RNA–Protein interactions for RNA: YHR040W

BCD1, Essential protein required for the accumulation of box C/D snoRNA, yeastyeast

Gene BCD1, Length 1,101 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BCD1YHR040W YLR283WQ05867 314 aa3.1□□□□□ -1.91
BCD1YHR040W BNA5Q05979 453 aa3.1□□□□□ -1.91
BCD1YHR040W MRPL51Q06090 140 aaPredicted RBP3.1□□□□□ -1.91
BCD1YHR040W PEX30Q06169 523 aa3.1□□□□□ -1.91
BCD1YHR040W TPO3Q06451 622 aa3.1□□□□□ -1.91
BCD1YHR040W YNG1Q08465 219 aa3.1□□□□□ -1.91
BCD1YHR040W YLR099W-AQ3E798 87 aa3.1□□□□□ -1.91
BCD1YHR040W VPS63O13549 108 aa3.09□□□□□ -1.91
BCD1YHR040W SPS2P08459 502 aa3.09□□□□□ -1.91
BCD1YHR040W ERD2P18414 219 aa3.09□□□□□ -1.91
BCD1YHR040W AIM17P23180 465 aaKnown RBP3.09□□□□□ -1.91
BCD1YHR040W PUT3P25502 979 aaPredicted RBP3.09□□□□□ -1.91
BCD1YHR040W TIM12P32830 109 aa3.09□□□□□ -1.91
BCD1YHR040W TAF14P35189 244 aa3.09□□□□□ -1.91
BCD1YHR040W SFK1P35735 353 aa3.09□□□□□ -1.91
BCD1YHR040W ANR2P36090 516 aaPredicted RBP3.09□□□□□ -1.91
BCD1YHR040W UTP30P36144 274 aaKnown RBP3.09□□□□□ -1.91
BCD1YHR040W NAT2P37293 288 aa3.09□□□□□ -1.91
BCD1YHR040W RTC2P38279 296 aa3.09□□□□□ -1.91
BCD1YHR040W ECM34P38728 170 aa3.09□□□□□ -1.91
BCD1YHR040W YHR210CP38893 341 aa3.09□□□□□ -1.91
BCD1YHR040W LSM1P47017 172 aaKnown RBP3.09□□□□□ -1.91
BCD1YHR040W YJR141WP47172 347 aaPredicted RBP3.09□□□□□ -1.91
BCD1YHR040W DIE2P50076 525 aa3.09□□□□□ -1.91
BCD1YHR040W SYF2P53277 215 aaPredicted RBP3.09□□□□□ -1.91
BCD1YHR040W ERV29P53337 310 aa3.09□□□□□ -1.91
BCD1YHR040W HXT11P54862 567 aa3.09□□□□□ -1.91
BCD1YHR040W CTL1Q03220 320 aaKnown RBP3.09□□□□□ -1.91
BCD1YHR040W PLP1Q04004 230 aa3.09□□□□□ -1.91
BCD1YHR040W DCR2Q05924 578 aa3.09□□□□□ -1.91
BCD1YHR040W COQ10Q08058 207 aa3.09□□□□□ -1.91
BCD1YHR040W FEX1Q08913 375 aa3.09□□□□□ -1.91
BCD1YHR040W YDL109CQ12103 647 aa3.09□□□□□ -1.91
BCD1YHR040W PSF1Q12488 208 aa3.09□□□□□ -1.91
BCD1YHR040W SET6Q12529 373 aa3.09□□□□□ -1.91
BCD1YHR040W HTZ1Q12692 134 aaKnown RBP3.09□□□□□ -1.91
BCD1YHR040W IRA1P18963 3092 aa3.08□□□□□ -1.92
BCD1YHR040W SCEIP03882 235 aa3.08□□□□□ -1.92
BCD1YHR040W MSW1P04803 379 aa3.08□□□□□ -1.92
BCD1YHR040W HIS3P06633 220 aa3.08□□□□□ -1.92
BCD1YHR040W MRP2P10663 115 aaPredicted RBP3.08□□□□□ -1.92
BCD1YHR040W ERD1P16151 362 aa3.08□□□□□ -1.92
BCD1YHR040W SEN2P16658 377 aa3.08□□□□□ -1.92
BCD1YHR040W HNM1P19807 563 aa3.08□□□□□ -1.92
BCD1YHR040W YEF1P32622 495 aa3.08□□□□□ -1.92
BCD1YHR040W MTR2P34232 184 aaKnown RBP3.08□□□□□ -1.92
BCD1YHR040W SRP102P36057 244 aaPredicted RBP3.08□□□□□ -1.92
BCD1YHR040W MAL32P38158 584 aa3.08□□□□□ -1.92
BCD1YHR040W MBB1P39534 108 aa3.08□□□□□ -1.92
BCD1YHR040W VRG4P40107 337 aa3.08□□□□□ -1.92
BCD1YHR040W RFC4P40339 323 aaKnown RBP3.08□□□□□ -1.92
BCD1YHR040W SYS1P41544 203 aa3.08□□□□□ -1.92
BCD1YHR040W QRI1P43123 477 aaKnown RBP3.08□□□□□ -1.92
BCD1YHR040W YGL204CP53089 101 aa3.08□□□□□ -1.92
BCD1YHR040W YIP5P53108 310 aa3.08□□□□□ -1.92
BCD1YHR040W YGR126WP53274 230 aa3.08□□□□□ -1.92
BCD1YHR040W MAL12P53341 584 aa3.08□□□□□ -1.92
BCD1YHR040W YNR062CP53748 327 aa3.08□□□□□ -1.92
BCD1YHR040W APM1Q00776 475 aaPredicted RBP3.08□□□□□ -1.92
BCD1YHR040W NCE101Q02820 53 aa3.08□□□□□ -1.92
BCD1YHR040W EKI1Q03764 534 aa3.08□□□□□ -1.92
BCD1YHR040W POS5Q06892 414 aa3.08□□□□□ -1.92
BCD1YHR040W MDM32Q12171 622 aa3.08□□□□□ -1.92
BCD1YHR040W ACC1Q00955 2233 aaKnown RBP3.08□□□□□ -1.92
BCD1YHR040W IRA2P19158 3079 aa3.08□□□□□ -1.92
BCD1YHR040W UBR1P19812 1950 aa3.07□□□□□ -1.92
BCD1YHR040W TDH1P00360 332 aaKnown RBP3.07□□□□□ -1.92
BCD1YHR040W RAD52P06778 471 aaKnown RBP3.07□□□□□ -1.92
BCD1YHR040W YSF3P0C074 85 aaPredicted RBP3.07□□□□□ -1.92
BCD1YHR040W DSF1P0CX08 502 aa3.07□□□□□ -1.92
BCD1YHR040W YNR073CP0CX09 502 aa3.07□□□□□ -1.92
BCD1YHR040W RPS18AP0CX55 146 aaKnown RBP3.07□□□□□ -1.92
BCD1YHR040W RPS18BP0CX56 146 aaPredicted RBP3.07□□□□□ -1.92
BCD1YHR040W NHP6BP11633 99 aaKnown RBP3.07□□□□□ -1.92
BCD1YHR040W SAG1P20840 650 aa3.07□□□□□ -1.92
BCD1YHR040W YCR100CP25606 316 aa3.07□□□□□ -1.92
BCD1YHR040W NAM9P27929 486 aa3.07□□□□□ -1.92
BCD1YHR040W CWP1P28319 239 aa3.07□□□□□ -1.92
BCD1YHR040W ACH1P32316 526 aa3.07□□□□□ -1.92
BCD1YHR040W SPT10P35208 640 aa3.07□□□□□ -1.92
BCD1YHR040W MIA40P36046 403 aa3.07□□□□□ -1.92
BCD1YHR040W ANS1P38832 159 aa3.07□□□□□ -1.92
BCD1YHR040W NSG1P38837 291 aa3.07□□□□□ -1.92
BCD1YHR040W VMA7P39111 118 aa3.07□□□□□ -1.92
BCD1YHR040W YMR144WP40214 342 aaKnown RBP3.07□□□□□ -1.92
BCD1YHR040W TOS2P50078 622 aa3.07□□□□□ -1.92
BCD1YHR040W SAY1P53324 424 aa3.07□□□□□ -1.92
BCD1YHR040W MPP6P53725 186 aaPredicted RBP3.07□□□□□ -1.92
BCD1YHR040W RSM23Q01163 450 aa3.07□□□□□ -1.92
BCD1YHR040W CTF19Q02732 369 aa3.07□□□□□ -1.92
BCD1YHR040W PRM15Q03262 622 aa3.07□□□□□ -1.92
BCD1YHR040W YDR249CQ03787 373 aa3.07□□□□□ -1.92
BCD1YHR040W MSS11Q03825 758 aa3.07□□□□□ -1.92
BCD1YHR040W MRX8Q05473 314 aa3.07□□□□□ -1.92
BCD1YHR040W MDM30Q05930 598 aa3.07□□□□□ -1.92
BCD1YHR040W YPR174CQ06616 221 aaPredicted RBP3.07□□□□□ -1.92
BCD1YHR040W IRC19Q07843 230 aa3.07□□□□□ -1.92
BCD1YHR040W RAX1Q08760 435 aa3.07□□□□□ -1.92
BCD1YHR040W FEX2Q08991 375 aa3.07□□□□□ -1.92
BCD1YHR040W ATG41Q12048 136 aa3.07□□□□□ -1.92
Retrieved 100 of 5,963 RNA–protein pairs in 124.1 ms