RNA–Protein interactions for RNA: ENST00000638372.1

SCARB2-208, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-208ENST00000638372 CBWD2Q8IUF1 395 aa15.22■□□□□ 0.03
SCARB2-208ENST00000638372 CALR3Q96L12 384 aaKnown RBP15.22■□□□□ 0.03
SCARB2-208ENST00000638372 SPON1Q9HCB6 807 aa15.22■□□□□ 0.03
SCARB2-208ENST00000638372 KCNQ5Q9NR82 932 aa15.22■□□□□ 0.03
SCARB2-208ENST00000638372 DCTN4Q9UJW0 460 aa15.22■□□□□ 0.03
SCARB2-208ENST00000638372 KRT38O76015 456 aa15.22■□□□□ 0.03
SCARB2-208ENST00000638372 ESRRAP11474 423 aaPredicted RBP15.22■□□□□ 0.03
SCARB2-208ENST00000638372 AP3M2P53677 418 aa15.22■□□□□ 0.03
SCARB2-208ENST00000638372 C2CD6Q53TS8 623 aa15.22■□□□□ 0.03
SCARB2-208ENST00000638372 ATL2Q8NHH9 583 aa15.22■□□□□ 0.03
SCARB2-208ENST00000638372 NUDT12Q9BQG2 462 aa15.22■□□□□ 0.03
SCARB2-208ENST00000638372 SMARCAD1Q9H4L7 1026 aa15.22■□□□□ 0.03
SCARB2-208ENST00000638372 MAFGO15525 162 aa15.22■□□□□ 0.03
SCARB2-208ENST00000638372 CXCL9Q07325 125 aa15.22■□□□□ 0.03
SCARB2-208ENST00000638372 KCNV1Q6PIU1 500 aa15.22■□□□□ 0.03
SCARB2-208ENST00000638372 PTF1AQ7RTS3 328 aa15.22■□□□□ 0.03
SCARB2-208ENST00000638372 SCFD1Q8WVM8 642 aa15.22■□□□□ 0.03
SCARB2-208ENST00000638372 MOCS2O96007 188 aaPredicted RBP15.21■□□□□ 0.03
SCARB2-208ENST00000638372 LCP1P13796 627 aa15.21■□□□□ 0.03
SCARB2-208ENST00000638372 PDGFRAP16234 1089 aa15.21■□□□□ 0.03
SCARB2-208ENST00000638372 ACTR2P61160 394 aa15.21■□□□□ 0.03
SCARB2-208ENST00000638372 TMEM8AQ9HCN3 771 aa15.21■□□□□ 0.03
SCARB2-208ENST00000638372 INTUQ9ULD6 942 aa15.21■□□□□ 0.03
SCARB2-208ENST00000638372 TMX2Q9Y320 296 aa15.21■□□□□ 0.03
SCARB2-208ENST00000638372 ATP8B3O60423 1300 aa15.21■□□□□ 0.03
SCARB2-208ENST00000638372 EPHB1P54762 984 aa15.21■□□□□ 0.03
SCARB2-208ENST00000638372 DNAAF5Q86Y56 855 aa15.21■□□□□ 0.03
SCARB2-208ENST00000638372 OR6J1Q8NGC5 347 aa15.21■□□□□ 0.03
SCARB2-208ENST00000638372 MCEEQ96PE7 176 aa15.21■□□□□ 0.03
SCARB2-208ENST00000638372 VPS11Q9H270 941 aa15.21■□□□□ 0.03
SCARB2-208ENST00000638372 IGSF9BQ9UPX0 1349 aa15.21■□□□□ 0.03
SCARB2-208ENST00000638372 FRMD3A2A2Y4 597 aa15.21■□□□□ 0.03
SCARB2-208ENST00000638372 AKAP3O75969 853 aa15.21■□□□□ 0.03
SCARB2-208ENST00000638372 PON1P27169 355 aa15.21■□□□□ 0.03
SCARB2-208ENST00000638372 SLC12A1Q13621 1099 aa15.21■□□□□ 0.03
SCARB2-208ENST00000638372 DNAJC7Q99615 494 aa15.21■□□□□ 0.03
SCARB2-208ENST00000638372 L2HGDHQ9H9P8 463 aa15.21■□□□□ 0.03
SCARB2-208ENST00000638372 KIAA0391O15091 583 aaKnown RBP15.2■□□□□ 0.02
SCARB2-208ENST00000638372 SPAG7O75391 227 aa15.2■□□□□ 0.02
SCARB2-208ENST00000638372 PDGFRBP09619 1106 aa15.2■□□□□ 0.02
SCARB2-208ENST00000638372 PMLP29590 882 aa15.2■□□□□ 0.02
SCARB2-208ENST00000638372 ANKMY2Q8IV38 441 aa15.2■□□□□ 0.02
SCARB2-208ENST00000638372 NCAPGQ9BPX3 1015 aa15.2■□□□□ 0.02
SCARB2-208ENST00000638372 ANKEF1Q9NU02 776 aa15.2■□□□□ 0.02
SCARB2-208ENST00000638372 TNPO2O14787 897 aaKnown RBP15.2■□□□□ 0.02
SCARB2-208ENST00000638372 SLC26A4O43511 780 aa15.2■□□□□ 0.02
SCARB2-208ENST00000638372 TMEM253P0C7T8 217 aa15.2■□□□□ 0.02
SCARB2-208ENST00000638372 ARHGEF6Q15052 776 aa15.2■□□□□ 0.02
SCARB2-208ENST00000638372 ZFPM1Q8IX07 1006 aa15.2■□□□□ 0.02
SCARB2-208ENST00000638372 EXT2Q93063 718 aa15.2■□□□□ 0.02
SCARB2-208ENST00000638372 GMCL1Q96IK5 515 aa15.2■□□□□ 0.02
SCARB2-208ENST00000638372 PACSIN1Q9BY11 444 aa15.2■□□□□ 0.02
SCARB2-208ENST00000638372 SLC13A1Q9BZW2 595 aa15.2■□□□□ 0.02
SCARB2-208ENST00000638372 CYP26B1Q9NR63 512 aa15.2■□□□□ 0.02
SCARB2-208ENST00000638372 TXLNGQ9NUQ3 528 aa15.2■□□□□ 0.02
SCARB2-208ENST00000638372 PPARGC1AQ9UBK2 798 aaKnown RBP15.2■□□□□ 0.02
SCARB2-208ENST00000638372 MAPK13O15264 365 aa15.2■□□□□ 0.02
SCARB2-208ENST00000638372 ROR1Q01973 937 aa15.2■□□□□ 0.02
SCARB2-208ENST00000638372 AP1B1Q10567 949 aa15.2■□□□□ 0.02
SCARB2-208ENST00000638372 SGSM1Q2NKQ1 1148 aa15.2■□□□□ 0.02
SCARB2-208ENST00000638372 KIAA0895Q8NCT3 520 aa15.2■□□□□ 0.02
SCARB2-208ENST00000638372 TTC25Q96NG3 672 aa15.2■□□□□ 0.02
SCARB2-208ENST00000638372 THAP2Q9H0W7 228 aa15.2■□□□□ 0.02
SCARB2-208ENST00000638372 EHD4Q9H223 541 aa15.2■□□□□ 0.02
SCARB2-208ENST00000638372 TBX20Q9UMR3 447 aa15.2■□□□□ 0.02
SCARB2-208ENST00000638372 CTSHP09668 335 aa15.2■□□□□ 0.02
SCARB2-208ENST00000638372 SLURP2P0DP57 97 aa15.2■□□□□ 0.02
SCARB2-208ENST00000638372 GUCY2CP25092 1073 aa15.2■□□□□ 0.02
SCARB2-208ENST00000638372 ELF1P32519 619 aa15.2■□□□□ 0.02
SCARB2-208ENST00000638372 E2F4Q16254 413 aa15.2■□□□□ 0.02
SCARB2-208ENST00000638372 MUM1L1Q5H9M0 696 aa15.2■□□□□ 0.02
SCARB2-208ENST00000638372 THEM5Q8N1Q8 247 aa15.2■□□□□ 0.02
SCARB2-208ENST00000638372 TRIM55Q9BYV6 548 aa15.2■□□□□ 0.02
SCARB2-208ENST00000638372 ACTR5Q9H9F9 607 aaPredicted RBP15.2■□□□□ 0.02
SCARB2-208ENST00000638372 IQCA1LA6NCM1 817 aa15.19■□□□□ 0.02
SCARB2-208ENST00000638372 CFLARO15519 480 aa15.19■□□□□ 0.02
SCARB2-208ENST00000638372 OPHN1O60890 802 aa15.19■□□□□ 0.02
SCARB2-208ENST00000638372 XPAP23025 273 aaPredicted RBP15.19■□□□□ 0.02
SCARB2-208ENST00000638372 EIF3EP60228 445 aaKnown RBP15.19■□□□□ 0.02
SCARB2-208ENST00000638372 EVX2Q03828 476 aa15.19■□□□□ 0.02
SCARB2-208ENST00000638372 DDR1Q08345 913 aa15.19■□□□□ 0.02
SCARB2-208ENST00000638372 NBPF12Q5TAG4 269 aaPredicted RBP15.19■□□□□ 0.02
SCARB2-208ENST00000638372 NLRP14Q86W24 1093 aa15.19■□□□□ 0.02
SCARB2-208ENST00000638372 FAM49BQ9NUQ9 324 aa15.19■□□□□ 0.02
SCARB2-208ENST00000638372 SLC1A1P43005 524 aa15.19■□□□□ 0.02
SCARB2-208ENST00000638372 TSPY1Q01534 308 aa15.19■□□□□ 0.02
SCARB2-208ENST00000638372 USP38Q8NB14 1042 aa15.19■□□□□ 0.02
SCARB2-208ENST00000638372 DDX56Q9NY93 547 aaKnown RBP15.19■□□□□ 0.02
SCARB2-208ENST00000638372 ARHGAP20Q9P2F6 1191 aa15.19■□□□□ 0.02
SCARB2-208ENST00000638372 C6orf222P0C671 652 aaPredicted RBP15.19■□□□□ 0.02
SCARB2-208ENST00000638372 EFCAB12Q6NXP0 572 aa15.19■□□□□ 0.02
SCARB2-208ENST00000638372 PNKPQ96T60 521 aa15.19■□□□□ 0.02
SCARB2-208ENST00000638372 KIF9Q9HAQ2 790 aa15.19■□□□□ 0.02
SCARB2-208ENST00000638372 ANGPTL3Q9Y5C1 460 aa15.19■□□□□ 0.02
SCARB2-208ENST00000638372 GOLGA8RI6L899 631 aa15.19■□□□□ 0.02
SCARB2-208ENST00000638372 ATG16L1Q676U5 607 aa15.19■□□□□ 0.02
SCARB2-208ENST00000638372 MOXD1Q6UVY6 613 aa15.19■□□□□ 0.02
SCARB2-208ENST00000638372 JAMLQ86YT9 394 aa15.19■□□□□ 0.02
SCARB2-208ENST00000638372 VPS39Q96JC1 886 aa15.19■□□□□ 0.02
SCARB2-208ENST00000638372 SENP7Q9BQF6 1050 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms