RNA–Protein interactions for RNA: YNL016W

PUB1, Transcript of Poly (A)+ RNA-binding protein, yeastyeast

Gene PUB1, Length 1,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PUB1YNL016W EDC3P39998 551 aaKnown RBP3.41□□□□□ -1.86
PUB1YNL016W YER189WP40104 122 aa3.41□□□□□ -1.86
PUB1YNL016W VRG4P40107 337 aa3.41□□□□□ -1.86
PUB1YNL016W YIL169CP40442 995 aa3.41□□□□□ -1.86
PUB1YNL016W PAN6P40459 309 aa3.41□□□□□ -1.86
PUB1YNL016W RRT5P43607 289 aa3.41□□□□□ -1.86
PUB1YNL016W NUP57P48837 541 aa3.41□□□□□ -1.86
PUB1YNL016W ALG13P53178 202 aa3.41□□□□□ -1.86
PUB1YNL016W JAC1P53193 184 aa3.41□□□□□ -1.86
PUB1YNL016W PRP38Q00723 242 aaPredicted RBP3.41□□□□□ -1.86
PUB1YNL016W TPO3Q06451 622 aa3.41□□□□□ -1.86
PUB1YNL016W TAZ1Q06510 381 aa3.41□□□□□ -1.86
PUB1YNL016W YNG1Q08465 219 aa3.41□□□□□ -1.86
PUB1YNL016W ESA1Q08649 445 aa3.41□□□□□ -1.86
PUB1YNL016W BSC1Q12140 328 aa3.41□□□□□ -1.86
PUB1YNL016W RRP42Q12277 265 aaPredicted RBP3.41□□□□□ -1.86
PUB1YNL016W RPL22AP05749 121 aaKnown RBP3.4□□□□□ -1.86
PUB1YNL016W RPS3P05750 240 aaKnown RBP3.4□□□□□ -1.86
PUB1YNL016W PUT1P09368 476 aa3.4□□□□□ -1.86
PUB1YNL016W RPL20AP0CX23 172 aaKnown RBP3.4□□□□□ -1.86
PUB1YNL016W RPL20BP0CX24 172 aaPredicted RBP3.4□□□□□ -1.86
PUB1YNL016W PPH21P23594 369 aa3.4□□□□□ -1.86
PUB1YNL016W PHA2P32452 334 aa3.4□□□□□ -1.86
PUB1YNL016W GLC7P32598 312 aaKnown RBP3.4□□□□□ -1.86
PUB1YNL016W CFD1P40558 293 aa3.4□□□□□ -1.86
PUB1YNL016W PEX31P53203 462 aa3.4□□□□□ -1.86
PUB1YNL016W YLR152CP54072 576 aa3.4□□□□□ -1.86
PUB1YNL016W SNO1Q03144 224 aa3.4□□□□□ -1.86
PUB1YNL016W VHS1Q03785 461 aa3.4□□□□□ -1.86
PUB1YNL016W ECM11Q04110 302 aa3.4□□□□□ -1.86
PUB1YNL016W MUM3Q08750 479 aa3.4□□□□□ -1.86
PUB1YNL016W YPL199CQ08954 240 aa3.4□□□□□ -1.86
PUB1YNL016W RIO1Q12196 484 aaKnown RBP3.4□□□□□ -1.86
PUB1YNL016W SNU23Q12368 194 aaPredicted RBP3.4□□□□□ -1.86
PUB1YNL016W PRM4Q12498 284 aa3.4□□□□□ -1.86
PUB1YNL016W YKR104WP0CE69 306 aa3.39□□□□□ -1.87
PUB1YNL016W CBS2P14905 389 aa3.39□□□□□ -1.87
PUB1YNL016W SEN2P16658 377 aa3.39□□□□□ -1.87
PUB1YNL016W GIT1P25346 518 aa3.39□□□□□ -1.87
PUB1YNL016W JEN1P36035 616 aa3.39□□□□□ -1.87
PUB1YNL016W CAF4P36130 643 aa3.39□□□□□ -1.87
PUB1YNL016W YCR087C-AP37263 153 aa3.39□□□□□ -1.87
PUB1YNL016W DER1P38307 211 aa3.39□□□□□ -1.87
PUB1YNL016W COG3P40094 801 aa3.39□□□□□ -1.87
PUB1YNL016W JLP2P40206 208 aa3.39□□□□□ -1.87
PUB1YNL016W ICE2P40499 491 aa3.39□□□□□ -1.87
PUB1YNL016W DFG10P40526 253 aa3.39□□□□□ -1.87
PUB1YNL016W SNM1P40993 198 aa3.39□□□□□ -1.87
PUB1YNL016W IRC18P47056 224 aa3.39□□□□□ -1.87
PUB1YNL016W OST3P48439 350 aa3.39□□□□□ -1.87
