RNA–Protein interactions for RNA: ENST00000638663.1

SCARB2-212, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 1,922 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-212ENST00000638663 KIZQ2M2Z5 673 aa23.44■■□□□ 1.34
SCARB2-212ENST00000638663 HELQQ8TDG4 1101 aa23.44■■□□□ 1.34
SCARB2-212ENST00000638663 CPB2Q96IY4 423 aa23.44■■□□□ 1.34
SCARB2-212ENST00000638663 KREMEN1Q96MU8 473 aa23.44■■□□□ 1.34
SCARB2-212ENST00000638663 MACROD2A1Z1Q3 448 aa23.43■■□□□ 1.34
SCARB2-212ENST00000638663 MBLAC1A4D2B0 266 aaPredicted RBP23.43■■□□□ 1.34
SCARB2-212ENST00000638663 RUFY4Q6ZNE9 571 aa23.43■■□□□ 1.34
SCARB2-212ENST00000638663 ZNF410Q86VK4 478 aa23.43■■□□□ 1.34
SCARB2-212ENST00000638663 FMNL3Q8IVF7 1028 aa23.43■■□□□ 1.34
SCARB2-212ENST00000638663 CEP120Q8N960 986 aa23.43■■□□□ 1.34
SCARB2-212ENST00000638663 OR5B17Q8NGF7 314 aa23.43■■□□□ 1.34
SCARB2-212ENST00000638663 TATDN2Q93075 761 aa23.43■■□□□ 1.34
SCARB2-212ENST00000638663 VTI1AQ96AJ9 217 aa23.43■■□□□ 1.34
SCARB2-212ENST00000638663 RNF186Q9NXI6 227 aa23.43■■□□□ 1.34
SCARB2-212ENST00000638663 GINS2Q9Y248 185 aa23.43■■□□□ 1.34
SCARB2-212ENST00000638663 HLA-DRAP01903 254 aa23.43■■□□□ 1.34
SCARB2-212ENST00000638663 CCDC172P0C7W6 258 aa23.43■■□□□ 1.34
SCARB2-212ENST00000638663 PIK3CAP42336 1068 aa23.43■■□□□ 1.34
SCARB2-212ENST00000638663 MFAP3P55082 362 aa23.43■■□□□ 1.34
SCARB2-212ENST00000638663 VPS36Q86VN1 386 aa23.43■■□□□ 1.34
SCARB2-212ENST00000638663 KATNAL1Q9BW62 490 aa23.43■■□□□ 1.34
SCARB2-212ENST00000638663 VNN1O95497 513 aa23.42■■□□□ 1.34
SCARB2-212ENST00000638663 ARF4P18085 180 aaPredicted RBP23.42■■□□□ 1.34
SCARB2-212ENST00000638663 USP8P40818 1118 aa23.42■■□□□ 1.34
SCARB2-212ENST00000638663 ZNF200P98182 395 aaPredicted RBP23.42■■□□□ 1.34
SCARB2-212ENST00000638663 CACNB2Q08289 660 aaPredicted RBP23.42■■□□□ 1.34
SCARB2-212ENST00000638663 GNASQ5JWF2 1037 aa23.42■■□□□ 1.34
SCARB2-212ENST00000638663 ADAMTS10Q9H324 1103 aa23.42■■□□□ 1.34
SCARB2-212ENST00000638663 PDZD7Q9H5P4 517 aa23.42■■□□□ 1.34
SCARB2-212ENST00000638663 L2HGDHQ9H9P8 463 aa23.42■■□□□ 1.34
SCARB2-212ENST00000638663 LUC7LQ9NQ29 371 aaKnown RBP23.42■■□□□ 1.34
SCARB2-212ENST00000638663 SMIM35A0A1B0GVV1 85 aa23.41■■□□□ 1.34
SCARB2-212ENST00000638663 GPR25O00155 361 aa23.41■■□□□ 1.34
SCARB2-212ENST00000638663 TREHO43280 583 aa23.41■■□□□ 1.34
SCARB2-212ENST00000638663 PGK1P00558 417 aa23.41■■□□□ 1.34
SCARB2-212ENST00000638663 ELNP15502 786 aa23.41■■□□□ 1.34
SCARB2-212ENST00000638663 GJA9P57773 515 aa23.41■■□□□ 1.34
SCARB2-212ENST00000638663 ADAM17P78536 824 aa23.41■■□□□ 1.34
SCARB2-212ENST00000638663 SRGAP1Q7Z6B7 1085 aa23.41■■□□□ 1.34
SCARB2-212ENST00000638663 PJA2O43164 708 aa23.41■■□□□ 1.34
SCARB2-212ENST00000638663 TSPAN1O60635 241 aa23.41■■□□□ 1.34
SCARB2-212ENST00000638663 ERLIN2O94905 339 aa23.41■■□□□ 1.34
SCARB2-212ENST00000638663 FGFR4P22455 802 aa23.41■■□□□ 1.34
SCARB2-212ENST00000638663 ANXA13P27216 316 aa23.41■■□□□ 1.34
SCARB2-212ENST00000638663 TXLNBQ8N3L3 684 aa23.41■■□□□ 1.34
SCARB2-212ENST00000638663 SECISBP2LQ93073 1101 aaKnown RBP23.41■■□□□ 1.34
SCARB2-212ENST00000638663 HDAC6Q9UBN7 1215 aa23.41■■□□□ 1.34
SCARB2-212ENST00000638663 NAGPAQ9UK23 515 aa23.41■■□□□ 1.34
SCARB2-212ENST00000638663 C17orf102A2RUQ5 167 aa23.4■■□□□ 1.34
SCARB2-212ENST00000638663 DDX3XO00571 662 aaKnown RBP eCLIP23.4■■□□□ 1.343e-14■■■■■ 29.4
SCARB2-212ENST00000638663 SEPT4O43236 478 aa23.4■■□□□ 1.34
SCARB2-212ENST00000638663 ZC3H11AO75152 810 aaKnown RBP eCLIP23.4■■□□□ 1.34
SCARB2-212ENST00000638663 PHACTR2O75167 634 aa23.4■■□□□ 1.34
SCARB2-212ENST00000638663 GPR32O75388 356 aa23.4■■□□□ 1.34
SCARB2-212ENST00000638663 WDR44Q5JSH3 913 aa23.4■■□□□ 1.34
SCARB2-212ENST00000638663 ALKBH5Q6P6C2 394 aaKnown RBP23.4■■□□□ 1.34
SCARB2-212ENST00000638663 WDR49Q8IV35 697 aa23.4■■□□□ 1.34
SCARB2-212ENST00000638663 TMEM192Q8IY95 271 aa23.4■■□□□ 1.34
SCARB2-212ENST00000638663 C7orf31Q8N865 590 aa23.4■■□□□ 1.34
SCARB2-212ENST00000638663 DNAJB3Q8WWF6 145 aa23.4■■□□□ 1.34
SCARB2-212ENST00000638663 SHC3Q92529 594 aa23.4■■□□□ 1.34
SCARB2-212ENST00000638663 PACSIN1Q9BY11 444 aa23.4■■□□□ 1.34
SCARB2-212ENST00000638663 CDHR5Q9HBB8 845 aa23.4■■□□□ 1.34
SCARB2-212ENST00000638663 C1orf112Q9NSG2 853 aa23.4■■□□□ 1.34
SCARB2-212ENST00000638663 CTAGE9A4FU28 777 aa23.39■■□□□ 1.34
SCARB2-212ENST00000638663 RARBP10826 455 aa23.39■■□□□ 1.34
SCARB2-212ENST00000638663 MCF2P10911 925 aa23.39■■□□□ 1.34
SCARB2-212ENST00000638663 BMS1Q14692 1282 aaKnown RBP23.39■■□□□ 1.34
SCARB2-212ENST00000638663 GLYCTKQ8IVS8 523 aa23.39■■□□□ 1.34
SCARB2-212ENST00000638663 OLIG1Q8TAK6 271 aa23.39■■□□□ 1.34
SCARB2-212ENST00000638663 LNX1Q8TBB1 728 aaPredicted RBP23.39■■□□□ 1.34
SCARB2-212ENST00000638663 CD99L2Q8TCZ2 262 aa23.39■■□□□ 1.34
SCARB2-212ENST00000638663 GCOM2Q9BZD3 368 aaPredicted RBP23.39■■□□□ 1.34
SCARB2-212ENST00000638663 PCNTO95613 3336 aa23.39■■□□□ 1.33
SCARB2-212ENST00000638663 SURF1Q15526 300 aa23.39■■□□□ 1.33
SCARB2-212ENST00000638663 NAB2Q15742 525 aa23.39■■□□□ 1.33
SCARB2-212ENST00000638663 SPOPLQ6IQ16 392 aa23.39■■□□□ 1.33
SCARB2-212ENST00000638663 FAM71AQ8IYT1 594 aa23.39■■□□□ 1.33
SCARB2-212ENST00000638663 U2AF1L4Q8WU68 220 aaKnown RBP23.39■■□□□ 1.33
SCARB2-212ENST00000638663 OSMRQ99650 979 aa23.39■■□□□ 1.33
SCARB2-212ENST00000638663 NAPGQ99747 312 aaPredicted RBP23.39■■□□□ 1.33
SCARB2-212ENST00000638663 SYT11Q9BT88 431 aa23.39■■□□□ 1.33
SCARB2-212ENST00000638663 UPF3AQ9H1J1 476 aaKnown RBP23.39■■□□□ 1.33
SCARB2-212ENST00000638663 RPF1Q9H9Y2 349 aaKnown RBP23.39■■□□□ 1.33
SCARB2-212ENST00000638663 SPC25Q9HBM1 224 aa23.39■■□□□ 1.33
SCARB2-212ENST00000638663 KPNA6O60684 536 aa23.38■■□□□ 1.33
SCARB2-212ENST00000638663 STAG3L1P0CL83 205 aa23.38■■□□□ 1.33
SCARB2-212ENST00000638663 CXCL8P10145 99 aa23.38■■□□□ 1.33
SCARB2-212ENST00000638663 PRKAR2AP13861 404 aaKnown RBP23.38■■□□□ 1.33
SCARB2-212ENST00000638663 CCND3P30281 292 aaPredicted RBP23.38■■□□□ 1.33
SCARB2-212ENST00000638663 AP3M2P53677 418 aa23.38■■□□□ 1.33
SCARB2-212ENST00000638663 CDC42EP1Q00587 391 aa23.38■■□□□ 1.33
SCARB2-212ENST00000638663 GCNT1Q02742 428 aa23.38■■□□□ 1.33
SCARB2-212ENST00000638663 CXCL17Q6UXB2 119 aa23.38■■□□□ 1.33
SCARB2-212ENST00000638663 DNAAF5Q86Y56 855 aa23.38■■□□□ 1.33
SCARB2-212ENST00000638663 SLC20A1Q8WUM9 679 aa23.38■■□□□ 1.33
SCARB2-212ENST00000638663 DHX38Q92620 1227 aaKnown RBP23.38■■□□□ 1.33
SCARB2-212ENST00000638663 CFHR5Q9BXR6 569 aa23.38■■□□□ 1.33
SCARB2-212ENST00000638663 MTMR12Q9C0I1 747 aa23.38■■□□□ 1.33
SCARB2-212ENST00000638663 SALL4Q9UJQ4 1053 aa23.38■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms