RNA–Protein interactions for RNA: YKL042W

SPC42, Transcript of Central plaque component of spindle pole body (SPB), yeastyeast

Gene SPC42, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPC42YKL042W RIB1P38066 345 aa3.85□□□□□ -1.79
SPC42YKL042W MAL32P38158 584 aa3.85□□□□□ -1.79
SPC42YKL042W YHB1P39676 399 aaKnown RBP3.85□□□□□ -1.79
SPC42YKL042W YRB1P41920 201 aaKnown RBP3.85□□□□□ -1.79
SPC42YKL042W ECO1P43605 281 aa3.85□□□□□ -1.79
SPC42YKL042W YFR045WP43617 309 aa3.85□□□□□ -1.79
SPC42YKL042W YJL028WP47062 111 aa3.85□□□□□ -1.79
SPC42YKL042W MRH4P53166 561 aa3.85□□□□□ -1.79
SPC42YKL042W CGR1P53188 120 aa3.85□□□□□ -1.79
SPC42YKL042W MAL12P53341 584 aa3.85□□□□□ -1.79
SPC42YKL042W GOT1Q03554 138 aa3.85□□□□□ -1.79
SPC42YKL042W YPR063CQ12160 140 aa3.85□□□□□ -1.79
SPC42YKL042W YMR31P19955 123 aa3.84□□□□□ -1.79
SPC42YKL042W DPB2P24482 689 aaPredicted RBP3.84□□□□□ -1.79
SPC42YKL042W SSH1P38353 490 aaKnown RBP3.84□□□□□ -1.79
SPC42YKL042W RTC3P38804 111 aaPredicted RBP3.84□□□□□ -1.79
SPC42YKL042W YIL059CP40520 121 aa3.84□□□□□ -1.79
SPC42YKL042W ALG9P53868 555 aaKnown RBP3.84□□□□□ -1.79
SPC42YKL042W SYC1Q08553 188 aaPredicted RBP3.84□□□□□ -1.79
SPC42YKL042W CDC36P06100 191 aaPredicted RBP3.83□□□□□ -1.8
SPC42YKL042W CDC10P25342 322 aaKnown RBP3.83□□□□□ -1.8
SPC42YKL042W CAB3P36076 571 aa3.83□□□□□ -1.8
SPC42YKL042W EMI1Q04406 187 aa3.83□□□□□ -1.8
SPC42YKL042W SEI1Q06058 285 aa3.83□□□□□ -1.8
SPC42YKL042W IES4Q08561 116 aa3.83□□□□□ -1.8
SPC42YKL042W YPR011CQ12251 326 aa3.83□□□□□ -1.8
SPC42YKL042W TIM22Q12328 207 aa3.83□□□□□ -1.8
SPC42YKL042W NCB2Q92317 146 aa3.83□□□□□ -1.8
SPC42YKL042W CDC33P07260 213 aaKnown RBP3.82□□□□□ -1.8
SPC42YKL042W YBR121C-AP0C5L4 52 aa3.82□□□□□ -1.8
SPC42YKL042W STE18P18852 110 aa3.82□□□□□ -1.8
SPC42YKL042W SFC1P33303 322 aa3.82□□□□□ -1.8
SPC42YKL042W GDH2P33327 1092 aaKnown RBP3.82□□□□□ -1.8
SPC42YKL042W PRP18P33411 251 aaPredicted RBP3.82□□□□□ -1.8
SPC42YKL042W CBT1P36038 271 aaPredicted RBP3.82□□□□□ -1.8
SPC42YKL042W URA8P38627 578 aaPredicted RBP3.82□□□□□ -1.8
SPC42YKL042W SIP3P38717 1229 aa3.82□□□□□ -1.8
SPC42YKL042W TEM1P38987 245 aa3.82□□□□□ -1.8
SPC42YKL042W ERG28P40030 148 aa3.82□□□□□ -1.8
SPC42YKL042W PRE6P40303 254 aaKnown RBP3.82□□□□□ -1.8
SPC42YKL042W OST3P48439 350 aa3.82□□□□□ -1.8
SPC42YKL042W MIG2P53035 382 aa3.82□□□□□ -1.8
SPC42YKL042W YGL034CP53186 121 aa3.82□□□□□ -1.8
SPC42YKL042W SLD7Q08457 257 aa3.82□□□□□ -1.8
SPC42YKL042W SMT3Q12306 101 aaKnown RBP3.82□□□□□ -1.8
SPC42YKL042W YKL183C-AQ3E765 70 aa3.82□□□□□ -1.8
SPC42YKL042W SSO1P32867 290 aa3.81□□□□□ -1.8
SPC42YKL042W TKL2P33315 681 aa3.81□□□□□ -1.8
SPC42YKL042W NTF2P33331 125 aaKnown RBP3.81□□□□□ -1.8
SPC42YKL042W YMR144WP40214 342 aaKnown RBP3.81□□□□□ -1.8
SPC42YKL042W TRM9P49957 279 aa3.81□□□□□ -1.8
SPC42YKL042W CDC123Q05791 360 aa3.81□□□□□ -1.8
SPC42YKL042W YOR186WQ08560 144 aa3.81□□□□□ -1.8
SPC42YKL042W PST1Q12355 444 aa3.81□□□□□ -1.8
SPC42YKL042W ZWF1P11412 505 aaKnown RBP3.8□□□□□ -1.8
SPC42YKL042W ECM13P38195 257 aa3.8□□□□□ -1.8
SPC42YKL042W RAD17P48581 401 aa3.8□□□□□ -1.8
SPC42YKL042W YDL012CQ12489 107 aa3.8□□□□□ -1.8
SPC42YKL042W YPL247CQ12523 523 aa3.8□□□□□ -1.8
SPC42YKL042W SWI1P09547 1314 aa3.79□□□□□ -1.8
SPC42YKL042W BCY1P07278 416 aaKnown RBP3.79□□□□□ -1.8
SPC42YKL042W ECM14P38836 430 aa3.79□□□□□ -1.8
SPC42YKL042W YNL194CP40169 301 aa3.79□□□□□ -1.8
SPC42YKL042W BUD13P46947 266 aaPredicted RBP3.79□□□□□ -1.8
SPC42YKL042W MIC26P50087 233 aa3.79□□□□□ -1.8
SPC42YKL042W YNL046WP53956 172 aa3.79□□□□□ -1.8
SPC42YKL042W MRX4Q12467 430 aa3.79□□□□□ -1.8
SPC42YKL042W SIR4P11978 1358 aa3.78□□□□□ -1.8
SPC42YKL042W RPS23AP0CX29 145 aaKnown RBP3.78□□□□□ -1.8
SPC42YKL042W RPS23BP0CX30 145 aa3.78□□□□□ -1.8
SPC42YKL042W SNA3P14359 133 aa3.78□□□□□ -1.8
SPC42YKL042W RNP1P32385 249 aa3.78□□□□□ -1.8
SPC42YKL042W PRY2P36110 329 aa3.78□□□□□ -1.8
SPC42YKL042W MCM22P47167 239 aa3.78□□□□□ -1.8
SPC42YKL042W NSA1P53136 463 aaPredicted RBP3.78□□□□□ -1.8
SPC42YKL042W YMR114CQ04471 368 aaKnown RBP3.78□□□□□ -1.8
SPC42YKL042W YLR179CQ06252 201 aaKnown RBP3.78□□□□□ -1.8
SPC42YKL042W TOM40P23644 387 aaKnown RBP3.77□□□□□ -1.81
SPC42YKL042W MDM34P53083 459 aa3.77□□□□□ -1.81
SPC42YKL042W HEM25Q07534 307 aa3.77□□□□□ -1.81
SPC42YKL042W CCH1P50077 2039 aa3.77□□□□□ -1.81
SPC42YKL042W RPL28P02406 149 aaKnown RBP3.76□□□□□ -1.81
SPC42YKL042W SPT3P06844 337 aa3.76□□□□□ -1.81
SPC42YKL042W ERD2P18414 219 aa3.76□□□□□ -1.81
SPC42YKL042W SEC22P22214 214 aa3.76□□□□□ -1.81
SPC42YKL042W PPH21P23594 369 aa3.76□□□□□ -1.81
SPC42YKL042W AGA2P32781 87 aa3.76□□□□□ -1.81
SPC42YKL042W FMT1P32785 401 aa3.76□□□□□ -1.81
SPC42YKL042W YJR149WP47177 404 aa3.76□□□□□ -1.81
SPC42YKL042W CWC23P52868 283 aaPredicted RBP3.76□□□□□ -1.81
SPC42YKL042W MRPS17Q03246 237 aaPredicted RBP3.76□□□□□ -1.81
SPC42YKL042W YDR114CQ04597 100 aa3.76□□□□□ -1.81
SPC42YKL042W FCF1Q05498 189 aaPredicted RBP3.76□□□□□ -1.81
SPC42YKL042W SSQ1Q05931 657 aaPredicted RBP3.76□□□□□ -1.81
SPC42YKL042W DCN1Q12395 269 aa3.76□□□□□ -1.81
SPC42YKL042W YER189WP40104 122 aa3.75□□□□□ -1.81
SPC42YKL042W PFS2P42841 465 aaKnown RBP3.75□□□□□ -1.81
SPC42YKL042W ALG13P53178 202 aa3.75□□□□□ -1.81
SPC42YKL042W YPR195CQ06594 109 aa3.75□□□□□ -1.81
SPC42YKL042W JLP1Q12358 412 aa3.75□□□□□ -1.81
Retrieved 100 of 5,963 RNA–protein pairs in 32.8 ms