RNA–Protein interactions for RNA: ENST00000639695.1

RFC1-217, Transcript of replication factor C subunit 1, humanhuman

TSL 5 BASIC

Gene RFC1, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-217ENST00000639695 SGTAO43765 313 aa7.73□□□□□ -1.17
RFC1-217ENST00000639695 CYP2C8P10632 490 aa7.73□□□□□ -1.17
RFC1-217ENST00000639695 HK3P52790 923 aa7.73□□□□□ -1.17
RFC1-217ENST00000639695 TNFAIP2Q03169 654 aa7.73□□□□□ -1.17
RFC1-217ENST00000639695 MAN2A1Q16706 1144 aa7.73□□□□□ -1.17
RFC1-217ENST00000639695 DGKDQ16760 1214 aa7.73□□□□□ -1.17
RFC1-217ENST00000639695 SWSAP1Q6NVH7 229 aa7.73□□□□□ -1.17
RFC1-217ENST00000639695 APOA5Q6Q788 366 aa7.73□□□□□ -1.17
RFC1-217ENST00000639695 DPP8Q6V1X1 898 aaPredicted RBP7.73□□□□□ -1.17
RFC1-217ENST00000639695 TICAM2Q86XR7 235 aa7.73□□□□□ -1.17
RFC1-217ENST00000639695 NKAPQ8N5F7 415 aaKnown RBP7.73□□□□□ -1.17
RFC1-217ENST00000639695 NSUN6Q8TEA1 469 aaKnown RBP7.73□□□□□ -1.17
RFC1-217ENST00000639695 MANSC1Q9H8J5 431 aa7.73□□□□□ -1.17
RFC1-217ENST00000639695 ZNF287Q9HBT7 754 aa7.73□□□□□ -1.17
RFC1-217ENST00000639695 TDP1Q9NUW8 608 aa7.73□□□□□ -1.17
RFC1-217ENST00000639695 ST6GALNAC2Q9UJ37 374 aa7.73□□□□□ -1.17
RFC1-217ENST00000639695 CORO2BQ9UQ03 480 aa7.73□□□□□ -1.17
RFC1-217ENST00000639695 LZTS1Q9Y250 596 aa7.73□□□□□ -1.17
RFC1-217ENST00000639695 PCDHB1Q9Y5F3 818 aa7.73□□□□□ -1.17
RFC1-217ENST00000639695 A0A1W2PPL8 197 aa7.72□□□□□ -1.17
RFC1-217ENST00000639695 SUV39H1O43463 412 aa7.72□□□□□ -1.17
RFC1-217ENST00000639695 AKR1B10O60218 316 aa7.72□□□□□ -1.17
RFC1-217ENST00000639695 PHF2O75151 1096 aa7.72□□□□□ -1.17
RFC1-217ENST00000639695 ENDOD1O94919 500 aa7.72□□□□□ -1.17
RFC1-217ENST00000639695 PPM1AP35813 382 aa7.72□□□□□ -1.17
RFC1-217ENST00000639695 RENBPP51606 427 aa7.72□□□□□ -1.17
RFC1-217ENST00000639695 CASP5P51878 434 aa7.72□□□□□ -1.17
RFC1-217ENST00000639695 PPP3CAQ08209 521 aa7.72□□□□□ -1.17
RFC1-217ENST00000639695 MGAT5Q09328 741 aa7.72□□□□□ -1.17
RFC1-217ENST00000639695 NOGQ13253 232 aa7.72□□□□□ -1.17
RFC1-217ENST00000639695 FAM209BQ5JX69 171 aa7.72□□□□□ -1.17
RFC1-217ENST00000639695 LIMS2Q7Z4I7 341 aa7.72□□□□□ -1.17
RFC1-217ENST00000639695 TTC9BQ8N6N2 239 aa7.72□□□□□ -1.17
RFC1-217ENST00000639695 CLPTM1LQ96KA5 538 aa7.72□□□□□ -1.17
RFC1-217ENST00000639695 C22orf23Q9BZE7 217 aa7.72□□□□□ -1.17
RFC1-217ENST00000639695 LMBRD1Q9NUN5 540 aa7.72□□□□□ -1.17
RFC1-217ENST00000639695 OGDHLQ9ULD0 1010 aa7.72□□□□□ -1.17
RFC1-217ENST00000639695 RPTORQ8N122 1335 aa7.72□□□□□ -1.17
RFC1-217ENST00000639695 MAFO75444 373 aaPredicted RBP7.71□□□□□ -1.18
RFC1-217ENST00000639695 RPL13P26373 211 aaKnown RBP7.71□□□□□ -1.18
RFC1-217ENST00000639695 STAT5AP42229 794 aa7.71□□□□□ -1.18
RFC1-217ENST00000639695 STT3AP46977 705 aa7.71□□□□□ -1.18
RFC1-217ENST00000639695 CDC42EP1Q00587 391 aa7.71□□□□□ -1.18
RFC1-217ENST00000639695 MEF2AQ02078 507 aaPredicted RBP7.71□□□□□ -1.18
RFC1-217ENST00000639695 SKIDA1Q1XH10 827 aa7.71□□□□□ -1.18
RFC1-217ENST00000639695 CCDC174Q6PII3 467 aa7.71□□□□□ -1.18
RFC1-217ENST00000639695 RSPH3Q86UC2 560 aa7.71□□□□□ -1.18
RFC1-217ENST00000639695 Q8N1X5 172 aa7.71□□□□□ -1.18
RFC1-217ENST00000639695 TEX19Q8NA77 164 aa7.71□□□□□ -1.18
RFC1-217ENST00000639695 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.71□□□□□ -1.18
RFC1-217ENST00000639695 ATXN2LQ8WWM7 1075 aaKnown RBP7.71□□□□□ -1.18
RFC1-217ENST00000639695 SLC35A4Q96G79 324 aa7.71□□□□□ -1.18
RFC1-217ENST00000639695 DYDC2Q96IM9 177 aa7.71□□□□□ -1.18
RFC1-217ENST00000639695 PNPLA8Q9NP80 782 aa7.71□□□□□ -1.18
RFC1-217ENST00000639695 CNNM1Q9NRU3 951 aa7.71□□□□□ -1.18
RFC1-217ENST00000639695 GPRC5BQ9NZH0 403 aa7.71□□□□□ -1.18
RFC1-217ENST00000639695 ARHGAP20Q9P2F6 1191 aa7.71□□□□□ -1.18
RFC1-217ENST00000639695 ZNF69Q9UC07 566 aa7.71□□□□□ -1.18
RFC1-217ENST00000639695 DGKBQ9Y6T7 804 aa7.71□□□□□ -1.18
RFC1-217ENST00000639695 ISM1B1AKI9 464 aa7.7□□□□□ -1.18
RFC1-217ENST00000639695 DDX3XO00571 662 aaKnown RBP eCLIP7.7□□□□□ -1.18
RFC1-217ENST00000639695 SEC24DO94855 1032 aaPredicted RBP7.7□□□□□ -1.18
RFC1-217ENST00000639695 ABCB4P21439 1286 aa7.7□□□□□ -1.18
RFC1-217ENST00000639695 SMARCA1P28370 1054 aa7.7□□□□□ -1.18
RFC1-217ENST00000639695 CHKAP35790 457 aa7.7□□□□□ -1.18
RFC1-217ENST00000639695 TECP42680 631 aa7.7□□□□□ -1.18
RFC1-217ENST00000639695 GRK6P43250 576 aa7.7□□□□□ -1.18
RFC1-217ENST00000639695 ZNF543Q08ER8 600 aa7.7□□□□□ -1.18
RFC1-217ENST00000639695 CDSNQ15517 529 aa7.7□□□□□ -1.18
RFC1-217ENST00000639695 ELF2Q15723 593 aa7.7□□□□□ -1.18
RFC1-217ENST00000639695 WDR78Q5VTH9 848 aa7.7□□□□□ -1.18
RFC1-217ENST00000639695 SPTY2D1Q68D10 685 aaPredicted RBP7.7□□□□□ -1.18
RFC1-217ENST00000639695 MCTP2Q6DN12 878 aa7.7□□□□□ -1.18
RFC1-217ENST00000639695 CD300LDQ6UXZ3 194 aa7.7□□□□□ -1.18
RFC1-217ENST00000639695 CXXC5Q7LFL8 322 aaKnown RBP7.7□□□□□ -1.18
RFC1-217ENST00000639695 HEATR3Q7Z4Q2 680 aa7.7□□□□□ -1.18
RFC1-217ENST00000639695 SPRED1Q7Z699 444 aa7.7□□□□□ -1.18
RFC1-217ENST00000639695 OR5AN1Q8NGI8 311 aa7.7□□□□□ -1.18
RFC1-217ENST00000639695 PLBD2Q8NHP8 589 aa7.7□□□□□ -1.18
RFC1-217ENST00000639695 BRI3BPQ8WY22 251 aa7.7□□□□□ -1.18
RFC1-217ENST00000639695 ARL8AQ96BM9 186 aa7.7□□□□□ -1.18
RFC1-217ENST00000639695 ZC3H10Q96K80 434 aaKnown RBP7.7□□□□□ -1.18
RFC1-217ENST00000639695 KRTAP9-8Q9BYQ0 159 aa7.7□□□□□ -1.18
RFC1-217ENST00000639695 UNKQ9C0B0 810 aaKnown RBP7.7□□□□□ -1.18
RFC1-217ENST00000639695 ZMAT3Q9HA38 289 aaKnown RBP7.7□□□□□ -1.18
RFC1-217ENST00000639695 DLL4Q9NR61 685 aa7.7□□□□□ -1.18
RFC1-217ENST00000639695 PNPOQ9NVS9 261 aa7.7□□□□□ -1.18
RFC1-217ENST00000639695 FSBPO95073 299 aa7.69□□□□□ -1.18
RFC1-217ENST00000639695 MAPK10P53779 464 aa7.69□□□□□ -1.18
RFC1-217ENST00000639695 NKX6-1P78426 367 aaPredicted RBP7.69□□□□□ -1.18
RFC1-217ENST00000639695 STILQ15468 1287 aa7.69□□□□□ -1.18
RFC1-217ENST00000639695 CR1LQ2VPA4 569 aa7.69□□□□□ -1.18
RFC1-217ENST00000639695 PRR31Q5SQ13 230 aa7.69□□□□□ -1.18
RFC1-217ENST00000639695 PGBD2Q6P3X8 592 aa7.69□□□□□ -1.18
RFC1-217ENST00000639695 PROSER1Q86XN7 944 aa7.69□□□□□ -1.18
RFC1-217ENST00000639695 OR2I1PQ8NGU4 316 aa7.69□□□□□ -1.18
RFC1-217ENST00000639695 ANKS1AQ92625 1134 aa7.69□□□□□ -1.18
RFC1-217ENST00000639695 CYFIP2Q96F07 1278 aa7.69□□□□□ -1.18
RFC1-217ENST00000639695 SUCLG2Q96I99 432 aa7.69□□□□□ -1.18
RFC1-217ENST00000639695 NT5C1BQ96P26 610 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms