RNA–Protein interactions for RNA: ENST00000641513.1

PHGDH-219, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-219ENST00000641513 CPB2Q96IY4 423 aa9.57□□□□□ -0.88
PHGDH-219ENST00000641513 EIF3CQ99613 913 aaKnown RBP9.57□□□□□ -0.88
PHGDH-219ENST00000641513 MTG1Q9BT17 334 aaPredicted RBP9.57□□□□□ -0.88
PHGDH-219ENST00000641513 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.57□□□□□ -0.88
PHGDH-219ENST00000641513 UBXN6Q9BZV1 441 aa9.57□□□□□ -0.88
PHGDH-219ENST00000641513 TSGA10Q9BZW7 698 aa9.57□□□□□ -0.88
PHGDH-219ENST00000641513 FZD8Q9H461 694 aa9.57□□□□□ -0.88
PHGDH-219ENST00000641513 MINDY3Q9H8M7 445 aa9.57□□□□□ -0.88
PHGDH-219ENST00000641513 PDE11AQ9HCR9 933 aa9.57□□□□□ -0.88
PHGDH-219ENST00000641513 UBE2TQ9NPD8 197 aaPredicted RBP9.57□□□□□ -0.88
PHGDH-219ENST00000641513 XPNPEP3Q9NQH7 507 aa9.57□□□□□ -0.88
PHGDH-219ENST00000641513 ARHGAP20Q9P2F6 1191 aa9.57□□□□□ -0.88
PHGDH-219ENST00000641513 APEX2Q9UBZ4 518 aa9.57□□□□□ -0.88
PHGDH-219ENST00000641513 SRRDQ9UH36 339 aa9.57□□□□□ -0.88
PHGDH-219ENST00000641513 AJAP1Q9UKB5 411 aaPredicted RBP9.57□□□□□ -0.88
PHGDH-219ENST00000641513 THSD7BQ9C0I4 1608 aa9.56□□□□□ -0.88
PHGDH-219ENST00000641513 HAS3O00219 553 aa9.56□□□□□ -0.88
PHGDH-219ENST00000641513 ABCB7O75027 752 aa9.56□□□□□ -0.88
PHGDH-219ENST00000641513 GFPT2O94808 682 aa9.56□□□□□ -0.88
PHGDH-219ENST00000641513 LCA5LO95447 670 aa9.56□□□□□ -0.88
PHGDH-219ENST00000641513 IGHA2P01877 340 aa9.56□□□□□ -0.88
PHGDH-219ENST00000641513 FERP16591 822 aa9.56□□□□□ -0.88
PHGDH-219ENST00000641513 FGFR4P22455 802 aa9.56□□□□□ -0.88
PHGDH-219ENST00000641513 USP8P40818 1118 aa9.56□□□□□ -0.88
PHGDH-219ENST00000641513 TNFSF9P41273 254 aa9.56□□□□□ -0.88
PHGDH-219ENST00000641513 PIK3CAP42336 1068 aa9.56□□□□□ -0.88
PHGDH-219ENST00000641513 KIF11P52732 1056 aa9.56□□□□□ -0.88
PHGDH-219ENST00000641513 GJA9P57773 515 aa9.56□□□□□ -0.88
PHGDH-219ENST00000641513 CBX1P83916 185 aa9.56□□□□□ -0.88
PHGDH-219ENST00000641513 ZNF200P98182 395 aaPredicted RBP9.56□□□□□ -0.88
PHGDH-219ENST00000641513 PURAQ00577 322 aaKnown RBP9.56□□□□□ -0.88
PHGDH-219ENST00000641513 AMPD2Q01433 879 aa9.56□□□□□ -0.88
PHGDH-219ENST00000641513 CAP1Q01518 475 aa9.56□□□□□ -0.88
PHGDH-219ENST00000641513 CYP27A1Q02318 531 aa9.56□□□□□ -0.88
PHGDH-219ENST00000641513 POU5F1BQ06416 359 aa9.56□□□□□ -0.88
PHGDH-219ENST00000641513 DRAP1Q14919 205 aaPredicted RBP9.56□□□□□ -0.88
PHGDH-219ENST00000641513 ARHGEF6Q15052 776 aa9.56□□□□□ -0.88
PHGDH-219ENST00000641513 KIZQ2M2Z5 673 aa9.56□□□□□ -0.88
PHGDH-219ENST00000641513 EPC2Q52LR7 807 aa9.56□□□□□ -0.88
PHGDH-219ENST00000641513 EEF1DP3Q658K8 133 aa9.56□□□□□ -0.88
PHGDH-219ENST00000641513 DPY19L2P1Q6NXN4 242 aa9.56□□□□□ -0.88
PHGDH-219ENST00000641513 CXCL17Q6UXB2 119 aa9.56□□□□□ -0.88
PHGDH-219ENST00000641513 CRELD2Q6UXH1 353 aaPredicted RBP9.56□□□□□ -0.88
PHGDH-219ENST00000641513 RUFY4Q6ZNE9 571 aa9.56□□□□□ -0.88
PHGDH-219ENST00000641513 FBXL13Q8NEE6 735 aa9.56□□□□□ -0.88
PHGDH-219ENST00000641513 DNAJB3Q8WWF6 145 aa9.56□□□□□ -0.88
PHGDH-219ENST00000641513 JAKMIP2Q96AA8 810 aa9.56□□□□□ -0.88
PHGDH-219ENST00000641513 VTI1AQ96AJ9 217 aa9.56□□□□□ -0.88
PHGDH-219ENST00000641513 NT5C1BQ96P26 610 aa9.56□□□□□ -0.88
PHGDH-219ENST00000641513 CGRRF1Q99675 332 aa9.56□□□□□ -0.88
PHGDH-219ENST00000641513 NFKBIZQ9BYH8 718 aa9.56□□□□□ -0.88
PHGDH-219ENST00000641513 GCOM2Q9BZD3 368 aaPredicted RBP9.56□□□□□ -0.88
PHGDH-219ENST00000641513 IFT122Q9HBG6 1241 aa9.56□□□□□ -0.88
PHGDH-219ENST00000641513 PCDH10Q9P2E7 1040 aa9.56□□□□□ -0.88
PHGDH-219ENST00000641513 HDAC6Q9UBN7 1215 aa9.56□□□□□ -0.88
PHGDH-219ENST00000641513 MYO6Q9UM54 1294 aa9.56□□□□□ -0.88
PHGDH-219ENST00000641513 A0A0U1RQJ8 604 aa9.55□□□□□ -0.88
PHGDH-219ENST00000641513 SMIM35A0A1B0GVV1 85 aa9.55□□□□□ -0.88
PHGDH-219ENST00000641513 TREHO43280 583 aa9.55□□□□□ -0.88
PHGDH-219ENST00000641513 KRT86O43790 486 aa9.55□□□□□ -0.88
PHGDH-219ENST00000641513 FKTNO75072 461 aa9.55□□□□□ -0.88
PHGDH-219ENST00000641513 LRRN2O75325 713 aa9.55□□□□□ -0.88
PHGDH-219ENST00000641513 ERLIN1O75477 346 aa9.55□□□□□ -0.88
PHGDH-219ENST00000641513 HMGCRP04035 888 aa9.55□□□□□ -0.88
PHGDH-219ENST00000641513 CCDC172P0C7W6 258 aa9.55□□□□□ -0.88
PHGDH-219ENST00000641513 RFX1P22670 979 aa9.55□□□□□ -0.88
PHGDH-219ENST00000641513 SOX5P35711 763 aa9.55□□□□□ -0.88
PHGDH-219ENST00000641513 MAGEA1P43355 309 aa9.55□□□□□ -0.88
PHGDH-219ENST00000641513 JAM2P57087 298 aa9.55□□□□□ -0.88
PHGDH-219ENST00000641513 CDC42EP1Q00587 391 aa9.55□□□□□ -0.88
PHGDH-219ENST00000641513 ITIH3Q06033 890 aa9.55□□□□□ -0.88
PHGDH-219ENST00000641513 GFPT1Q06210 699 aaPredicted RBP9.55□□□□□ -0.88
PHGDH-219ENST00000641513 CKAP4Q07065 602 aaKnown RBP9.55□□□□□ -0.88
PHGDH-219ENST00000641513 ENPEPQ07075 957 aa9.55□□□□□ -0.88
PHGDH-219ENST00000641513 MCL1Q07820 350 aa9.55□□□□□ -0.88
PHGDH-219ENST00000641513 SURF1Q15526 300 aa9.55□□□□□ -0.88
PHGDH-219ENST00000641513 FAM187BQ17R55 369 aa9.55□□□□□ -0.88
PHGDH-219ENST00000641513 WDR44Q5JSH3 913 aa9.55□□□□□ -0.88
PHGDH-219ENST00000641513 PAPD7Q5XG87 772 aaKnown RBP9.55□□□□□ -0.88
PHGDH-219ENST00000641513 PHLDB3Q6NSJ2 640 aa9.55□□□□□ -0.88
PHGDH-219ENST00000641513 CC2D1AQ6P1N0 951 aaPredicted RBP9.55□□□□□ -0.88
PHGDH-219ENST00000641513 SV2AQ7L0J3 742 aa9.55□□□□□ -0.88
PHGDH-219ENST00000641513 CATSPER4Q7RTX7 472 aa9.55□□□□□ -0.88
PHGDH-219ENST00000641513 APBB1IPQ7Z5R6 666 aaPredicted RBP9.55□□□□□ -0.88
PHGDH-219ENST00000641513 ZNF410Q86VK4 478 aa9.55□□□□□ -0.88
PHGDH-219ENST00000641513 VPS36Q86VN1 386 aa9.55□□□□□ -0.88
PHGDH-219ENST00000641513 IFNLR1Q8IU57 520 aaPredicted RBP9.55□□□□□ -0.88
PHGDH-219ENST00000641513 ARHGEF19Q8IW93 802 aa9.55□□□□□ -0.88
PHGDH-219ENST00000641513 BRSK2Q8IWQ3 736 aa9.55□□□□□ -0.88
PHGDH-219ENST00000641513 PPM1KQ8N3J5 372 aa9.55□□□□□ -0.88
PHGDH-219ENST00000641513 LRRN4CLQ8ND94 238 aa9.55□□□□□ -0.88
PHGDH-219ENST00000641513 TAS1R2Q8TE23 839 aa9.55□□□□□ -0.88
PHGDH-219ENST00000641513 ATRIPQ8WXE1 791 aa9.55□□□□□ -0.88
PHGDH-219ENST00000641513 SEMA4DQ92854 862 aa9.55□□□□□ -0.88
PHGDH-219ENST00000641513 FAM84AQ96KN4 292 aa9.55□□□□□ -0.88
PHGDH-219ENST00000641513 OSMRQ99650 979 aa9.55□□□□□ -0.88
PHGDH-219ENST00000641513 ADPGKQ9BRR6 497 aa9.55□□□□□ -0.88
PHGDH-219ENST00000641513 CFHR5Q9BXR6 569 aa9.55□□□□□ -0.88
PHGDH-219ENST00000641513 STK33Q9BYT3 514 aa9.55□□□□□ -0.88
PHGDH-219ENST00000641513 UPF3AQ9H1J1 476 aaKnown RBP9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms