RNA–Protein interactions for RNA: YBR170C

NPL4, Transcript of Substrate-recruiting cofactor of the Cdc48p-Npl4p-Ufd1p segregase, yeastyeast

Gene NPL4, Length 1,743 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NPL4YBR170C PHO89P38361 574 aa3.42□□□□□ -1.86
NPL4YBR170C FRT2P39734 528 aa3.42□□□□□ -1.86
NPL4YBR170C COS4P43542 379 aa3.42□□□□□ -1.86
NPL4YBR170C RMR1P53060 241 aa3.42□□□□□ -1.86
NPL4YBR170C YGL118CP53132 145 aa3.42□□□□□ -1.86
NPL4YBR170C MRH4P53166 561 aa3.42□□□□□ -1.86
NPL4YBR170C YLR152CP54072 576 aa3.42□□□□□ -1.86
NPL4YBR170C MRPS16Q02608 121 aa3.42□□□□□ -1.86
NPL4YBR170C FAR8Q05040 523 aa3.42□□□□□ -1.86
NPL4YBR170C HEM25Q07534 307 aa3.42□□□□□ -1.86
NPL4YBR170C PPH21P23594 369 aa3.41□□□□□ -1.86
NPL4YBR170C ATP7P30902 174 aa3.41□□□□□ -1.86
NPL4YBR170C ECM4P36156 370 aa3.41□□□□□ -1.86
NPL4YBR170C MRPL39P36533 70 aa3.41□□□□□ -1.86
NPL4YBR170C YGL262WP53054 175 aa3.41□□□□□ -1.86
NPL4YBR170C TOS8P53147 276 aa3.41□□□□□ -1.86
NPL4YBR170C CDD1Q06549 142 aa3.41□□□□□ -1.86
NPL4YBR170C TPO4Q12256 659 aa3.41□□□□□ -1.86
NPL4YBR170C TUS1Q06412 1307 aa3.41□□□□□ -1.86
NPL4YBR170C PSK1P31374 1356 aa3.41□□□□□ -1.86
NPL4YBR170C RPB9P27999 122 aa3.41□□□□□ -1.86
NPL4YBR170C ERG2P32352 222 aa3.41□□□□□ -1.86
NPL4YBR170C YHI9P38765 294 aa3.41□□□□□ -1.86
NPL4YBR170C YHB1P39676 399 aaKnown RBP3.41□□□□□ -1.86
NPL4YBR170C YMR144WP40214 342 aaKnown RBP3.41□□□□□ -1.86
NPL4YBR170C YIL054WP40524 105 aa3.41□□□□□ -1.86
NPL4YBR170C HOP2P53187 214 aa3.41□□□□□ -1.86
NPL4YBR170C FYV6P53913 173 aa3.41□□□□□ -1.86
NPL4YBR170C DIA1P54005 336 aa3.41□□□□□ -1.86
NPL4YBR170C NOP1P15646 327 aaKnown RBP3.4□□□□□ -1.87
NPL4YBR170C CSG2P35206 410 aa3.4□□□□□ -1.87
NPL4YBR170C DBP7P36120 742 aaKnown RBP3.4□□□□□ -1.87
NPL4YBR170C ARN2P38724 620 aa3.4□□□□□ -1.87
NPL4YBR170C ECM34P38728 170 aa3.4□□□□□ -1.87
NPL4YBR170C ASP1P38986 381 aaPredicted RBP3.4□□□□□ -1.87
NPL4YBR170C BMT5P40493 336 aa3.4□□□□□ -1.87
NPL4YBR170C BRR6P53062 197 aa3.4□□□□□ -1.87
NPL4YBR170C YGL034CP53186 121 aa3.4□□□□□ -1.87
NPL4YBR170C SWT21P53873 357 aaPredicted RBP3.4□□□□□ -1.87
NPL4YBR170C YNL046WP53956 172 aa3.4□□□□□ -1.87
NPL4YBR170C YOR186WQ08560 144 aa3.4□□□□□ -1.87
NPL4YBR170C YPL229WQ99395 206 aa3.4□□□□□ -1.87
NPL4YBR170C KSS1P14681 368 aa3.39□□□□□ -1.87
NPL4YBR170C URA6P15700 204 aa3.39□□□□□ -1.87
NPL4YBR170C YEL045CP32616 141 aa3.39□□□□□ -1.87
NPL4YBR170C YIL001WP40560 513 aa3.39□□□□□ -1.87
NPL4YBR170C IRC18P47056 224 aa3.39□□□□□ -1.87
NPL4YBR170C SDT1P53078 280 aa3.39□□□□□ -1.87
NPL4YBR170C SYC1Q08553 188 aaPredicted RBP3.39□□□□□ -1.87
NPL4YBR170C ATG5Q12380 294 aa3.39□□□□□ -1.87
NPL4YBR170C FLO11P08640 1367 aa3.39□□□□□ -1.87
NPL4YBR170C ERD2P18414 219 aa3.39□□□□□ -1.87
NPL4YBR170C COX10P21592 462 aa3.39□□□□□ -1.87
NPL4YBR170C SRY1P36007 326 aa3.39□□□□□ -1.87
NPL4YBR170C EGD2P38879 174 aaKnown RBP3.39□□□□□ -1.87
NPL4YBR170C SYS1P41544 203 aa3.39□□□□□ -1.87
NPL4YBR170C OST3P48439 350 aa3.39□□□□□ -1.87
NPL4YBR170C ERG10P41338 398 aaKnown RBP3.38□□□□□ -1.87
NPL4YBR170C UFE1P41834 346 aa3.38□□□□□ -1.87
NPL4YBR170C UFD1P53044 361 aa3.38□□□□□ -1.87
NPL4YBR170C YGR018CP53211 109 aa3.38□□□□□ -1.87
NPL4YBR170C GIS2P53849 153 aaKnown RBP RIP-Chip data3.38□□□□□ -1.87not detected
NPL4YBR170C GOT1Q03554 138 aa3.38□□□□□ -1.87
NPL4YBR170C GIM5Q04493 163 aa3.38□□□□□ -1.87
NPL4YBR170C YDR124WQ04608 324 aa3.38□□□□□ -1.87
NPL4YBR170C GPM2Q12008 311 aa3.38□□□□□ -1.87
NPL4YBR170C CMC2Q3E7A4 109 aa3.38□□□□□ -1.87
NPL4YBR170C YBL008W-AQ3E821 79 aa3.38□□□□□ -1.87
NPL4YBR170C ADH1P00330 348 aaKnown RBP3.37□□□□□ -1.87
NPL4YBR170C CBP6P07253 162 aaPredicted RBP3.37□□□□□ -1.87
NPL4YBR170C YCR087C-AP37263 153 aa3.37□□□□□ -1.87
NPL4YBR170C YBL081WP38180 368 aaKnown RBP3.37□□□□□ -1.87
NPL4YBR170C YHL044WP38727 235 aa3.37□□□□□ -1.87
NPL4YBR170C TRM5P38793 499 aa3.37□□□□□ -1.87
NPL4YBR170C SEC72P39742 193 aaKnown RBP3.37□□□□□ -1.87
NPL4YBR170C RPE1P46969 238 aa3.37□□□□□ -1.87
NPL4YBR170C CAX4P53223 239 aa3.37□□□□□ -1.87
NPL4YBR170C SYF2P53277 215 aaPredicted RBP3.37□□□□□ -1.87
NPL4YBR170C YPL039WQ03080 316 aa3.37□□□□□ -1.87
NPL4YBR170C NNT1Q05874 261 aa3.37□□□□□ -1.87
NPL4YBR170C TMC1Q08422 150 aaPredicted RBP3.37□□□□□ -1.87
NPL4YBR170C MRX4Q12467 430 aa3.37□□□□□ -1.87
NPL4YBR170C COX5AP00424 153 aa3.36□□□□□ -1.87
NPL4YBR170C MSA1Q08471 629 aa3.36□□□□□ -1.87
NPL4YBR170C YPS3Q12303 508 aa3.36□□□□□ -1.87
NPL4YBR170C MET2P08465 486 aa3.36□□□□□ -1.87
NPL4YBR170C DBF2P22204 572 aa3.36□□□□□ -1.87
NPL4YBR170C PDR17P53844 350 aa3.36□□□□□ -1.87
NPL4YBR170C OSH6Q02201 448 aa3.36□□□□□ -1.87
NPL4YBR170C TSA2Q04120 196 aa3.36□□□□□ -1.87
NPL4YBR170C FUS2Q05670 677 aa3.36□□□□□ -1.87
NPL4YBR170C GRE1Q08969 168 aa3.36□□□□□ -1.87
NPL4YBR170C CDC28P00546 298 aaKnown RBP3.35□□□□□ -1.87
NPL4YBR170C HSP26P15992 214 aaKnown RBP RIP-Chip data3.35□□□□□ -1.87not detected
NPL4YBR170C PCL1P24867 279 aa3.35□□□□□ -1.87
NPL4YBR170C SPS18P32572 300 aa3.35□□□□□ -1.87
NPL4YBR170C EMI1Q04406 187 aa3.35□□□□□ -1.87
NPL4YBR170C MCH1Q07376 486 aa3.35□□□□□ -1.87
NPL4YBR170C YPR011CQ12251 326 aa3.35□□□□□ -1.87
NPL4YBR170C TIM22Q12328 207 aa3.35□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 17.7 ms