RNA–Protein interactions for RNA: ENST00000642137.1

LINC00339-213, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 222 nt, Biotype transcribed processed pseudogene, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-213ENST00000642137 PARD3BQ8TEW8 1205 aa13.38□□□□□ -0.27
LINC00339-213ENST00000642137 RSPH1Q8WYR4 309 aa13.38□□□□□ -0.27
LINC00339-213ENST00000642137 APOL6Q9BWW8 343 aa13.38□□□□□ -0.27
LINC00339-213ENST00000642137 RBSNQ9H1K0 784 aa13.38□□□□□ -0.27
LINC00339-213ENST00000642137 HSD3B7Q9H2F3 369 aa13.38□□□□□ -0.27
LINC00339-213ENST00000642137 RSAD1Q9HA92 442 aa13.38□□□□□ -0.27
LINC00339-213ENST00000642137 RBAKQ9NYW8 714 aaPredicted RBP13.38□□□□□ -0.27
LINC00339-213ENST00000642137 MAGEC2Q9UBF1 373 aaPredicted RBP13.38□□□□□ -0.27
LINC00339-213ENST00000642137 ARMCX3Q9UH62 379 aaPredicted RBP13.38□□□□□ -0.27
LINC00339-213ENST00000642137 LRFN2Q9ULH4 789 aa13.38□□□□□ -0.27
LINC00339-213ENST00000642137 TRIP11Q15643 1979 aa13.38□□□□□ -0.27
LINC00339-213ENST00000642137 KCNJ18B7U540 433 aa13.37□□□□□ -0.27
LINC00339-213ENST00000642137 INPPL1O15357 1258 aa13.37□□□□□ -0.27
LINC00339-213ENST00000642137 HOXA2O43364 376 aa13.37□□□□□ -0.27
LINC00339-213ENST00000642137 OFD1O75665 1012 aa13.37□□□□□ -0.27
LINC00339-213ENST00000642137 RECQL4O94761 1208 aa13.37□□□□□ -0.27
LINC00339-213ENST00000642137 CXCL8P10145 99 aa13.37□□□□□ -0.27
LINC00339-213ENST00000642137 MAGEA10P43363 369 aaPredicted RBP13.37□□□□□ -0.27
LINC00339-213ENST00000642137 KCNJ6P48051 423 aa13.37□□□□□ -0.27
LINC00339-213ENST00000642137 VAMP7P51809 220 aa13.37□□□□□ -0.27
LINC00339-213ENST00000642137 WDR5P61964 334 aaKnown RBP13.37□□□□□ -0.27
LINC00339-213ENST00000642137 CLDN10P78369 228 aa13.37□□□□□ -0.27
LINC00339-213ENST00000642137 PPP2R3AQ06190 1150 aa13.37□□□□□ -0.27
LINC00339-213ENST00000642137 BFSP1Q12934 665 aa13.37□□□□□ -0.27
LINC00339-213ENST00000642137 KCNJ12Q14500 433 aa13.37□□□□□ -0.27
LINC00339-213ENST00000642137 TCP11X2Q5H9J9 407 aa13.37□□□□□ -0.27
LINC00339-213ENST00000642137 CREBRFQ8IUR6 639 aa13.37□□□□□ -0.27
LINC00339-213ENST00000642137 PHOSPHO2Q8TCD6 241 aa13.37□□□□□ -0.27
LINC00339-213ENST00000642137 LPPQ93052 612 aa13.37□□□□□ -0.27
LINC00339-213ENST00000642137 CNOT6LQ96LI5 555 aaKnown RBP13.37□□□□□ -0.27
LINC00339-213ENST00000642137 FNBP1Q96RU3 617 aa13.37□□□□□ -0.27
LINC00339-213ENST00000642137 MTIF3Q9H2K0 278 aaKnown RBP13.37□□□□□ -0.27
LINC00339-213ENST00000642137 CNTN3Q9P232 1028 aa13.37□□□□□ -0.27
LINC00339-213ENST00000642137 PCDH10Q9P2E7 1040 aa13.37□□□□□ -0.27
LINC00339-213ENST00000642137 DERAQ9Y315 318 aa13.37□□□□□ -0.27
LINC00339-213ENST00000642137 ANK1P16157 1881 aa13.36□□□□□ -0.27
LINC00339-213ENST00000642137 MEIS3P2A8K0S8 358 aa13.36□□□□□ -0.27
LINC00339-213ENST00000642137 MEFVO15553 781 aaPredicted RBP13.36□□□□□ -0.27
LINC00339-213ENST00000642137 PRKCSHP14314 528 aaPredicted RBP13.36□□□□□ -0.27
LINC00339-213ENST00000642137 KCNE1P15382 129 aa13.36□□□□□ -0.27
LINC00339-213ENST00000642137 AP3M2P53677 418 aa13.36□□□□□ -0.27
LINC00339-213ENST00000642137 UVSSAQ2YD98 709 aa13.36□□□□□ -0.27
LINC00339-213ENST00000642137 RASIP1Q5U651 963 aa13.36□□□□□ -0.27
LINC00339-213ENST00000642137 TRIM59Q8IWR1 403 aa13.36□□□□□ -0.27
LINC00339-213ENST00000642137 RNF169Q8NCN4 708 aa13.36□□□□□ -0.27
LINC00339-213ENST00000642137 RNF214Q8ND24 703 aa13.36□□□□□ -0.27
LINC00339-213ENST00000642137 ANKRD20A12PQ8NF67 263 aa13.36□□□□□ -0.27
LINC00339-213ENST00000642137 CACTINQ8WUQ7 758 aaKnown RBP13.36□□□□□ -0.27
LINC00339-213ENST00000642137 FAM212AQ96EL1 285 aa13.36□□□□□ -0.27
LINC00339-213ENST00000642137 SNX27Q96L92 541 aa13.36□□□□□ -0.27
LINC00339-213ENST00000642137 GDF15Q99988 308 aa13.36□□□□□ -0.27
LINC00339-213ENST00000642137 PDE11AQ9HCR9 933 aa13.36□□□□□ -0.27
LINC00339-213ENST00000642137 RNF19AQ9NV58 838 aa13.36□□□□□ -0.27
LINC00339-213ENST00000642137 MIOSQ9NXC5 875 aa13.36□□□□□ -0.27
LINC00339-213ENST00000642137 KLK14Q9P0G3 267 aa13.36□□□□□ -0.27
LINC00339-213ENST00000642137 KANSL3Q9P2N6 904 aa13.36□□□□□ -0.27
LINC00339-213ENST00000642137 LIMA1Q9UHB6 759 aaKnown RBP13.36□□□□□ -0.27
LINC00339-213ENST00000642137 C2CD2Q9Y426 696 aa13.36□□□□□ -0.27
LINC00339-213ENST00000642137 SMIM28A0A1B0GU29 152 aa13.35□□□□□ -0.27
LINC00339-213ENST00000642137 ARL5CA6NH57 179 aa13.35□□□□□ -0.27
LINC00339-213ENST00000642137 ZBBXA8MT70 800 aa13.35□□□□□ -0.27
LINC00339-213ENST00000642137 H0YGN5 161 aa13.35□□□□□ -0.27
LINC00339-213ENST00000642137 STX10O60499 249 aa13.35□□□□□ -0.27
LINC00339-213ENST00000642137 IBSPP21815 317 aaPredicted RBP13.35□□□□□ -0.27
LINC00339-213ENST00000642137 GTF2H1P32780 548 aa13.35□□□□□ -0.27
LINC00339-213ENST00000642137 BMP8BP34820 402 aa13.35□□□□□ -0.27
LINC00339-213ENST00000642137 MTIF2P46199 727 aaKnown RBP13.35□□□□□ -0.27
LINC00339-213ENST00000642137 WNT7BP56706 349 aa13.35□□□□□ -0.27
LINC00339-213ENST00000642137 DEFB103AP81534 67 aa13.35□□□□□ -0.27
LINC00339-213ENST00000642137 ZBTB6Q15916 424 aa13.35□□□□□ -0.27
LINC00339-213ENST00000642137 HSP90AA4PQ58FG1 418 aa13.35□□□□□ -0.27
LINC00339-213ENST00000642137 GLB1LQ6UWU2 654 aa13.35□□□□□ -0.27
LINC00339-213ENST00000642137 WDR49Q8IV35 697 aa13.35□□□□□ -0.27
LINC00339-213ENST00000642137 GSTCDQ8NEC7 633 aa13.35□□□□□ -0.27
LINC00339-213ENST00000642137 PLEKHO2Q8TD55 490 aa13.35□□□□□ -0.27
LINC00339-213ENST00000642137 CCDC127Q96BQ5 260 aa13.35□□□□□ -0.27
LINC00339-213ENST00000642137 CASD1Q96PB1 797 aa13.35□□□□□ -0.27
LINC00339-213ENST00000642137 RPS6KC1Q96S38 1066 aa13.35□□□□□ -0.27
LINC00339-213ENST00000642137 GAD1Q99259 594 aa13.35□□□□□ -0.27
LINC00339-213ENST00000642137 CGRRF1Q99675 332 aa13.35□□□□□ -0.27
LINC00339-213ENST00000642137 TUBGCP2Q9BSJ2 902 aa13.35□□□□□ -0.27
LINC00339-213ENST00000642137 TMEM117Q9H0C3 514 aa13.35□□□□□ -0.27
LINC00339-213ENST00000642137 INTS13Q9NVM9 706 aa13.35□□□□□ -0.27
LINC00339-213ENST00000642137 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.35□□□□□ -0.27
LINC00339-213ENST00000642137 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.35□□□□□ -0.27
LINC00339-213ENST00000642137 SLC4A7Q9Y6M7 1214 aa13.35□□□□□ -0.27
LINC00339-213ENST00000642137 RALGAPA2Q2PPJ7 1873 aa13.34□□□□□ -0.27
LINC00339-213ENST00000642137 LRRIQ3A6PVS8 624 aaPredicted RBP13.34□□□□□ -0.27
LINC00339-213ENST00000642137 PMM2O15305 246 aa13.34□□□□□ -0.27
LINC00339-213ENST00000642137 XPOTO43592 962 aaKnown RBP13.34□□□□□ -0.27
LINC00339-213ENST00000642137 CAPN15O75808 1086 aa13.34□□□□□ -0.27
LINC00339-213ENST00000642137 DGKIO75912 1065 aa13.34□□□□□ -0.27
LINC00339-213ENST00000642137 UPP2O95045 317 aa13.34□□□□□ -0.27
LINC00339-213ENST00000642137 THP07101 528 aa13.34□□□□□ -0.27
LINC00339-213ENST00000642137 DLATP10515 647 aaKnown RBP13.34□□□□□ -0.27
LINC00339-213ENST00000642137 TNNI1P19237 187 aa13.34□□□□□ -0.27
LINC00339-213ENST00000642137 CYP3A5P20815 502 aa13.34□□□□□ -0.27
LINC00339-213ENST00000642137 DLG4P78352 724 aa13.34□□□□□ -0.27
LINC00339-213ENST00000642137 MLLT1Q03111 559 aaPredicted RBP13.34□□□□□ -0.27
LINC00339-213ENST00000642137 KCNH2Q12809 1159 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms