RNA–Protein interactions for RNA: YDL042C

SIR2, Transcript of Conserved NAD+ dependent histone deacetylase of the Sirtuin family, yeast

Gene SIR2, Length 1,689 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SIR2	YDL042C	TAD2	P47058	250 aa		4.1	□□□□□ -1.75
SIR2	YDL042C	PER33	Q12144	273 aa		4.1	□□□□□ -1.75
SIR2	YDL042C	FAB1	P34756	2278 aa		4.1	□□□□□ -1.75
SIR2	YDL042C	PHO80	P20052	293 aa		4.1	□□□□□ -1.75
SIR2	YDL042C	ATG15	P25641	520 aa		4.1	□□□□□ -1.75
SIR2	YDL042C	AVT6	P40074	448 aa		4.1	□□□□□ -1.75
SIR2	YDL042C	YIL059C	P40520	121 aa		4.1	□□□□□ -1.75
SIR2	YDL042C	YNL134C	P53912	376 aa	Known RBP	4.1	□□□□□ -1.75
SIR2	YDL042C	CDC14	Q00684	551 aa		4.1	□□□□□ -1.75
SIR2	YDL042C	ARV1	Q06541	321 aa		4.1	□□□□□ -1.75
SIR2	YDL042C	YUH1	P35127	236 aa		4.09	□□□□□ -1.76
SIR2	YDL042C	YKT6	P36015	200 aa	Known RBP	4.09	□□□□□ -1.76
SIR2	YDL042C	ATG12	P38316	186 aa		4.09	□□□□□ -1.76
SIR2	YDL042C	YHL044W	P38727	235 aa		4.09	□□□□□ -1.76
SIR2	YDL042C	SYS1	P41544	203 aa		4.09	□□□□□ -1.76
SIR2	YDL042C	SEC10	Q06245	871 aa		4.09	□□□□□ -1.76
SIR2	YDL042C	YPR195C	Q06594	109 aa		4.09	□□□□□ -1.76
SIR2	YDL042C	YLR422W	Q06409	1932 aa		4.08	□□□□□ -1.76
SIR2	YDL042C	COX2	P00410	251 aa		4.08	□□□□□ -1.76
SIR2	YDL042C	PRE7	P23724	241 aa	Known RBP	4.08	□□□□□ -1.76
SIR2	YDL042C	RSA4	P25382	515 aa	Known RBP	4.08	□□□□□ -1.76
SIR2	YDL042C	NPT1	P39683	429 aa	Known RBP	4.08	□□□□□ -1.76
SIR2	YDL042C	YJL118W	P47022	219 aa		4.08	□□□□□ -1.76
SIR2	YDL042C	COX20	Q04935	205 aa		4.08	□□□□□ -1.76
SIR2	YDL042C	IES3	Q12345	250 aa		4.08	□□□□□ -1.76
SIR2	YDL042C	YAL064W-B	O13512	126 aa		4.07	□□□□□ -1.76
SIR2	YDL042C	POP8	P38208	133 aa		4.07	□□□□□ -1.76
SIR2	YDL042C	ATC1	Q04005	294 aa		4.07	□□□□□ -1.76
SIR2	YDL042C	YDR222W	Q04925	415 aa		4.07	□□□□□ -1.76
SIR2	YDL042C	NNT1	Q05874	261 aa		4.07	□□□□□ -1.76
SIR2	YDL042C	YMR316C-A	I2HB70	103 aa		4.06	□□□□□ -1.76
SIR2	YDL042C	RPL4A	P10664	362 aa	Known RBP	4.06	□□□□□ -1.76
SIR2	YDL042C	PEX3	P28795	441 aa		4.06	□□□□□ -1.76
SIR2	YDL042C	KRE6	P32486	720 aa		4.06	□□□□□ -1.76
SIR2	YDL042C	IME2	P32581	645 aa		4.06	□□□□□ -1.76
SIR2	YDL042C	CAT2	P32796	670 aa	Known RBP	4.06	□□□□□ -1.76
SIR2	YDL042C	RPL4B	P49626	362 aa	Known RBP	4.06	□□□□□ -1.76
SIR2	YDL042C	OSH6	Q02201	448 aa		4.06	□□□□□ -1.76
SIR2	YDL042C	GTO3	Q04806	366 aa		4.06	□□□□□ -1.76
SIR2	YDL042C	LOA1	Q06508	300 aa		4.06	□□□□□ -1.76
SIR2	YDL042C	CTR3	Q06686	241 aa		4.06	□□□□□ -1.76
SIR2	YDL042C	RRT8	Q08219	342 aa		4.06	□□□□□ -1.76
SIR2	YDL042C	PRM7	Q12459	698 aa		4.06	□□□□□ -1.76
SIR2	YDL042C	HIS1	P00498	297 aa	Known RBP	4.06	□□□□□ -1.76
SIR2	YDL042C	POL30	P15873	258 aa	Known RBP	4.06	□□□□□ -1.76
SIR2	YDL042C	AGA2	P32781	87 aa		4.06	□□□□□ -1.76
SIR2	YDL042C	PRM9	P39551	298 aa		4.06	□□□□□ -1.76
SIR2	YDL042C	YFR045W	P43617	309 aa		4.06	□□□□□ -1.76
SIR2	YDL042C	SWT21	P53873	357 aa	Predicted RBP	4.06	□□□□□ -1.76
SIR2	YDL042C	ALG11	P53954	548 aa	Known RBP	4.06	□□□□□ -1.76
SIR2	YDL042C	SGT2	Q12118	346 aa	Known RBP	4.06	□□□□□ -1.76
SIR2	YDL042C	YPR063C	Q12160	140 aa		4.06	□□□□□ -1.76
SIR2	YDL042C	YOS9	Q99220	542 aa		4.06	□□□□□ -1.76
SIR2	YDL042C	YAK1	P14680	807 aa		4.05	□□□□□ -1.76
SIR2	YDL042C	CAM1	P29547	415 aa	Known RBP	4.05	□□□□□ -1.76
SIR2	YDL042C	HMT1	P38074	348 aa		4.05	□□□□□ -1.76
SIR2	YDL042C	SER33	P40510	469 aa		4.05	□□□□□ -1.76
SIR2	YDL042C	YAR1	P46683	200 aa		4.05	□□□□□ -1.76
SIR2	YDL042C	CPR7	P47103	393 aa		4.05	□□□□□ -1.76
SIR2	YDL042C	HSH155	P49955	971 aa	Known RBP	4.05	□□□□□ -1.76
SIR2	YDL042C	MNT4	P53745	580 aa		4.05	□□□□□ -1.76
SIR2	YDL042C	OST6	Q03723	332 aa		4.05	□□□□□ -1.76
SIR2	YDL042C	GIS3	Q12418	502 aa		4.05	□□□□□ -1.76
SIR2	YDL042C	HAP2	P06774	265 aa		4.04	□□□□□ -1.76
SIR2	YDL042C	YBL081W	P38180	368 aa	Known RBP	4.04	□□□□□ -1.76
SIR2	YDL042C	PHO89	P38361	574 aa		4.04	□□□□□ -1.76
SIR2	YDL042C	DDI1	P40087	428 aa		4.04	□□□□□ -1.76
SIR2	YDL042C	TIM21	P53220	239 aa		4.04	□□□□□ -1.76
SIR2	YDL042C	TIM8	P57744	87 aa		4.04	□□□□□ -1.76
SIR2	YDL042C	SDC1	Q03323	175 aa		4.04	□□□□□ -1.76
SIR2	YDL042C	CDD1	Q06549	142 aa		4.04	□□□□□ -1.76
SIR2	YDL042C	MED8	P38304	223 aa		4.03	□□□□□ -1.76
SIR2	YDL042C	ECO1	P43605	281 aa		4.03	□□□□□ -1.76
SIR2	YDL042C	FMP41	P53889	259 aa	Known RBP	4.03	□□□□□ -1.76
SIR2	YDL042C	EBS1	Q03466	884 aa	Known RBP	4.03	□□□□□ -1.76
SIR2	YDL042C	DXO1	Q06349	442 aa		4.03	□□□□□ -1.76
SIR2	YDL042C	BTS1	Q12051	335 aa		4.03	□□□□□ -1.76
SIR2	YDL042C	YOL107W	Q12239	342 aa		4.03	□□□□□ -1.76
SIR2	YDL042C	RPS23A	P0CX29	145 aa	Known RBP	4.03	□□□□□ -1.76
SIR2	YDL042C	RPS23B	P0CX30	145 aa		4.03	□□□□□ -1.76
SIR2	YDL042C	ALK2	P32789	676 aa	Predicted RBP	4.03	□□□□□ -1.76
SIR2	YDL042C	RPT5	P33297	434 aa	Known RBP	4.03	□□□□□ -1.76
SIR2	YDL042C	RSM25	P40496	264 aa		4.03	□□□□□ -1.76
SIR2	YDL042C	ATG5	Q12380	294 aa		4.03	□□□□□ -1.76
SIR2	YDL042C	LAA1	P39526	2014 aa		4.03	□□□□□ -1.76
SIR2	YDL042C	YOL163W	P0CF20	169 aa		4.02	□□□□□ -1.77
SIR2	YDL042C	MRP1	P10662	321 aa	Known RBP	4.02	□□□□□ -1.77
SIR2	YDL042C	RSR1	P13856	272 aa		4.02	□□□□□ -1.77
SIR2	YDL042C	TLG1	Q03322	224 aa		4.02	□□□□□ -1.77
SIR2	YDL042C	ADH6	Q04894	360 aa	Known RBP	4.02	□□□□□ -1.77
SIR2	YDL042C	SME1	Q12330	94 aa	Predicted RBP	4.02	□□□□□ -1.77
SIR2	YDL042C	MSF1	P08425	469 aa		4.01	□□□□□ -1.77
SIR2	YDL042C	DAL82	P21705	255 aa		4.01	□□□□□ -1.77
SIR2	YDL042C	ERG2	P32352	222 aa		4.01	□□□□□ -1.77
SIR2	YDL042C	YET1	P35723	206 aa		4.01	□□□□□ -1.77
SIR2	YDL042C	ECM14	P38836	430 aa		4.01	□□□□□ -1.77
SIR2	YDL042C	RPE1	P46969	238 aa		4.01	□□□□□ -1.77
SIR2	YDL042C	NBP35	P52920	328 aa		4.01	□□□□□ -1.77
SIR2	YDL042C	RSM27	P53305	110 aa		4.01	□□□□□ -1.77
SIR2	YDL042C	NOP13	P53883	403 aa	Known RBP RIP-Chip data	4.01	□□□□□ -1.77	not detected

Retrieved 100 of 5,963 RNA–protein pairs in 16.8 ms