RNA–Protein interactions for RNA: YIL148W

RPL40A, Transcript of Ubiquitin-ribosomal 60S subunit protein L40A fusion protein, yeastyeast

Gene RPL40A, Length 387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPL40AYIL148W SPO73P40031 143 aa1.58□□□□□ -2.16
RPL40AYIL148W GLG2P47011 380 aa1.58□□□□□ -2.16
RPL40AYIL148W YJR079WP47126 109 aa1.58□□□□□ -2.16
RPL40AYIL148W ILM1P47155 203 aa1.58□□□□□ -2.16
RPL40AYIL148W OST3P48439 350 aa1.58□□□□□ -2.16
RPL40AYIL148W SNZ2P53824 298 aa1.58□□□□□ -2.16
RPL40AYIL148W MYO5Q04439 1219 aaKnown RBP1.58□□□□□ -2.16
RPL40AYIL148W CDD1Q06549 142 aa1.58□□□□□ -2.16
RPL40AYIL148W FEX1Q08913 375 aa1.58□□□□□ -2.16
RPL40AYIL148W FEX2Q08991 375 aa1.58□□□□□ -2.16
RPL40AYIL148W YBL112CQ3E7Y4 105 aa1.58□□□□□ -2.16
RPL40AYIL148W IPP1P00817 287 aaKnown RBP1.57□□□□□ -2.16
RPL40AYIL148W TCP1P12612 559 aaKnown RBP1.57□□□□□ -2.16
RPL40AYIL148W KRE1P17260 313 aa1.57□□□□□ -2.16
RPL40AYIL148W SSO1P32867 290 aa1.57□□□□□ -2.16
RPL40AYIL148W GOS1P38736 223 aa1.57□□□□□ -2.16
RPL40AYIL148W YER085CP40058 173 aa1.57□□□□□ -2.16
RPL40AYIL148W YER188WP40103 239 aa1.57□□□□□ -2.16
RPL40AYIL148W MRH4P53166 561 aa1.57□□□□□ -2.16
RPL40AYIL148W DIA1P54005 336 aa1.57□□□□□ -2.16
RPL40AYIL148W EMI1Q04406 187 aa1.57□□□□□ -2.16
RPL40AYIL148W GRH1Q04410 372 aaKnown RBP1.57□□□□□ -2.16
RPL40AYIL148W YMR114CQ04471 368 aaKnown RBP1.57□□□□□ -2.16
RPL40AYIL148W YLR283WQ05867 314 aa1.57□□□□□ -2.16
RPL40AYIL148W SPO77Q06134 477 aa1.57□□□□□ -2.16
RPL40AYIL148W COQ10Q08058 207 aa1.57□□□□□ -2.16
RPL40AYIL148W BBP1Q12365 385 aa1.57□□□□□ -2.16
RPL40AYIL148W GEP5Q12393 293 aa1.57□□□□□ -2.16
RPL40AYIL148W DRS2P39524 1355 aa1.57□□□□□ -2.16
RPL40AYIL148W TDH2P00358 332 aaKnown RBP1.56□□□□□ -2.16
RPL40AYIL148W ADH3P07246 375 aaKnown RBP1.56□□□□□ -2.16
RPL40AYIL148W SEC22P22214 214 aa1.56□□□□□ -2.16
RPL40AYIL148W NTG1P31378 399 aa1.56□□□□□ -2.16
RPL40AYIL148W UTR5P32630 166 aa1.56□□□□□ -2.16
RPL40AYIL148W RCN1P36054 211 aa1.56□□□□□ -2.16
RPL40AYIL148W COS8P38723 381 aa1.56□□□□□ -2.16
RPL40AYIL148W RTR1P40084 226 aaPredicted RBP1.56□□□□□ -2.16
RPL40AYIL148W YER189WP40104 122 aa1.56□□□□□ -2.16
RPL40AYIL148W YML108WQ03759 105 aa1.56□□□□□ -2.16
RPL40AYIL148W YLR179CQ06252 201 aaKnown RBP1.56□□□□□ -2.16
RPL40AYIL148W YLR126CQ12288 251 aa1.56□□□□□ -2.16
RPL40AYIL148W YPL247CQ12523 523 aa1.56□□□□□ -2.16
RPL40AYIL148W COS2P0CX12 379 aa1.55□□□□□ -2.16
RPL40AYIL148W COS3P0CX13 379 aa1.55□□□□□ -2.16
RPL40AYIL148W MATALPHA1P0CY06 175 aa1.55□□□□□ -2.16
RPL40AYIL148W HMLALPHA1P0CY07 175 aa1.55□□□□□ -2.16
RPL40AYIL148W TOM40P23644 387 aaKnown RBP1.55□□□□□ -2.16
RPL40AYIL148W VMA6P32366 345 aaKnown RBP1.55□□□□□ -2.16
RPL40AYIL148W GDH2P33327 1092 aaKnown RBP1.55□□□□□ -2.16
RPL40AYIL148W ECM13P38195 257 aa1.55□□□□□ -2.16
RPL40AYIL148W PRE6P40303 254 aaKnown RBP1.55□□□□□ -2.16
RPL40AYIL148W GON7P46984 123 aa1.55□□□□□ -2.16
RPL40AYIL148W HOC1P47124 396 aa1.55□□□□□ -2.16
RPL40AYIL148W JHD2P47156 728 aaPredicted RBP1.55□□□□□ -2.16
RPL40AYIL148W DSK2P48510 373 aa1.55□□□□□ -2.16
RPL40AYIL148W RMR1P53060 241 aa1.55□□□□□ -2.16
RPL40AYIL148W MDM34P53083 459 aa1.55□□□□□ -2.16
RPL40AYIL148W NSA1P53136 463 aaPredicted RBP1.55□□□□□ -2.16
RPL40AYIL148W RNH1Q04740 348 aa1.55□□□□□ -2.16
RPL40AYIL148W FCF1Q05498 189 aaPredicted RBP1.55□□□□□ -2.16
RPL40AYIL148W SSQ1Q05931 657 aaPredicted RBP1.55□□□□□ -2.16
RPL40AYIL148W SUE1Q06524 206 aa1.55□□□□□ -2.16
RPL40AYIL148W HEM25Q07534 307 aa1.55□□□□□ -2.16
RPL40AYIL148W CLP1Q08685 445 aaPredicted RBP1.55□□□□□ -2.16
RPL40AYIL148W YPL257WQ08974 193 aa1.55□□□□□ -2.16
RPL40AYIL148W SAS5Q99314 248 aa1.55□□□□□ -2.16
RPL40AYIL148W YLR462WO13556 202 aa1.54□□□□□ -2.16
RPL40AYIL148W NHP6BP11633 99 aaKnown RBP1.54□□□□□ -2.16
RPL40AYIL148W CDC10P25342 322 aaKnown RBP1.54□□□□□ -2.16
RPL40AYIL148W VPS21P36017 210 aaKnown RBP1.54□□□□□ -2.16
RPL40AYIL148W YEL075CP39972 122 aa1.54□□□□□ -2.16
RPL40AYIL148W YER084WP40057 128 aa1.54□□□□□ -2.16
RPL40AYIL148W GCN20P43535 752 aaKnown RBP1.54□□□□□ -2.16
RPL40AYIL148W OST2P46964 130 aa1.54□□□□□ -2.16
RPL40AYIL148W PIR5P46999 287 aa1.54□□□□□ -2.16
RPL40AYIL148W SSU72P53538 206 aaPredicted RBP1.54□□□□□ -2.16
RPL40AYIL148W NOP13P53883 403 aaKnown RBP RIP-Chip data1.54□□□□□ -2.16not detected
RPL40AYIL148W CTF19Q02732 369 aa1.54□□□□□ -2.16
RPL40AYIL148W MIX17Q03667 156 aa1.54□□□□□ -2.16
RPL40AYIL148W FAR8Q05040 523 aa1.54□□□□□ -2.16
RPL40AYIL148W RDS3Q06835 107 aaPredicted RBP1.54□□□□□ -2.16
RPL40AYIL148W HRT1Q08273 121 aa1.54□□□□□ -2.16
RPL40AYIL148W YOR186WQ08560 144 aa1.54□□□□□ -2.16
RPL40AYIL148W AGC1Q12482 902 aa1.54□□□□□ -2.16
RPL40AYIL148W HTL1Q9URQ5 78 aa1.54□□□□□ -2.16
RPL40AYIL148W SWI1P09547 1314 aa1.54□□□□□ -2.16
RPL40AYIL148W PPH21P23594 369 aa1.53□□□□□ -2.16
RPL40AYIL148W YCR102CP25608 368 aa1.53□□□□□ -2.16
RPL40AYIL148W ERG24P32462 438 aaKnown RBP1.53□□□□□ -2.16
RPL40AYIL148W VMA11P32842 164 aa1.53□□□□□ -2.16
RPL40AYIL148W SDH4P37298 181 aa1.53□□□□□ -2.16
RPL40AYIL148W YBR096WP38256 230 aa1.53□□□□□ -2.16
RPL40AYIL148W MIC12P38341 106 aa1.53□□□□□ -2.16
RPL40AYIL148W FIS1P40515 155 aa1.53□□□□□ -2.16
RPL40AYIL148W ARC15P40518 154 aaRIP-Chip data1.53□□□□□ -2.16not detected
RPL40AYIL148W YJL016WP47072 561 aa1.53□□□□□ -2.16
RPL40AYIL148W HAM1P47119 197 aaKnown RBP1.53□□□□□ -2.16
RPL40AYIL148W YGR026WP53217 278 aa1.53□□□□□ -2.16
RPL40AYIL148W CWC21Q03375 135 aaKnown RBP1.53□□□□□ -2.16
RPL40AYIL148W YMD8Q03697 442 aa1.53□□□□□ -2.16
Retrieved 100 of 5,963 RNA–protein pairs in 179.1 ms