PUB1YNL016W AVT4P50944 713 aa3.39□□□□□ -1.87
PUB1YNL016W TPN1P53099 579 aa3.39□□□□□ -1.87
PUB1YNL016W MMS2P53152 137 aa3.39□□□□□ -1.87
PUB1YNL016W POP6P53218 158 aa3.39□□□□□ -1.87
PUB1YNL016W GOR1P53839 350 aa3.39□□□□□ -1.87
PUB1YNL016W YMR181CQ03231 154 aa3.39□□□□□ -1.87
PUB1YNL016W YPR114WQ06107 315 aa3.39□□□□□ -1.87
PUB1YNL016W NSL1Q12143 216 aa3.39□□□□□ -1.87
PUB1YNL016W ICT1Q12385 394 aa3.39□□□□□ -1.87
PUB1YNL016W FOL3Q12676 427 aaPredicted RBP3.39□□□□□ -1.87
PUB1YNL016W PET494P07390 489 aaPredicted RBP3.38□□□□□ -1.87
PUB1YNL016W TUB1P09733 447 aaKnown RBP3.38□□□□□ -1.87
PUB1YNL016W GCY1P14065 312 aaKnown RBP RIP-Chip data3.38□□□□□ -1.87not detected
PUB1YNL016W CTA1P15202 515 aa3.38□□□□□ -1.87
PUB1YNL016W YAP1P19880 650 aaKnown RBP3.38□□□□□ -1.87
PUB1YNL016W SEC1P30619 724 aaKnown RBP3.38□□□□□ -1.87
PUB1YNL016W PMT2P31382 759 aa3.38□□□□□ -1.87
PUB1YNL016W AVT5P38176 459 aa3.38□□□□□ -1.87
PUB1YNL016W YBR137WP38276 179 aa3.38□□□□□ -1.87
PUB1YNL016W GIM4P40005 111 aaKnown RBP3.38□□□□□ -1.87
PUB1YNL016W SOK1P40317 901 aa3.38□□□□□ -1.87
PUB1YNL016W AGE2P40529 298 aa3.38□□□□□ -1.87
PUB1YNL016W YNL320WP42840 284 aa3.38□□□□□ -1.87
PUB1YNL016W YPS5P53057 165 aa3.38□□□□□ -1.87
PUB1YNL016W YNL234WP53857 426 aa3.38□□□□□ -1.87
PUB1YNL016W ELP3Q02908 557 aaKnown RBP3.38□□□□□ -1.87
PUB1YNL016W GRX8Q05926 109 aa3.38□□□□□ -1.87
PUB1YNL016W YPR098CQ06089 161 aa3.38□□□□□ -1.87
PUB1YNL016W YLR446WQ06204 433 aa3.38□□□□□ -1.87
PUB1YNL016W YLR112WQ12130 139 aa3.38□□□□□ -1.87
PUB1YNL016W YDR018CQ12185 396 aa3.38□□□□□ -1.87
PUB1YNL016W YCR024C-BQ3E7Z8 88 aa3.38□□□□□ -1.87
PUB1YNL016W PET20Q99373 253 aa3.38□□□□□ -1.87
PUB1YNL016W BI3Q9ZZW7 517 aa3.38□□□□□ -1.87
PUB1YNL016W SPS100P13130 326 aa3.38□□□□□ -1.87
PUB1YNL016W CPT1P17898 393 aa3.38□□□□□ -1.87
PUB1YNL016W PHO80P20052 293 aa3.38□□□□□ -1.87
PUB1YNL016W LDB16P25587 256 aa3.38□□□□□ -1.87
PUB1YNL016W TPS2P31688 896 aaKnown RBP3.38□□□□□ -1.87
PUB1YNL016W ANR2P36090 516 aaPredicted RBP3.38□□□□□ -1.87
PUB1YNL016W GRE3P38715 327 aaKnown RBP RIP-Chip data3.38□□□□□ -1.87not detected
PUB1YNL016W GAT1P43574 510 aa3.38□□□□□ -1.87
PUB1YNL016W YGL260WP53056 76 aa3.38□□□□□ -1.87
PUB1YNL016W BRR6P53062 197 aa3.38□□□□□ -1.87
PUB1YNL016W MSO1P53604 210 aaKnown RBP3.38□□□□□ -1.87
PUB1YNL016W IBD2P53892 351 aa3.38□□□□□ -1.87
PUB1YNL016W NRK1P53915 240 aa3.38□□□□□ -1.87
PUB1YNL016W NUP49Q02199 472 aa3.38□□□□□ -1.87
PUB1YNL016W DPP1Q05521 289 aa3.38□□□□□ -1.87
PUB1YNL016W RIF2Q06208 395 aa3.38□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 15.4 ms