RNA–Protein interactions for RNA: ENSMUST00000005705.7

Trim28-201, Transcript of Transcription intermediary factor 1-beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim28, Length 3,245 nt, Biotype protein coding, Subcellular localisation Exosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28-201ENSMUST00000005705 Ccdc138Q0VF22 680 aa17.25■□□□□ 0.35
Trim28-201ENSMUST00000005705 Arhgef18Q6P9R4 1021 aa17.25■□□□□ 0.35
Trim28-201ENSMUST00000005705 2700097O09RikQ6PGK3 301 aa17.25■□□□□ 0.35
Trim28-201ENSMUST00000005705 Trpa1Q8BLA8 1125 aa17.25■□□□□ 0.35
Trim28-201ENSMUST00000005705 Serpinb13Q8CDC0 389 aa17.25■□□□□ 0.35
Trim28-201ENSMUST00000005705 Fbxl13Q8CDU4 790 aa17.25■□□□□ 0.35
Trim28-201ENSMUST00000005705 Plcg2Q8CIH5 1265 aa17.25■□□□□ 0.35
Trim28-201ENSMUST00000005705 Ugt3a2Q8JZZ0 523 aa17.25■□□□□ 0.35
Trim28-201ENSMUST00000005705 Sec14l2Q99J08 403 aa17.25■□□□□ 0.35
Trim28-201ENSMUST00000005705 AticQ9CWJ9 592 aaKnown RBP17.25■□□□□ 0.35
Trim28-201ENSMUST00000005705 Mmp15O54732 657 aa17.25■□□□□ 0.35
Trim28-201ENSMUST00000005705 Bmp2P21274 394 aa17.25■□□□□ 0.35
Trim28-201ENSMUST00000005705 Odr4Q4PJX1 447 aa17.25■□□□□ 0.35
Trim28-201ENSMUST00000005705 Tfap2bQ61313 459 aa17.25■□□□□ 0.35
Trim28-201ENSMUST00000005705 Osbpl2Q8BX94 484 aa17.25■□□□□ 0.35
Trim28-201ENSMUST00000005705 Smtnl2Q8CI12 456 aa17.25■□□□□ 0.35
Trim28-201ENSMUST00000005705 Rev1Q920Q2 1249 aa17.25■□□□□ 0.35
Trim28-201ENSMUST00000005705 Grtp1Q9D3N8 359 aa17.25■□□□□ 0.35
Trim28-201ENSMUST00000005705 Gpatch1Q9DBM1 930 aa17.25■□□□□ 0.35
Trim28-201ENSMUST00000005705 Gm15262A0A140LIQ5 728 aa17.24■□□□□ 0.35
Trim28-201ENSMUST00000005705 Osbpl7A2A716 963 aa17.24■□□□□ 0.35
Trim28-201ENSMUST00000005705 Mocs3A2BDX3 460 aaKnown RBP17.24■□□□□ 0.35
Trim28-201ENSMUST00000005705 Gm4846B2RWH8 538 aa17.24■□□□□ 0.35
Trim28-201ENSMUST00000005705 Zfp266E9Q2S7 604 aa17.24■□□□□ 0.35
Trim28-201ENSMUST00000005705 Trove2O08848 538 aa17.24■□□□□ 0.35
Trim28-201ENSMUST00000005705 Chil3O35744 398 aa17.24■□□□□ 0.35
Trim28-201ENSMUST00000005705 Prom1O54990 867 aa17.24■□□□□ 0.35
Trim28-201ENSMUST00000005705 Cops2P61202 443 aaKnown RBP17.24■□□□□ 0.35
Trim28-201ENSMUST00000005705 P4ha1Q60715 534 aa17.24■□□□□ 0.35
Trim28-201ENSMUST00000005705 Man2a2Q8BRK9 1152 aa17.24■□□□□ 0.35
Trim28-201ENSMUST00000005705 HlcsQ920N2 722 aa17.24■□□□□ 0.35
Trim28-201ENSMUST00000005705 Grk1Q9WVL4 564 aa17.24■□□□□ 0.35
Trim28-201ENSMUST00000005705 AdssP46664 456 aa17.24■□□□□ 0.35
Trim28-201ENSMUST00000005705 A1cfQ5YD48 595 aa17.24■□□□□ 0.35
Trim28-201ENSMUST00000005705 Insm1Q63ZV0 521 aa17.24■□□□□ 0.35
Trim28-201ENSMUST00000005705 Cyp3a11Q64459 504 aa17.24■□□□□ 0.35
Trim28-201ENSMUST00000005705 TbckQ8BM85 762 aa17.24■□□□□ 0.35
Trim28-201ENSMUST00000005705 Akr1c14Q91WT7 323 aa17.24■□□□□ 0.35
Trim28-201ENSMUST00000005705 Dnajc3Q91YW3 504 aa17.24■□□□□ 0.35
Trim28-201ENSMUST00000005705 NkapQ9D0F4 415 aaKnown RBP17.24■□□□□ 0.35
Trim28-201ENSMUST00000005705 Slfn8B1ARD8 910 aa17.23■□□□□ 0.35
Trim28-201ENSMUST00000005705 Pias1O88907 651 aa17.23■□□□□ 0.35
Trim28-201ENSMUST00000005705 Akr1b7P21300 316 aa17.23■□□□□ 0.35
Trim28-201ENSMUST00000005705 Churc1Q6DG52 112 aa17.23■□□□□ 0.35
Trim28-201ENSMUST00000005705 Pnma1Q8C1C8 353 aa17.23■□□□□ 0.35
Trim28-201ENSMUST00000005705 Rassf9Q8K342 435 aa17.23■□□□□ 0.35
Trim28-201ENSMUST00000005705 1700016D06RikQ9DAA5 166 aa17.23■□□□□ 0.35
Trim28-201ENSMUST00000005705 Phf2Q9WTU0 1096 aa17.23■□□□□ 0.35
Trim28-201ENSMUST00000005705 RptorQ8K4Q0 1335 aa17.23■□□□□ 0.35
Trim28-201ENSMUST00000005705 Prss51A0A286YDY8 319 aa17.23■□□□□ 0.35
Trim28-201ENSMUST00000005705 C87977A2A958 498 aa17.23■□□□□ 0.35
Trim28-201ENSMUST00000005705 AfmO89020 608 aa17.23■□□□□ 0.35
Trim28-201ENSMUST00000005705 RalaP63321 206 aa17.23■□□□□ 0.35
Trim28-201ENSMUST00000005705 Pfkfb2P70265 519 aa17.23■□□□□ 0.35
Trim28-201ENSMUST00000005705 Nrp1P97333 923 aa17.23■□□□□ 0.35
Trim28-201ENSMUST00000005705 Nsun2Q1HFZ0 757 aaKnown RBP17.23■□□□□ 0.35
Trim28-201ENSMUST00000005705 Lrig3Q6P1C6 1117 aa17.23■□□□□ 0.35
Trim28-201ENSMUST00000005705 Slc4a7Q8BTY2 1034 aa17.23■□□□□ 0.35
Trim28-201ENSMUST00000005705 Klhl11Q8CE33 709 aa17.23■□□□□ 0.35
Trim28-201ENSMUST00000005705 Bzw1Q9CQC6 419 aaKnown RBP17.23■□□□□ 0.35
Trim28-201ENSMUST00000005705 Hao1Q9WU19 370 aa17.23■□□□□ 0.35
Trim28-201ENSMUST00000005705 Zfp839E9PUU5 921 aa17.23■□□□□ 0.35
Trim28-201ENSMUST00000005705 Gm21962L7N280 338 aa17.23■□□□□ 0.35
Trim28-201ENSMUST00000005705 Atp2a2O55143 1044 aaKnown RBP17.23■□□□□ 0.35
Trim28-201ENSMUST00000005705 Stmn4P63042 189 aa17.23■□□□□ 0.35
Trim28-201ENSMUST00000005705 Syne3Q4FZC9 975 aa17.23■□□□□ 0.35
Trim28-201ENSMUST00000005705 Pde6cQ91ZQ1 861 aa17.23■□□□□ 0.35
Trim28-201ENSMUST00000005705 Q9DA42 136 aa17.23■□□□□ 0.35
Trim28-201ENSMUST00000005705 Sv2aQ9JIS5 742 aa17.23■□□□□ 0.35
Trim28-201ENSMUST00000005705 Lrrc73B2RWC4 316 aa17.22■□□□□ 0.35
Trim28-201ENSMUST00000005705 Aff1O88573 1216 aa17.22■□□□□ 0.35
Trim28-201ENSMUST00000005705 GcP21614 476 aa17.22■□□□□ 0.35
Trim28-201ENSMUST00000005705 Tff2Q03404 129 aa17.22■□□□□ 0.35
Trim28-201ENSMUST00000005705 Atp5c1Q91VR2 298 aaKnown RBP17.22■□□□□ 0.35
Trim28-201ENSMUST00000005705 TarsQ9D0R2 722 aaKnown RBP17.22■□□□□ 0.35
Trim28-201ENSMUST00000005705 Ifi202Q9R002 445 aa17.22■□□□□ 0.35
Trim28-201ENSMUST00000005705 Wdr95D3Z7A8 784 aa17.22■□□□□ 0.35
Trim28-201ENSMUST00000005705 Lgr6Q3UVD5 967 aa17.22■□□□□ 0.35
Trim28-201ENSMUST00000005705 Ddhd1Q80YA3 547 aa17.22■□□□□ 0.35
Trim28-201ENSMUST00000005705 Ubiad1Q9DC60 336 aa17.22■□□□□ 0.35
Trim28-201ENSMUST00000005705 Btaf1E9QAE3 1848 aa17.22■□□□□ 0.35
Trim28-201ENSMUST00000005705 Ambra1A2AH22 1300 aa17.21■□□□□ 0.35
Trim28-201ENSMUST00000005705 Gm42715A0A087WP63 3095 aaKnown RBP17.21■□□□□ 0.35
Trim28-201ENSMUST00000005705 Kif5aP33175 1027 aa17.21■□□□□ 0.35
Trim28-201ENSMUST00000005705 Hcls1P49710 486 aaKnown RBP17.21■□□□□ 0.35
Trim28-201ENSMUST00000005705 Wfs1P56695 890 aa17.21■□□□□ 0.35
Trim28-201ENSMUST00000005705 Tnfaip8l3Q3TBL6 204 aa17.21■□□□□ 0.35
Trim28-201ENSMUST00000005705 GmipQ6PGG2 971 aa17.21■□□□□ 0.35
Trim28-201ENSMUST00000005705 Ddx42Q810A7 929 aaKnown RBP17.21■□□□□ 0.35
Trim28-201ENSMUST00000005705 Hsf2bpQ9D4G2 338 aa17.21■□□□□ 0.35
Trim28-201ENSMUST00000005705 CitP49025 2055 aa17.21■□□□□ 0.35
Trim28-201ENSMUST00000005705 Dynlt1P51807 113 aa17.21■□□□□ 0.35
Trim28-201ENSMUST00000005705 Bpifb5Q3UQ05 490 aa17.21■□□□□ 0.35
Trim28-201ENSMUST00000005705 Znf76Q8BMU0 568 aa17.21■□□□□ 0.35
Trim28-201ENSMUST00000005705 Apol7cQ8C6E1 369 aa17.21■□□□□ 0.35
Trim28-201ENSMUST00000005705 Caskin2Q8VHK1 1201 aa17.21■□□□□ 0.35
Trim28-201ENSMUST00000005705 Rnf225Q9D7D1 332 aa17.21■□□□□ 0.35
Trim28-201ENSMUST00000005705 Ccdc97Q9DBT3 340 aa17.21■□□□□ 0.35
Trim28-201ENSMUST00000005705 Lonrf2B2RT44 518 aa17.21■□□□□ 0.34
Trim28-201ENSMUST00000005705 Rap1gds1E9Q912 607 aa17.21■□□□□ 0.34
Retrieved 100 of 22,080 RNA–protein pairs in 22.9 ms