RNA–Protein interactions for RNA: YOR035C

SHE4, Transcript of Protein containing a UCS (UNC-45/CRO1/SHE4) domain, yeastyeast

Gene SHE4, Length 2,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHE4YOR035C CAM1P29547 415 aaKnown RBP1.8□□□□□ -2.12
SHE4YOR035C SUR2P38992 349 aa1.8□□□□□ -2.12
SHE4YOR035C MND1P53102 219 aa1.8□□□□□ -2.12
SHE4YOR035C FMP41P53889 259 aaKnown RBP1.8□□□□□ -2.12
SHE4YOR035C YEL009C-AA0A023PZF2 135 aa1.79□□□□□ -2.12
SHE4YOR035C RPS3P05750 240 aaKnown RBP1.79□□□□□ -2.12
SHE4YOR035C HIS3P06633 220 aa1.79□□□□□ -2.12
SHE4YOR035C RPC40P07703 335 aaKnown RBP1.79□□□□□ -2.12
SHE4YOR035C IBA57P47158 497 aa1.79□□□□□ -2.12
SHE4YOR035C YNL095CP53932 642 aa1.79□□□□□ -2.12
SHE4YOR035C YPL039WQ03080 316 aa1.79□□□□□ -2.12
SHE4YOR035C SFH1Q06168 426 aa1.79□□□□□ -2.12
SHE4YOR035C YKL070WP36087 169 aa1.79□□□□□ -2.12
SHE4YOR035C MED6P38782 295 aa1.79□□□□□ -2.12
SHE4YOR035C PEX18P38855 283 aa1.79□□□□□ -2.12
SHE4YOR035C SIR4P11978 1358 aa1.79□□□□□ -2.12
SHE4YOR035C TDH1P00360 332 aaKnown RBP1.78□□□□□ -2.12
SHE4YOR035C RRT12P25381 491 aa1.78□□□□□ -2.12
SHE4YOR035C MRX5P47007 382 aa1.78□□□□□ -2.12
SHE4YOR035C SSU72P53538 206 aaPredicted RBP1.78□□□□□ -2.12
SHE4YOR035C RGM1Q00453 211 aa1.78□□□□□ -2.12
SHE4YOR035C VBA1Q04301 562 aa1.78□□□□□ -2.12
SHE4YOR035C SEC10Q06245 871 aa1.78□□□□□ -2.12
SHE4YOR035C PIR5P46999 287 aa1.78□□□□□ -2.12
SHE4YOR035C SPP2Q02521 185 aa1.78□□□□□ -2.12
SHE4YOR035C YOL019WQ08157 551 aa1.78□□□□□ -2.12
SHE4YOR035C PER33Q12144 273 aa1.78□□□□□ -2.12
SHE4YOR035C ISD11Q6Q560 94 aa1.78□□□□□ -2.12
SHE4YOR035C PEX3P28795 441 aa1.77□□□□□ -2.13
SHE4YOR035C ATG12P38316 186 aa1.77□□□□□ -2.13
SHE4YOR035C ARN2P38724 620 aa1.77□□□□□ -2.13
SHE4YOR035C YHI9P38765 294 aa1.77□□□□□ -2.13
SHE4YOR035C RRF1P38771 230 aa1.77□□□□□ -2.13
SHE4YOR035C OST3P48439 350 aa1.77□□□□□ -2.13
SHE4YOR035C ERV25P54837 211 aaKnown RBP1.77□□□□□ -2.13
SHE4YOR035C YOS9Q99220 542 aa1.77□□□□□ -2.13
SHE4YOR035C YAL064W-BO13512 126 aa1.77□□□□□ -2.13
SHE4YOR035C COY1P34237 679 aa1.77□□□□□ -2.13
SHE4YOR035C FMP33P46998 180 aa1.77□□□□□ -2.13
SHE4YOR035C SDC1Q03323 175 aa1.77□□□□□ -2.13
SHE4YOR035C YMR166CQ03829 368 aa1.77□□□□□ -2.13
SHE4YOR035C POF1P25576 258 aa1.76□□□□□ -2.13
SHE4YOR035C HMT1P38074 348 aa1.76□□□□□ -2.13
SHE4YOR035C TIM21P53220 239 aa1.76□□□□□ -2.13
SHE4YOR035C LSB1P53281 241 aa1.76□□□□□ -2.13
SHE4YOR035C LOA1Q06508 300 aa1.76□□□□□ -2.13
SHE4YOR035C UTP10P42945 1769 aaKnown RBP1.76□□□□□ -2.13
SHE4YOR035C BMH1P29311 267 aaKnown RBP1.76□□□□□ -2.13
SHE4YOR035C SER33P40510 469 aa1.76□□□□□ -2.13
SHE4YOR035C YJR141WP47172 347 aaPredicted RBP1.76□□□□□ -2.13
SHE4YOR035C FCF1Q05498 189 aaPredicted RBP1.76□□□□□ -2.13
SHE4YOR035C RDS3Q06835 107 aaPredicted RBP1.76□□□□□ -2.13
SHE4YOR035C TY3A-GQ12173 290 aa1.76□□□□□ -2.13
SHE4YOR035C TY3A-IQ99219 290 aa1.76□□□□□ -2.13
SHE4YOR035C CSF1Q12150 2958 aa1.75□□□□□ -2.13
SHE4YOR035C SSA3P09435 649 aaKnown RBP1.75□□□□□ -2.13
SHE4YOR035C CDC14Q00684 551 aa1.75□□□□□ -2.13
SHE4YOR035C CTR3Q06686 241 aa1.75□□□□□ -2.13
SHE4YOR035C YBL112CQ3E7Y4 105 aa1.75□□□□□ -2.13
SHE4YOR035C SSK22P25390 1331 aaPredicted RBP1.75□□□□□ -2.13
SHE4YOR035C CSG2P35206 410 aa1.74□□□□□ -2.13
SHE4YOR035C NPT1P39683 429 aaKnown RBP1.74□□□□□ -2.13
SHE4YOR035C DSK2P48510 373 aa1.74□□□□□ -2.13
SHE4YOR035C GMC2Q06201 188 aa1.74□□□□□ -2.13
SHE4YOR035C AGC1Q12482 902 aa1.74□□□□□ -2.13
SHE4YOR035C AI5_BETAQ9ZZX0 354 aa1.74□□□□□ -2.13
SHE4YOR035C MET16P18408 261 aaPredicted RBP1.74□□□□□ -2.13
SHE4YOR035C HSM3P38348 480 aa1.74□□□□□ -2.13
SHE4YOR035C EMC2P47133 292 aaKnown RBP1.74□□□□□ -2.13
SHE4YOR035C NIF3P53081 288 aa1.74□□□□□ -2.13
SHE4YOR035C RPP0P05317 312 aaKnown RBP1.73□□□□□ -2.13
SHE4YOR035C RAD10P06838 210 aa1.73□□□□□ -2.13
SHE4YOR035C SNF6P18888 332 aa1.73□□□□□ -2.13
SHE4YOR035C CTS2Q06350 511 aa1.73□□□□□ -2.13
SHE4YOR035C ARV1Q06541 321 aa1.73□□□□□ -2.13
SHE4YOR035C RPL4AP10664 362 aaKnown RBP1.73□□□□□ -2.13
SHE4YOR035C HEK2P38199 381 aaKnown RBP RIP-Chip data1.73□□□□□ -2.13not detected
SHE4YOR035C TAD2P47058 250 aa1.73□□□□□ -2.13
SHE4YOR035C RPL4BP49626 362 aaKnown RBP1.73□□□□□ -2.13
SHE4YOR035C SLX9P53251 210 aaPredicted RBP1.73□□□□□ -2.13
SHE4YOR035C MNT4P53745 580 aa1.73□□□□□ -2.13
SHE4YOR035C GRH1Q04410 372 aaKnown RBP1.73□□□□□ -2.13
SHE4YOR035C MEC1P38111 2368 aa1.72□□□□□ -2.13
SHE4YOR035C DPB2P24482 689 aaPredicted RBP1.72□□□□□ -2.13
SHE4YOR035C EBP2P36049 427 aaKnown RBP1.72□□□□□ -2.13
SHE4YOR035C COA1P40452 197 aa1.72□□□□□ -2.13
SHE4YOR035C PEX10Q05568 337 aa1.72□□□□□ -2.13
SHE4YOR035C SEC16P48415 2195 aaKnown RBP1.72□□□□□ -2.13
SHE4YOR035C SFC1P33303 322 aa1.72□□□□□ -2.13
SHE4YOR035C YHL049CP38722 271 aa1.72□□□□□ -2.13
SHE4YOR035C RCY1P39531 840 aa1.72□□□□□ -2.13
SHE4YOR035C YJL028WP47062 111 aa1.72□□□□□ -2.13
SHE4YOR035C SWS2P53937 143 aa1.72□□□□□ -2.13
SHE4YOR035C ATC1Q04005 294 aa1.72□□□□□ -2.13
SHE4YOR035C SUE1Q06524 206 aa1.72□□□□□ -2.13
SHE4YOR035C PLB3Q08108 686 aa1.72□□□□□ -2.13
SHE4YOR035C TOM40P23644 387 aaKnown RBP1.71□□□□□ -2.14
SHE4YOR035C SPT8P38915 602 aa1.71□□□□□ -2.14
SHE4YOR035C SPO77Q06134 477 aa1.71□□□□□ -2.14
SHE4YOR035C PST1Q12355 444 aa1.71□□□□□ -2.14
Retrieved 100 of 5,963 RNA–protein pairs in 38 ms