMUST00000016399 Zfp651E9PZ11 729 aa11.78□□□□□ -0.52
Tubb1-201ENSMUST00000016399 Pla2g4bP0C871 782 aa11.78□□□□□ -0.52
Tubb1-201ENSMUST00000016399 GcP21614 476 aa11.78□□□□□ -0.52
Tubb1-201ENSMUST00000016399 PdgfbP31240 241 aa11.78□□□□□ -0.52
Tubb1-201ENSMUST00000016399 Oaz1P54369 227 aa11.78□□□□□ -0.52
Tubb1-201ENSMUST00000016399 Mark3Q03141 753 aa11.78□□□□□ -0.52
Tubb1-201ENSMUST00000016399 Zc3h18Q0P678 948 aaKnown RBP11.78□□□□□ -0.52
Tubb1-201ENSMUST00000016399 Abi3bpQ59IW6 1179 aa11.78□□□□□ -0.52
Tubb1-201ENSMUST00000016399 Dhx40Q6PE54 779 aaKnown RBP11.78□□□□□ -0.52
Tubb1-201ENSMUST00000016399 Lrfn2Q80TG9 788 aa11.78□□□□□ -0.52
Tubb1-201ENSMUST00000016399 RimklbQ80WS1 387 aa11.78□□□□□ -0.52
Tubb1-201ENSMUST00000016399 AarsQ8BGQ7 968 aa11.78□□□□□ -0.52
Tubb1-201ENSMUST00000016399 Rpp40Q8R1F9 363 aa11.78□□□□□ -0.52
Tubb1-201ENSMUST00000016399 Thap2Q9D305 217 aa11.78□□□□□ -0.52
Tubb1-201ENSMUST00000016399 Sdr42e1Q9D665 394 aa11.78□□□□□ -0.52
Tubb1-201ENSMUST00000016399 March8Q9DBD2 286 aa11.78□□□□□ -0.52
Tubb1-201ENSMUST00000016399 C1qtnf1Q9QXP7 281 aa11.78□□□□□ -0.52
Tubb1-201ENSMUST00000016399 NcdnQ9Z0E0 729 aa11.78□□□□□ -0.52
Tubb1-201ENSMUST00000016399 Col4a6B1AVK5 1691 aa11.78□□□□□ -0.52
Tubb1-201ENSMUST00000016399 Olfr663A0A1B0GSI9 319 aa11.77□□□□□ -0.52
Tubb1-201ENSMUST00000016399 Spryd3E9Q9B3 442 aa11.77□□□□□ -0.52
Tubb1-201ENSMUST00000016399 Gimap9G3X987 291 aa11.77□□□□□ -0.52
Tubb1-201ENSMUST00000016399 Rab11fip2G3XA57 512 aa11.77□□□□□ -0.52
Tubb1-201ENSMUST00000016399 Tnfrsf11aO35305 625 aa11.77□□□□□ -0.52
Tubb1-201ENSMUST00000016399 Hmx1O70218 332 aa11.77□□□□□ -0.52
Tubb1-201ENSMUST00000016399 GpiP06745 558 aaKnown RBP11.77□□□□□ -0.52
Tubb1-201ENSMUST00000016399 CcnoP0C242 352 aa11.77□□□□□ -0.52
Tubb1-201ENSMUST00000016399 Adssl1P28650 457 aa11.77□□□□□ -0.52
Tubb1-201ENSMUST00000016399 Ercc5P35689 1170 aa11.77□□□□□ -0.52
Tubb1-201ENSMUST00000016399 Ndufs6P52503 116 aa11.77□□□□□ -0.52
Tubb1-201ENSMUST00000016399 Smpd1Q04519 627 aa11.77□□□□□ -0.52
Tubb1-201ENSMUST00000016399 Ccdc162pQ0VG85 912 aa11.77□□□□□ -0.52
Tubb1-201ENSMUST00000016399 Cd163Q2VLH6 1121 aa11.77□□□□□ -0.52
Tubb1-201ENSMUST00000016399 Snx25Q3ZT31 840 aa11.77□□□□□ -0.52
Tubb1-201ENSMUST00000016399 Rpf1Q7TND5 349 aaKnown RBP11.77□□□□□ -0.52
Tubb1-201ENSMUST00000016399 Ints8Q80V86 995 aa11.77□□□□□ -0.52
Tubb1-201ENSMUST00000016399 Pym1Q8CHP5 203 aaKnown RBP11.77□□□□□ -0.52
Tubb1-201ENSMUST00000016399 Art3Q8R2G4 371 aa11.77□□□□□ -0.52
Tubb1-201ENSMUST00000016399 MiosQ8VE19 875 aa11.77□□□□□ -0.52
Tubb1-201ENSMUST00000016399 YarsQ91WQ3 528 aaKnown RBP11.77□□□□□ -0.52
Tubb1-201ENSMUST00000016399 Pcdha2Q91Y17 948 aa11.77□□□□□ -0.52
Tubb1-201ENSMUST00000016399 B4galt3Q91YY2 395 aa11.77□□□□□ -0.52
Tubb1-201ENSMUST00000016399 Asb7Q91ZU0 318 aa11.77□□□□□ -0.52
Tubb1-201ENSMUST00000016399 Mfap3Q922T2 349 aa11.77□□□□□ -0.52
Tubb1-201ENSMUST00000016399 Bbox1Q924Y0 387 aa11.77□□□□□ -0.52
Tubb1-201ENSMUST00000016399 Lpin2Q99PI5 893 aa11.77□□□□□ -0.52
Tubb1-201ENSMUST00000016399 Cfap53Q9D439 514 aa11.77□□□□□ -0.52
Tubb1-201ENSMUST00000016399 Kcnq4Q9JK97 696 aa11.77□□□□□ -0.52
Tubb1-201ENSMUST00000016399 Knop1Q9Z2Q2 478 aaKnown RBP11.77□□□□□ -0.52
Tubb1-201ENSMUST00000016399 Fam184aE9PW83 1143 aa11.77□□□□□ -0.53
Tubb1-201ENSMUST00000016399 Gm6583E9Q8Z1 469 aa11.77□□□□□ -0.53
Tubb1-201ENSMUST00000016399 Pbx3O35317 434 aa11.77□□□□□ -0.53
Retrieved 100 of 22,080 RNA–protein pairs in 28.6 ms