RNA–Protein interactions for RNA: ENST00000640748.1

ERGIC3-220, Transcript of ERGIC and golgi 3, humanhuman

TSL 5 BASIC

Gene ERGIC3, Length 832 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-220ENST00000640748 A0A1B0GTH6 734 aa13.01□□□□□ -0.33
ERGIC3-220ENST00000640748 C2orf71A6NGG8 1288 aa13.01□□□□□ -0.33
ERGIC3-220ENST00000640748 HOXA2O43364 376 aa13.01□□□□□ -0.33
ERGIC3-220ENST00000640748 TBCAO75347 108 aaKnown RBP13.01□□□□□ -0.33
ERGIC3-220ENST00000640748 CSDE1O75534 798 aaKnown RBP13.01□□□□□ -0.33
ERGIC3-220ENST00000640748 GAP43P17677 238 aa13.01□□□□□ -0.33
ERGIC3-220ENST00000640748 EEF1GP26641 437 aaKnown RBP13.01□□□□□ -0.33
ERGIC3-220ENST00000640748 PPM1AP35813 382 aa13.01□□□□□ -0.33
ERGIC3-220ENST00000640748 QARSP47897 775 aaKnown RBP13.01□□□□□ -0.33
ERGIC3-220ENST00000640748 PMS1P54277 932 aaKnown RBP13.01□□□□□ -0.33
ERGIC3-220ENST00000640748 CACNB1Q02641 598 aaPredicted RBP13.01□□□□□ -0.33
ERGIC3-220ENST00000640748 NR1I3Q14994 352 aa13.01□□□□□ -0.33
ERGIC3-220ENST00000640748 TCP11X2Q5H9J9 407 aa13.01□□□□□ -0.33
ERGIC3-220ENST00000640748 ANKRD40Q6AI12 368 aa13.01□□□□□ -0.33
ERGIC3-220ENST00000640748 RINT1Q6NUQ1 792 aa13.01□□□□□ -0.33
ERGIC3-220ENST00000640748 FOXR2Q6PJQ5 311 aa13.01□□□□□ -0.33
ERGIC3-220ENST00000640748 VSTM4Q8IW00 320 aa13.01□□□□□ -0.33
ERGIC3-220ENST00000640748 SUGP1Q8IWZ8 645 aaKnown RBP13.01□□□□□ -0.33
ERGIC3-220ENST00000640748 CSGALNACT2Q8N6G5 542 aa13.01□□□□□ -0.33
ERGIC3-220ENST00000640748 MRPL43Q8N983 215 aaKnown RBP13.01□□□□□ -0.33
ERGIC3-220ENST00000640748 CCDC150Q8NCX0 1101 aa13.01□□□□□ -0.33
ERGIC3-220ENST00000640748 PIGOQ8TEQ8 1089 aa13.01□□□□□ -0.33
ERGIC3-220ENST00000640748 DUSP9Q99956 384 aaKnown RBP13.01□□□□□ -0.33
ERGIC3-220ENST00000640748 SRRTQ9BXP5 876 aaKnown RBP13.01□□□□□ -0.33
ERGIC3-220ENST00000640748 ZHX3Q9H4I2 956 aa13.01□□□□□ -0.33
ERGIC3-220ENST00000640748 PUF60Q9UHX1 559 aaKnown RBP13.01□□□□□ -0.33
ERGIC3-220ENST00000640748 COL4A3BPQ9Y5P4 624 aa13.01□□□□□ -0.33
ERGIC3-220ENST00000640748 HCFC2Q9Y5Z7 792 aa13.01□□□□□ -0.33
ERGIC3-220ENST00000640748 ARID2Q68CP9 1835 aa13□□□□□ -0.33
ERGIC3-220ENST00000640748 ARHGEF35A5YM69 484 aa13□□□□□ -0.33
ERGIC3-220ENST00000640748 TMEM150BA6NC51 233 aa13□□□□□ -0.33
ERGIC3-220ENST00000640748 DKC1O60832 514 aaKnown RBP eCLIP13□□□□□ -0.33
ERGIC3-220ENST00000640748 CLASP2O75122 1294 aaKnown RBP13□□□□□ -0.33
ERGIC3-220ENST00000640748 FAM13AO94988 1023 aa13□□□□□ -0.33
ERGIC3-220ENST00000640748 LYPLA2O95372 231 aa13□□□□□ -0.33
ERGIC3-220ENST00000640748 PDGFBP01127 241 aaPredicted RBP13□□□□□ -0.33
ERGIC3-220ENST00000640748 TPM2P07951 284 aa13□□□□□ -0.33
ERGIC3-220ENST00000640748 ZSCAN20P17040 1043 aaPredicted RBP13□□□□□ -0.33
ERGIC3-220ENST00000640748 HOXB8P17481 243 aaPredicted RBP13□□□□□ -0.33
ERGIC3-220ENST00000640748 SP100P23497 879 aaPredicted RBP13□□□□□ -0.33
ERGIC3-220ENST00000640748 TMOD1P28289 359 aa13□□□□□ -0.33
ERGIC3-220ENST00000640748 COPB1P53618 953 aaKnown RBP13□□□□□ -0.33
ERGIC3-220ENST00000640748 PTPN5P54829 565 aa13□□□□□ -0.33
ERGIC3-220ENST00000640748 LRRC63Q05C16 580 aa13□□□□□ -0.33
ERGIC3-220ENST00000640748 RAD51AP2Q09MP3 1159 aa13□□□□□ -0.33
ERGIC3-220ENST00000640748 KRT31Q15323 416 aa13□□□□□ -0.33
ERGIC3-220ENST00000640748 C1orf186Q6ZWK4 172 aa13□□□□□ -0.33
ERGIC3-220ENST00000640748 APTXQ7Z2E3 356 aaKnown RBP13□□□□□ -0.33
ERGIC3-220ENST00000640748 TMEM173Q86WV6 379 aaPredicted RBP13□□□□□ -0.33
ERGIC3-220ENST00000640748 ABI1Q8IZP0 508 aa13□□□□□ -0.33
ERGIC3-220ENST00000640748 ZNF710Q8N1W2 664 aa13□□□□□ -0.33
ERGIC3-220ENST00000640748 RNF169Q8NCN4 708 aa13□□□□□ -0.33
ERGIC3-220ENST00000640748 FEZF2Q8TBJ5 459 aa13□□□□□ -0.33
ERGIC3-220ENST00000640748 HELQQ8TDG4 1101 aa13□□□□□ -0.33
ERGIC3-220ENST00000640748 REEP2Q9BRK0 252 aa13□□□□□ -0.33
ERGIC3-220ENST00000640748 RUSC1Q9BVN2 902 aa13□□□□□ -0.33
ERGIC3-220ENST00000640748 KCNF1Q9H3M0 494 aa13□□□□□ -0.33
ERGIC3-220ENST00000640748 RRAGDQ9NQL2 400 aaPredicted RBP13□□□□□ -0.33
ERGIC3-220ENST00000640748 NRBP2Q9NSY0 501 aa13□□□□□ -0.33
ERGIC3-220ENST00000640748 INTS13Q9NVM9 706 aa13□□□□□ -0.33
ERGIC3-220ENST00000640748 DBR1Q9UK59 544 aaKnown RBP13□□□□□ -0.33
ERGIC3-220ENST00000640748 CFAP54Q96N23 3096 aa12.99□□□□□ -0.33
ERGIC3-220ENST00000640748 IGKV6-21A0A0C4DH24 114 aa12.99□□□□□ -0.33
ERGIC3-220ENST00000640748 LRRC10BA6NIK2 292 aa12.99□□□□□ -0.33
ERGIC3-220ENST00000640748 EOMESO95936 686 aa12.99□□□□□ -0.33
ERGIC3-220ENST00000640748 SRGAP2BP0DMP2 458 aa12.99□□□□□ -0.33
ERGIC3-220ENST00000640748 PSMC5P62195 406 aa12.99□□□□□ -0.33
ERGIC3-220ENST00000640748 KRT17Q04695 432 aa12.99□□□□□ -0.33
ERGIC3-220ENST00000640748 TMC7Q7Z402 723 aa12.99□□□□□ -0.33
ERGIC3-220ENST00000640748 SFR1Q86XK3 245 aa12.99□□□□□ -0.33
ERGIC3-220ENST00000640748 CREBRFQ8IUR6 639 aa12.99□□□□□ -0.33
ERGIC3-220ENST00000640748 LRRC8AQ8IWT6 810 aa12.99□□□□□ -0.33
ERGIC3-220ENST00000640748 C4orf19Q8IY42 314 aa12.99□□□□□ -0.33
ERGIC3-220ENST00000640748 CACTINQ8WUQ7 758 aaKnown RBP12.99□□□□□ -0.33
ERGIC3-220ENST00000640748 NIFKQ9BYG3 293 aaKnown RBP12.99□□□□□ -0.33
ERGIC3-220ENST00000640748 ADAM7Q9H2U9 754 aa12.99□□□□□ -0.33
ERGIC3-220ENST00000640748 POMKQ9H5K3 350 aa12.99□□□□□ -0.33
ERGIC3-220ENST00000640748 RTN4Q9NQC3 1192 aaKnown RBP12.99□□□□□ -0.33
ERGIC3-220ENST00000640748 TBC1D7Q9P0N9 293 aa12.99□□□□□ -0.33
ERGIC3-220ENST00000640748 WRAP73Q9P2S5 460 aaPredicted RBP12.99□□□□□ -0.33
ERGIC3-220ENST00000640748 ODF2LQ9ULJ1 636 aa12.99□□□□□ -0.33
ERGIC3-220ENST00000640748 ZFHX2Q9C0A1 2572 aaPredicted RBP12.98□□□□□ -0.33
ERGIC3-220ENST00000640748 MEIS3P2A8K0S8 358 aa12.98□□□□□ -0.33
ERGIC3-220ENST00000640748 C2CD4DB7Z1M9 353 aa12.98□□□□□ -0.33
ERGIC3-220ENST00000640748 NT5C1B-RDH14C9J2C7 533 aa12.98□□□□□ -0.33
ERGIC3-220ENST00000640748 N4BP3O15049 544 aa12.98□□□□□ -0.33
ERGIC3-220ENST00000640748 NRDCO43847 1150 aa12.98□□□□□ -0.33
ERGIC3-220ENST00000640748 ZNF500O60304 480 aaPredicted RBP12.98□□□□□ -0.33
ERGIC3-220ENST00000640748 B4GALT3O60512 393 aa12.98□□□□□ -0.33
ERGIC3-220ENST00000640748 GUCY2CP25092 1073 aa12.98□□□□□ -0.33
ERGIC3-220ENST00000640748 AVPR2P30518 371 aa12.98□□□□□ -0.33
ERGIC3-220ENST00000640748 BCAR1P56945 870 aa12.98□□□□□ -0.33
ERGIC3-220ENST00000640748 TBC1D8BQ0IIM8 1120 aa12.98□□□□□ -0.33
ERGIC3-220ENST00000640748 SMC1AQ14683 1233 aaKnown RBP12.98□□□□□ -0.33
ERGIC3-220ENST00000640748 SPECC1LQ69YQ0 1117 aa12.98□□□□□ -0.33
ERGIC3-220ENST00000640748 IRF2BP1Q8IU81 584 aa12.98□□□□□ -0.33
ERGIC3-220ENST00000640748 KREMEN2Q8NCW0 462 aa12.98□□□□□ -0.33
ERGIC3-220ENST00000640748 BCL7CQ8WUZ0 217 aaPredicted RBP12.98□□□□□ -0.33
ERGIC3-220ENST00000640748 NLRP7Q8WX94 980 aa12.98□□□□□ -0.33
ERGIC3-220ENST00000640748 CASP10Q92851 521 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms