RNA–Protein interactions for RNA: ENST00000639561.1

ATRIP-208, Transcript of ATR interacting protein, humanhuman

TSL 2

Gene ATRIP, Length 2,376 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRIP-208ENST00000639561 SMPD1P17405 629 aa14.98□□□□□ -0.01
ATRIP-208ENST00000639561 SNRNP35Q16560 246 aaKnown RBP14.98□□□□□ -0.01
ATRIP-208ENST00000639561 FSCN1Q16658 493 aaKnown RBP14.98□□□□□ -0.01
ATRIP-208ENST00000639561 MIS18BP1Q6P0N0 1132 aa14.98□□□□□ -0.01
ATRIP-208ENST00000639561 WDR93Q6P2C0 686 aa14.98□□□□□ -0.01
ATRIP-208ENST00000639561 SEPT14Q6ZU15 432 aa14.98□□□□□ -0.01
ATRIP-208ENST00000639561 ARHGEF19Q8IW93 802 aa14.98□□□□□ -0.01
ATRIP-208ENST00000639561 SLC30A5Q8TAD4 765 aa14.98□□□□□ -0.01
ATRIP-208ENST00000639561 HVCN1Q96D96 273 aa14.98□□□□□ -0.01
ATRIP-208ENST00000639561 SEZ6LQ9BYH1 1024 aa14.98□□□□□ -0.01
ATRIP-208ENST00000639561 SUGCTQ9HAC7 445 aa14.98□□□□□ -0.01
ATRIP-208ENST00000639561 C17orf75Q9HAS0 396 aa14.98□□□□□ -0.01
ATRIP-208ENST00000639561 ARHGAP44Q17R89 818 aa14.97□□□□□ -0.01
ATRIP-208ENST00000639561 TAS1R3Q7RTX0 852 aa14.97□□□□□ -0.01
ATRIP-208ENST00000639561 GLYCTKQ8IVS8 523 aa14.97□□□□□ -0.01
ATRIP-208ENST00000639561 MCPH1Q8NEM0 835 aa14.97□□□□□ -0.01
ATRIP-208ENST00000639561 TMEM117Q9H0C3 514 aa14.97□□□□□ -0.01
ATRIP-208ENST00000639561 ATP6V0A4Q9HBG4 840 aa14.97□□□□□ -0.01
ATRIP-208ENST00000639561 TMEM39AQ9NV64 488 aa14.97□□□□□ -0.01
ATRIP-208ENST00000639561 PACSIN2Q9UNF0 486 aaPredicted RBP14.97□□□□□ -0.01
ATRIP-208ENST00000639561 EXOC7Q9UPT5 735 aa14.97□□□□□ -0.01
ATRIP-208ENST00000639561 MAFBQ9Y5Q3 323 aaPredicted RBP14.97□□□□□ -0.01
ATRIP-208ENST00000639561 TRIM43BA6NCK2 446 aa14.97□□□□□ -0.01
ATRIP-208ENST00000639561 FOXN3O00409 490 aaPredicted RBP14.97□□□□□ -0.01
ATRIP-208ENST00000639561 TLR3O15455 904 aaKnown RBP14.97□□□□□ -0.01
ATRIP-208ENST00000639561 ATG7O95352 703 aa14.97□□□□□ -0.01
ATRIP-208ENST00000639561 UBA1P22314 1058 aaKnown RBP14.97□□□□□ -0.01
ATRIP-208ENST00000639561 EDNRBP24530 442 aa14.97□□□□□ -0.01
ATRIP-208ENST00000639561 MCCD1P59942 119 aaPredicted RBP14.97□□□□□ -0.01
ATRIP-208ENST00000639561 MTERF2Q49AM1 385 aa14.97□□□□□ -0.01
ATRIP-208ENST00000639561 DUSP28Q4G0W2 176 aa14.97□□□□□ -0.01
ATRIP-208ENST00000639561 XKR3Q5GH77 459 aa14.97□□□□□ -0.01
ATRIP-208ENST00000639561 MEI1Q5TIA1 1274 aa14.97□□□□□ -0.01
ATRIP-208ENST00000639561 VPS36Q86VN1 386 aa14.97□□□□□ -0.01
ATRIP-208ENST00000639561 SPATA4Q8NEY3 305 aa14.97□□□□□ -0.01
ATRIP-208ENST00000639561 BADQ92934 168 aa14.97□□□□□ -0.01
ATRIP-208ENST00000639561 TRIM43Q96BQ3 446 aaPredicted RBP14.97□□□□□ -0.01
ATRIP-208ENST00000639561 LRCH3Q96II8 777 aa14.97□□□□□ -0.01
ATRIP-208ENST00000639561 GOLPH3Q9H4A6 298 aa14.97□□□□□ -0.01
ATRIP-208ENST00000639561 PDGFCQ9NRA1 345 aa14.97□□□□□ -0.01
ATRIP-208ENST00000639561 RBM47A0AV96 593 aaKnown RBP14.96□□□□□ -0.01
ATRIP-208ENST00000639561 ARVCFO00192 962 aa14.96□□□□□ -0.01
ATRIP-208ENST00000639561 P4HA2O15460 535 aa14.96□□□□□ -0.01
ATRIP-208ENST00000639561 DYNC1LI2O43237 492 aaPredicted RBP14.96□□□□□ -0.01
ATRIP-208ENST00000639561 RAG1P15918 1043 aa14.96□□□□□ -0.01
ATRIP-208ENST00000639561 MXI1P50539 228 aa14.96□□□□□ -0.01
ATRIP-208ENST00000639561 DNA2P51530 1060 aa14.96□□□□□ -0.01
ATRIP-208ENST00000639561 MS4A14Q96JA4 679 aa14.96□□□□□ -0.01
ATRIP-208ENST00000639561 POLR3FQ9H1D9 316 aaPredicted RBP14.96□□□□□ -0.01
ATRIP-208ENST00000639561 MAP2K7O14733 419 aa14.96□□□□□ -0.02
ATRIP-208ENST00000639561 N4BP1O75113 896 aaKnown RBP14.96□□□□□ -0.02
ATRIP-208ENST00000639561 RFX1P22670 979 aa14.96□□□□□ -0.02
ATRIP-208ENST00000639561 BEX3Q00994 111 aa14.96□□□□□ -0.02
ATRIP-208ENST00000639561 ITIH3Q06033 890 aa14.96□□□□□ -0.02
ATRIP-208ENST00000639561 PALB2Q86YC2 1186 aa14.96□□□□□ -0.02
ATRIP-208ENST00000639561 LRRC57Q8N9N7 239 aa14.96□□□□□ -0.02
ATRIP-208ENST00000639561 SCFD2Q8WU76 684 aa14.96□□□□□ -0.02
ATRIP-208ENST00000639561 KAT5Q92993 513 aa14.96□□□□□ -0.02
ATRIP-208ENST00000639561 CCDC127Q96BQ5 260 aa14.96□□□□□ -0.02
ATRIP-208ENST00000639561 UBE2TQ9NPD8 197 aaPredicted RBP14.96□□□□□ -0.02
ATRIP-208ENST00000639561 ZNF302Q9NR11 478 aa14.96□□□□□ -0.02
ATRIP-208ENST00000639561 ARHGAP28Q9P2N2 729 aa14.96□□□□□ -0.02
ATRIP-208ENST00000639561 L1RE1Q9UN81 338 aa14.96□□□□□ -0.02
ATRIP-208ENST00000639561 ATP8B3O60423 1300 aa14.96□□□□□ -0.02
ATRIP-208ENST00000639561 OATP04181 439 aa14.95□□□□□ -0.02
ATRIP-208ENST00000639561 CDK7P50613 346 aa14.95□□□□□ -0.02
