RNA–Protein interactions for RNA: YDL077C

VAM6, Transcript of Subunit of the HOPS endocytic tethering complex, yeast

Gene VAM6, Length 3,150 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VAM6	YDL077C	RAD23	P32628	398 aa	Known RBP	0.99	□□□□□ -2.25
VAM6	YDL077C	UTR5	P32630	166 aa		0.99	□□□□□ -2.25
VAM6	YDL077C	TMT1	P32643	299 aa		0.99	□□□□□ -2.25
VAM6	YDL077C	YSC83	P32792	385 aa		0.99	□□□□□ -2.25
VAM6	YDL077C	CAT2	P32796	670 aa	Known RBP	0.99	□□□□□ -2.25
VAM6	YDL077C	BCS1	P32839	456 aa		0.99	□□□□□ -2.25
VAM6	YDL077C	UPS2	P35200	230 aa		0.99	□□□□□ -2.25
VAM6	YDL077C	PAU16	P35994	123 aa		0.99	□□□□□ -2.25
VAM6	YDL077C	YOR062C	P36025	268 aa		0.99	□□□□□ -2.25
VAM6	YDL077C	ALY1	P36117	915 aa		0.99	□□□□□ -2.25
VAM6	YDL077C	MRPL28	P36527	147 aa		0.99	□□□□□ -2.25
VAM6	YDL077C	YBR292C	P38357	123 aa		0.99	□□□□□ -2.25
VAM6	YDL077C	WSC4	P38739	605 aa		0.99	□□□□□ -2.25
VAM6	YDL077C	YHR127W	P38833	243 aa	Known RBP	0.99	□□□□□ -2.25
VAM6	YDL077C	FMO1	P38866	432 aa		0.99	□□□□□ -2.25
VAM6	YDL077C	MET30	P39014	640 aa		0.99	□□□□□ -2.25
VAM6	YDL077C	HAT2	P39984	401 aa		0.99	□□□□□ -2.25
VAM6	YDL077C	YIL067C	P40514	678 aa		0.99	□□□□□ -2.25
VAM6	YDL077C	SNM1	P40993	198 aa		0.99	□□□□□ -2.25
VAM6	YDL077C	OYE3	P41816	400 aa	Predicted RBP	0.99	□□□□□ -2.25
VAM6	YDL077C	PFS2	P42841	465 aa	Known RBP	0.99	□□□□□ -2.25
VAM6	YDL077C	PAU5	P43575	122 aa		0.99	□□□□□ -2.25
VAM6	YDL077C	ALK1	P43633	760 aa	Known RBP	0.99	□□□□□ -2.25
VAM6	YDL077C	BNA2	P47125	453 aa		0.99	□□□□□ -2.25
VAM6	YDL077C	TTI2	P47168	421 aa		0.99	□□□□□ -2.25
VAM6	YDL077C	RIB4	P50861	169 aa	Predicted RBP	0.99	□□□□□ -2.25
VAM6	YDL077C	MIC27	P50945	234 aa		0.99	□□□□□ -2.25
VAM6	YDL077C	YGL235W	P53071	178 aa		0.99	□□□□□ -2.25
VAM6	YDL077C	MRPL19	P53875	158 aa		0.99	□□□□□ -2.25
VAM6	YDL077C	YNL140C	P53910	189 aa		0.99	□□□□□ -2.25
VAM6	YDL077C	CRZ1	P53968	678 aa		0.99	□□□□□ -2.25
VAM6	YDL077C	SUR7	P54003	302 aa		0.99	□□□□□ -2.25
VAM6	YDL077C	YDR366C	P87287	132 aa		0.99	□□□□□ -2.25
VAM6	YDL077C	RHO4	Q00246	291 aa		0.99	□□□□□ -2.25
VAM6	YDL077C	DYN2	Q02647	92 aa		0.99	□□□□□ -2.25
VAM6	YDL077C	YPL067C	Q02754	198 aa		0.99	□□□□□ -2.25
VAM6	YDL077C	GAS3	Q03655	524 aa		0.99	□□□□□ -2.25
VAM6	YDL077C	YDR248C	Q03786	193 aa		0.99	□□□□□ -2.25
VAM6	YDL077C	RAV2	Q03956	351 aa		0.99	□□□□□ -2.25
VAM6	YDL077C	UTP15	Q04305	513 aa	Known RBP	0.99	□□□□□ -2.25
VAM6	YDL077C	GMC1	Q04399	608 aa		0.99	□□□□□ -2.25
VAM6	YDL077C	SSL1	Q04673	461 aa	Predicted RBP	0.99	□□□□□ -2.25
VAM6	YDL077C	DAL4	Q04895	635 aa		0.99	□□□□□ -2.25
VAM6	YDL077C	YPR114W	Q06107	315 aa		0.99	□□□□□ -2.25
VAM6	YDL077C	SKG3	Q06315	1026 aa		0.99	□□□□□ -2.25
VAM6	YDL077C	SCP1	Q08873	200 aa		0.99	□□□□□ -2.25
VAM6	YDL077C	OXR1	Q08952	273 aa		0.99	□□□□□ -2.25
VAM6	YDL077C	SLF1	Q12034	447 aa	Known RBP	0.99	□□□□□ -2.25
VAM6	YDL077C	GLO4	Q12320	285 aa		0.99	□□□□□ -2.25
VAM6	YDL077C	PDH1	Q12428	516 aa	Known RBP	0.99	□□□□□ -2.25
VAM6	YDL077C	FOL3	Q12676	427 aa	Predicted RBP	0.99	□□□□□ -2.25
VAM6	YDL077C	DFM1	Q12743	341 aa	Known RBP	0.99	□□□□□ -2.25
VAM6	YDL077C	YLR412C-A	Q3E742	68 aa		0.99	□□□□□ -2.25
VAM6	YDL077C	RPS25A	Q3E792	108 aa	Predicted RBP	0.99	□□□□□ -2.25
VAM6	YDL077C	YNR034W-A	Q3E841	98 aa		0.99	□□□□□ -2.25
VAM6	YDL077C	YKL033W-A	Q86ZR7	236 aa		0.99	□□□□□ -2.25
VAM6	YDL077C	IZH4	Q99393	312 aa		0.99	□□□□□ -2.25
VAM6	YDL077C	ADH2	P00331	348 aa	Known RBP	0.98	□□□□□ -2.25
VAM6	YDL077C	RPL9A	P05738	191 aa	Known RBP	0.98	□□□□□ -2.25
VAM6	YDL077C	RPS9B	P05755	195 aa	Known RBP	0.98	□□□□□ -2.25
VAM6	YDL077C	ADK1	P07170	222 aa	Known RBP	0.98	□□□□□ -2.25
VAM6	YDL077C	UBI4	P0CG63	381 aa	Known RBP	0.98	□□□□□ -2.25
VAM6	YDL077C	RPL40A	P0CH08	128 aa	Known RBP	0.98	□□□□□ -2.25
VAM6	YDL077C	RPL40B	P0CH09	128 aa	Known RBP	0.98	□□□□□ -2.25
VAM6	YDL077C	COX10	P21592	462 aa		0.98	□□□□□ -2.25
VAM6	YDL077C	MEK1	P24719	497 aa	Predicted RBP	0.98	□□□□□ -2.25
VAM6	YDL077C	YCR023C	P25351	611 aa		0.98	□□□□□ -2.25
VAM6	YDL077C	RER1	P25560	188 aa		0.98	□□□□□ -2.25
VAM6	YDL077C	MGT1	P26188	188 aa		0.98	□□□□□ -2.25
VAM6	YDL077C	POP5	P28005	173 aa		0.98	□□□□□ -2.25
VAM6	YDL077C	GAC1	P28006	793 aa		0.98	□□□□□ -2.25
VAM6	YDL077C	MRP17	P28778	131 aa		0.98	□□□□□ -2.25
VAM6	YDL077C	AAR2	P32357	355 aa	Predicted RBP	0.98	□□□□□ -2.25
VAM6	YDL077C	UTR4	P32626	227 aa		0.98	□□□□□ -2.25
VAM6	YDL077C	FMT1	P32785	401 aa		0.98	□□□□□ -2.25
VAM6	YDL077C	ZRT1	P32804	376 aa		0.98	□□□□□ -2.25
VAM6	YDL077C	PTK1	P36002	662 aa	Predicted RBP	0.98	□□□□□ -2.25
VAM6	YDL077C	SRY1	P36007	326 aa		0.98	□□□□□ -2.25
VAM6	YDL077C	SHE2	P36068	246 aa	Known RBP RIP-Chip data	0.98	□□□□□ -2.25	not detected
VAM6	YDL077C	YKR041W	P36134	250 aa		0.98	□□□□□ -2.25
VAM6	YDL077C	YKR075C	P36155	307 aa		0.98	□□□□□ -2.25
VAM6	YDL077C	YBR090C	P38253	122 aa		0.98	□□□□□ -2.25
VAM6	YDL077C	YBR220C	P38318	560 aa		0.98	□□□□□ -2.25
VAM6	YDL077C	PHO89	P38361	574 aa		0.98	□□□□□ -2.25
VAM6	YDL077C	YHR033W	P38690	423 aa		0.98	□□□□□ -2.25
VAM6	YDL077C	LRP1	P38801	184 aa	Known RBP	0.98	□□□□□ -2.25
VAM6	YDL077C	MGS1	P40151	587 aa		0.98	□□□□□ -2.25
VAM6	YDL077C	COA1	P40452	197 aa		0.98	□□□□□ -2.25
VAM6	YDL077C	YIL152W	P40455	235 aa		0.98	□□□□□ -2.25
VAM6	YDL077C	LYS12	P40495	371 aa	Known RBP	0.98	□□□□□ -2.25
VAM6	YDL077C	SYS1	P41544	203 aa		0.98	□□□□□ -2.25
VAM6	YDL077C	SSU1	P41930	458 aa		0.98	□□□□□ -2.25
VAM6	YDL077C	SMD3	P43321	101 aa	Known RBP	0.98	□□□□□ -2.25
VAM6	YDL077C	ATG18	P43601	500 aa		0.98	□□□□□ -2.25
VAM6	YDL077C	TAH11	P47112	604 aa		0.98	□□□□□ -2.25
VAM6	YDL077C	YJR056C	P47115	236 aa		0.98	□□□□□ -2.25
VAM6	YDL077C	AIM25	P47140	327 aa		0.98	□□□□□ -2.25
VAM6	YDL077C	HSV2	P50079	448 aa	Predicted RBP	0.98	□□□□□ -2.25
VAM6	YDL077C	RPL9B	P51401	191 aa	Known RBP	0.98	□□□□□ -2.25
VAM6	YDL077C	SCS3	P53012	380 aa		0.98	□□□□□ -2.25

Retrieved 100 of 5,963 RNA–protein pairs in 33.5 ms