RNA–Protein interactions for RNA: YFL001W

DEG1, Transcript of tRNA:pseudouridine synthase, yeastyeast

Gene DEG1, Length 1,329 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DEG1YFL001W AVT7P40501 490 aa3.82□□□□□ -1.8
DEG1YFL001W SDT1P53078 280 aa3.82□□□□□ -1.8
DEG1YFL001W YGL039WP53183 348 aaKnown RBP3.82□□□□□ -1.8
DEG1YFL001W ASI3P53983 676 aa3.82□□□□□ -1.8
DEG1YFL001W YPL113CQ02961 396 aa3.82□□□□□ -1.8
DEG1YFL001W INP1Q03694 420 aa3.82□□□□□ -1.8
DEG1YFL001W BNA7Q04066 261 aa3.82□□□□□ -1.8
DEG1YFL001W ATG38Q05789 226 aaKnown RBP3.82□□□□□ -1.8
DEG1YFL001W DCR2Q05924 578 aa3.82□□□□□ -1.8
DEG1YFL001W YCT1Q12235 531 aa3.82□□□□□ -1.8
DEG1YFL001W AI5_BETAQ9ZZX0 354 aa3.82□□□□□ -1.8
DEG1YFL001W EPT1P22140 391 aa3.81□□□□□ -1.8
DEG1YFL001W EHD3P28817 500 aa3.81□□□□□ -1.8
DEG1YFL001W YEL045CP32616 141 aa3.81□□□□□ -1.8
DEG1YFL001W JEN1P36035 616 aa3.81□□□□□ -1.8
DEG1YFL001W MED8P38304 223 aa3.81□□□□□ -1.8
DEG1YFL001W SEN34P39707 275 aa3.81□□□□□ -1.8
DEG1YFL001W YJR079WP47126 109 aa3.81□□□□□ -1.8
DEG1YFL001W RAX2Q12465 1220 aa3.81□□□□□ -1.8
DEG1YFL001W YPL119C-AQ3E751 87 aa3.81□□□□□ -1.8
DEG1YFL001W SEY1Q99287 776 aa3.81□□□□□ -1.8
DEG1YFL001W RPL4AP10664 362 aaKnown RBP3.8□□□□□ -1.8
DEG1YFL001W ARC19P33204 171 aaKnown RBP3.8□□□□□ -1.8
DEG1YFL001W RIB1P38066 345 aa3.8□□□□□ -1.8
DEG1YFL001W MAL32P38158 584 aa3.8□□□□□ -1.8
DEG1YFL001W YBR096WP38256 230 aa3.8□□□□□ -1.8
DEG1YFL001W RTC3P38804 111 aaPredicted RBP3.8□□□□□ -1.8
DEG1YFL001W YRB1P41920 201 aaKnown RBP3.8□□□□□ -1.8
DEG1YFL001W MIC19P43594 170 aa3.8□□□□□ -1.8
DEG1YFL001W RPL4BP49626 362 aaKnown RBP3.8□□□□□ -1.8
DEG1YFL001W PRP24P49960 444 aaKnown RBP3.8□□□□□ -1.8
DEG1YFL001W MAL12P53341 584 aa3.8□□□□□ -1.8
DEG1YFL001W MRPS16Q02608 121 aa3.8□□□□□ -1.8
DEG1YFL001W YMR244WQ04018 355 aa3.8□□□□□ -1.8
DEG1YFL001W PAL1Q05518 499 aaKnown RBP3.8□□□□□ -1.8
DEG1YFL001W SSQ1Q05931 657 aaPredicted RBP3.8□□□□□ -1.8
DEG1YFL001W YOL029CQ08187 201 aa3.8□□□□□ -1.8
DEG1YFL001W UTP10P42945 1769 aaKnown RBP3.79□□□□□ -1.8
DEG1YFL001W YMR316C-AI2HB70 103 aa3.79□□□□□ -1.8
DEG1YFL001W TPI1P00942 248 aaKnown RBP3.79□□□□□ -1.8
DEG1YFL001W CDC33P07260 213 aaKnown RBP3.79□□□□□ -1.8
DEG1YFL001W MER1P16523 270 aa3.79□□□□□ -1.8
DEG1YFL001W YCR102CP25608 368 aa3.79□□□□□ -1.8
DEG1YFL001W IMP1P28627 190 aa3.79□□□□□ -1.8
DEG1YFL001W CAM1P29547 415 aaKnown RBP3.79□□□□□ -1.8
DEG1YFL001W ZRT3P34240 503 aa3.79□□□□□ -1.8
DEG1YFL001W MIC12P38341 106 aa3.79□□□□□ -1.8
DEG1YFL001W RRT13P40042 185 aa3.79□□□□□ -1.8
DEG1YFL001W ZRG17P53735 605 aa3.79□□□□□ -1.8
DEG1YFL001W CTF19Q02732 369 aa3.79□□□□□ -1.8
DEG1YFL001W NKP2Q06162 153 aa3.79□□□□□ -1.8
DEG1YFL001W CLP1Q08685 445 aaPredicted RBP3.79□□□□□ -1.8
DEG1YFL001W YAL063C-AQ3E791 96 aa3.79□□□□□ -1.8
DEG1YFL001W PDR18P53756 1333 aa3.79□□□□□ -1.8
DEG1YFL001W URA8P38627 578 aaPredicted RBP3.78□□□□□ -1.8
DEG1YFL001W YGL262WP53054 175 aa3.78□□□□□ -1.8
DEG1YFL001W FMP41P53889 259 aaKnown RBP3.78□□□□□ -1.8
DEG1YFL001W GIM3P53900 129 aa3.78□□□□□ -1.8
DEG1YFL001W MRS2Q01926 470 aa3.78□□□□□ -1.8
DEG1YFL001W YMR166CQ03829 368 aa3.78□□□□□ -1.8
DEG1YFL001W UTP15Q04305 513 aaKnown RBP3.78□□□□□ -1.8
DEG1YFL001W ARC18Q05933 178 aaKnown RBP3.78□□□□□ -1.8
DEG1YFL001W YPR098CQ06089 161 aa3.78□□□□□ -1.8
DEG1YFL001W ATG17Q06410 417 aa3.78□□□□□ -1.8
DEG1YFL001W RFM1Q12192 310 aa3.78□□□□□ -1.8
DEG1YFL001W SNU23Q12368 194 aaPredicted RBP3.78□□□□□ -1.8
DEG1YFL001W DFM1Q12743 341 aaKnown RBP3.78□□□□□ -1.8
DEG1YFL001W YAL067W-AQ8TGK6 75 aa3.78□□□□□ -1.8
DEG1YFL001W YOL085CQ99345 113 aa3.78□□□□□ -1.8
DEG1YFL001W RAD50P12753 1312 aa3.78□□□□□ -1.8
DEG1YFL001W POX1P13711 748 aa3.77□□□□□ -1.81
DEG1YFL001W YMR31P19955 123 aa3.77□□□□□ -1.81
DEG1YFL001W PRP18P33411 251 aaPredicted RBP3.77□□□□□ -1.81
DEG1YFL001W YKL075CP36083 450 aa3.77□□□□□ -1.81
DEG1YFL001W HEK2P38199 381 aaKnown RBP RIP-Chip data3.77□□□□□ -1.81not detected
DEG1YFL001W POP8P38208 133 aa3.77□□□□□ -1.81
DEG1YFL001W FZO1P38297 855 aa3.77□□□□□ -1.81
DEG1YFL001W SPL2P38839 148 aa3.77□□□□□ -1.81
DEG1YFL001W COX15P40086 486 aa3.77□□□□□ -1.81
DEG1YFL001W YIL012WP40551 113 aa3.77□□□□□ -1.81
DEG1YFL001W YLR152CP54072 576 aa3.77□□□□□ -1.81
DEG1YFL001W ACT1P60010 375 aaKnown RBP3.77□□□□□ -1.81
DEG1YFL001W COQ10Q08058 207 aa3.77□□□□□ -1.81
DEG1YFL001W YKL183C-AQ3E765 70 aa3.77□□□□□ -1.81
DEG1YFL001W CBP6P07253 162 aaPredicted RBP3.76□□□□□ -1.81
DEG1YFL001W YBR121C-AP0C5L4 52 aa3.76□□□□□ -1.81
DEG1YFL001W STE18P18852 110 aa3.76□□□□□ -1.81
DEG1YFL001W CAT2P32796 670 aaKnown RBP3.76□□□□□ -1.81
DEG1YFL001W CUE1P38428 203 aa3.76□□□□□ -1.81
DEG1YFL001W YHL049CP38722 271 aa3.76□□□□□ -1.81
DEG1YFL001W ECM34P38728 170 aa3.76□□□□□ -1.81
DEG1YFL001W GOS1P38736 223 aa3.76□□□□□ -1.81
DEG1YFL001W ERG28P40030 148 aa3.76□□□□□ -1.81
DEG1YFL001W PRE5P40302 234 aaKnown RBP3.76□□□□□ -1.81
DEG1YFL001W RAD17P48581 401 aa3.76□□□□□ -1.81
DEG1YFL001W ECM19Q06011 112 aa3.76□□□□□ -1.81
DEG1YFL001W GGA1Q06336 557 aa3.76□□□□□ -1.81
DEG1YFL001W DXO1Q06349 442 aa3.76□□□□□ -1.81
DEG1YFL001W TMC1Q08422 150 aaPredicted RBP3.76□□□□□ -1.81
DEG1YFL001W RRS1Q08746 203 aaKnown RBP3.76□□□□□ -1.81
Retrieved 100 of 5,963 RNA–protein pairs in 46.5 ms