ATRIP-208ENST00000639561 IRX5P78411 483 aaPredicted RBP14.95□□□□□ -0.02
ATRIP-208ENST00000639561 FAAP100Q0VG06 881 aa14.95□□□□□ -0.02
ATRIP-208ENST00000639561 EMC2Q15006 297 aa14.95□□□□□ -0.02
ATRIP-208ENST00000639561 PARD3BQ8TEW8 1205 aa14.95□□□□□ -0.02
ATRIP-208ENST00000639561 FBXL18Q96ME1 805 aa14.95□□□□□ -0.02
ATRIP-208ENST00000639561 POP1Q99575 1024 aaKnown RBP14.95□□□□□ -0.02
ATRIP-208ENST00000639561 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.95□□□□□ -0.02
ATRIP-208ENST00000639561 DAAM1Q9Y4D1 1078 aa14.95□□□□□ -0.02
ATRIP-208ENST00000639561 IGKV6D-21A0A0A0MT36 114 aa14.95□□□□□ -0.02
ATRIP-208ENST00000639561 TARSL2A2RTX5 802 aaKnown RBP14.95□□□□□ -0.02
ATRIP-208ENST00000639561 LRRIQ3A6PVS8 624 aaPredicted RBP14.95□□□□□ -0.02
ATRIP-208ENST00000639561 HNRNPDLO14979 420 aaKnown RBP14.95□□□□□ -0.02
ATRIP-208ENST00000639561 PMM2O15305 246 aa14.95□□□□□ -0.02
ATRIP-208ENST00000639561 ZMYND10O75800 440 aa14.95□□□□□ -0.02
ATRIP-208ENST00000639561 TUBBP07437 444 aa14.95□□□□□ -0.02
ATRIP-208ENST00000639561 H2AFZP0C0S5 128 aa14.95□□□□□ -0.02
ATRIP-208ENST00000639561 CPT1AP50416 773 aa14.95□□□□□ -0.02
ATRIP-208ENST00000639561 CETN1Q12798 172 aa14.95□□□□□ -0.02
ATRIP-208ENST00000639561 BRDTQ58F21 947 aaPredicted RBP14.95□□□□□ -0.02
ATRIP-208ENST00000639561 H2AFVQ71UI9 128 aa14.95□□□□□ -0.02
ATRIP-208ENST00000639561 SEMA4DQ92854 862 aa14.95□□□□□ -0.02
ATRIP-208ENST00000639561 PCYT2Q99447 389 aa14.95□□□□□ -0.02
ATRIP-208ENST00000639561 UBXN6Q9BZV1 441 aa14.95□□□□□ -0.02
ATRIP-208ENST00000639561 TOPORSQ9NS56 1045 aaPredicted RBP14.95□□□□□ -0.02
ATRIP-208ENST00000639561 FAM170AA1A519 330 aa14.94□□□□□ -0.02
ATRIP-208ENST00000639561 ERLIN1O75477 346 aa14.94□□□□□ -0.02
ATRIP-208ENST00000639561 POLGP54098 1239 aaPredicted RBP14.94□□□□□ -0.02
ATRIP-208ENST00000639561 GALCP54803 685 aa14.94□□□□□ -0.02
ATRIP-208ENST00000639561 CXCL17Q6UXB2 119 aa14.94□□□□□ -0.02
ATRIP-208ENST00000639561 MMGT1Q8N4V1 131 aa14.94□□□□□ -0.02
ATRIP-208ENST00000639561 HDAC7Q8WUI4 952 aa14.94□□□□□ -0.02
ATRIP-208ENST00000639561 POMGNT1Q8WZA1 660 aa14.94□□□□□ -0.02
ATRIP-208ENST00000639561 TMEM143Q96AN5 459 aa14.94□□□□□ -0.02
ATRIP-208ENST00000639561 CEP89Q96ST8 783 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms