RNA–Protein interactions for RNA: ENST00000638009.1

CACNA1A-257, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,665 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-257ENST00000638009 CDO1Q16878 200 aa20.32■□□□□ 0.84
CACNA1A-257ENST00000638009 GADL1Q6ZQY3 521 aa20.32■□□□□ 0.84
CACNA1A-257ENST00000638009 ICA1Q05084 483 aa20.32■□□□□ 0.84
CACNA1A-257ENST00000638009 EFHC2Q5JST6 749 aa20.32■□□□□ 0.84
CACNA1A-257ENST00000638009 ARL6IP4Q66PJ3 421 aaKnown RBP20.32■□□□□ 0.84
CACNA1A-257ENST00000638009 TMA16Q96EY4 203 aaKnown RBP20.32■□□□□ 0.84
CACNA1A-257ENST00000638009 ALDH1A2O94788 518 aa20.32■□□□□ 0.84
CACNA1A-257ENST00000638009 MED26O95402 600 aa20.32■□□□□ 0.84
CACNA1A-257ENST00000638009 CTDSPL2Q05D32 466 aa20.32■□□□□ 0.84
CACNA1A-257ENST00000638009 ME3Q16798 604 aa20.32■□□□□ 0.84
CACNA1A-257ENST00000638009 AP1M1Q9BXS5 423 aa20.32■□□□□ 0.84
CACNA1A-257ENST00000638009 ARMC7Q9H6L4 198 aa20.32■□□□□ 0.84
CACNA1A-257ENST00000638009 RIC8BQ9NVN3 520 aa20.32■□□□□ 0.84
CACNA1A-257ENST00000638009 PCDHA7Q9UN72 937 aa20.32■□□□□ 0.84
CACNA1A-257ENST00000638009 IGF1RP08069 1367 aa20.32■□□□□ 0.84
CACNA1A-257ENST00000638009 TCP11X1B4DZS4 312 aa20.32■□□□□ 0.84
CACNA1A-257ENST00000638009 ATP5JP18859 108 aa20.32■□□□□ 0.84
CACNA1A-257ENST00000638009 ARHGDIBP52566 201 aa20.32■□□□□ 0.84
CACNA1A-257ENST00000638009 CATSPER2Q96P56 530 aa20.32■□□□□ 0.84
CACNA1A-257ENST00000638009 ANO4Q32M45 955 aa20.31■□□□□ 0.84
CACNA1A-257ENST00000638009 ZNF667Q5HYK9 610 aa20.31■□□□□ 0.84
CACNA1A-257ENST00000638009 AVENQ9NQS1 362 aaPredicted RBP20.31■□□□□ 0.84
CACNA1A-257ENST00000638009 STX11O75558 287 aa20.31■□□□□ 0.84
CACNA1A-257ENST00000638009 STX4Q12846 297 aa20.31■□□□□ 0.84
CACNA1A-257ENST00000638009 OR6B2Q6IFH4 312 aa20.31■□□□□ 0.84
CACNA1A-257ENST00000638009 EVPLQ92817 2033 aa20.31■□□□□ 0.84
CACNA1A-257ENST00000638009 PAGR1Q9BTK6 254 aa20.31■□□□□ 0.84
CACNA1A-257ENST00000638009 RANBP17Q9H2T7 1088 aaKnown RBP20.31■□□□□ 0.84
CACNA1A-257ENST00000638009 DNMBPQ6XZF7 1577 aa20.31■□□□□ 0.84
CACNA1A-257ENST00000638009 FTCDO95954 541 aa20.31■□□□□ 0.84
CACNA1A-257ENST00000638009 ANXA1P04083 346 aa20.31■□□□□ 0.84
CACNA1A-257ENST00000638009 CROCCP3Q8IVE0 287 aa20.31■□□□□ 0.84
CACNA1A-257ENST00000638009 CDH16O75309 829 aa20.31■□□□□ 0.84
CACNA1A-257ENST00000638009 SYTL3Q4VX76 610 aa20.31■□□□□ 0.84
CACNA1A-257ENST00000638009 OR8H2Q8N162 312 aa20.31■□□□□ 0.84
CACNA1A-257ENST00000638009 RNASE11Q8TAA1 199 aaKnown RBP20.31■□□□□ 0.84
CACNA1A-257ENST00000638009 S100A6P06703 90 aa20.31■□□□□ 0.84
CACNA1A-257ENST00000638009 TRIP13Q15645 432 aaPredicted RBP20.31■□□□□ 0.84
CACNA1A-257ENST00000638009 KLHL17Q6TDP4 642 aa20.31■□□□□ 0.84
CACNA1A-257ENST00000638009 UBXN6Q9BZV1 441 aa20.31■□□□□ 0.84
CACNA1A-257ENST00000638009 DNAJC12Q9UKB3 198 aa20.31■□□□□ 0.84
CACNA1A-257ENST00000638009 AATKQ6ZMQ8 1374 aa20.31■□□□□ 0.84
CACNA1A-257ENST00000638009 PSMD12O00232 456 aaPredicted RBP20.31■□□□□ 0.84
CACNA1A-257ENST00000638009 ATXN8OSP0DMR3 200 aa20.31■□□□□ 0.84
CACNA1A-257ENST00000638009 SLC16A1P53985 500 aa20.31■□□□□ 0.84
CACNA1A-257ENST00000638009 ALKBH5Q6P6C2 394 aaKnown RBP20.31■□□□□ 0.84
CACNA1A-257ENST00000638009 XPO1O14980 1071 aaKnown RBP20.31■□□□□ 0.84
CACNA1A-257ENST00000638009 SERPINB9P50453 376 aa20.31■□□□□ 0.84
CACNA1A-257ENST00000638009 STX5Q13190 355 aa20.31■□□□□ 0.84
CACNA1A-257ENST00000638009 CYP4Z2PQ8N1L4 340 aa20.31■□□□□ 0.84
CACNA1A-257ENST00000638009 CEP72Q9P209 647 aa20.31■□□□□ 0.84
CACNA1A-257ENST00000638009 DYNC1LI1Q9Y6G9 523 aaKnown RBP20.31■□□□□ 0.84
CACNA1A-257ENST00000638009 OSBPP22059 807 aa20.3■□□□□ 0.84
CACNA1A-257ENST00000638009 SLC39A14Q15043 492 aa20.3■□□□□ 0.84
CACNA1A-257ENST00000638009 ZNF699Q32M78 642 aa20.3■□□□□ 0.84
CACNA1A-257ENST00000638009 KIAA0408Q6ZU52 694 aa20.3■□□□□ 0.84
CACNA1A-257ENST00000638009 CYP4Z1Q86W10 505 aa20.3■□□□□ 0.84
CACNA1A-257ENST00000638009 VSTM4Q8IW00 320 aa20.3■□□□□ 0.84
CACNA1A-257ENST00000638009 CHAMP1Q96JM3 812 aa20.3■□□□□ 0.84
CACNA1A-257ENST00000638009 ABCB6Q9NP58 842 aa20.3■□□□□ 0.84
CACNA1A-257ENST00000638009 USP15Q9Y4E8 981 aaPredicted RBP20.3■□□□□ 0.84
CACNA1A-257ENST00000638009 IFT140Q96RY7 1462 aa20.3■□□□□ 0.84
CACNA1A-257ENST00000638009 ARL4DP49703 201 aa20.3■□□□□ 0.84
CACNA1A-257ENST00000638009 CNTN1Q12860 1018 aa20.3■□□□□ 0.84
CACNA1A-257ENST00000638009 TSNQ15631 228 aaKnown RBP20.3■□□□□ 0.84
CACNA1A-257ENST00000638009 RNFT2Q96EX2 444 aa20.3■□□□□ 0.84
CACNA1A-257ENST00000638009 SGSM3Q96HU1 749 aa20.3■□□□□ 0.84
CACNA1A-257ENST00000638009 BTBD18B2RXH4 712 aa20.3■□□□□ 0.84
CACNA1A-257ENST00000638009 WWP2O00308 870 aa20.3■□□□□ 0.84
CACNA1A-257ENST00000638009 FLT3P36888 993 aa20.3■□□□□ 0.84
CACNA1A-257ENST00000638009 CENPAP49450 140 aa20.3■□□□□ 0.84
CACNA1A-257ENST00000638009 MYO5CQ9NQX4 1742 aa20.3■□□□□ 0.84
CACNA1A-257ENST00000638009 JAK2O60674 1132 aa20.3■□□□□ 0.84
CACNA1A-257ENST00000638009 VHLP40337 213 aa20.3■□□□□ 0.84
CACNA1A-257ENST00000638009 ATP12AP54707 1039 aa20.3■□□□□ 0.84
CACNA1A-257ENST00000638009 TRIM25Q14258 630 aaKnown RBP20.3■□□□□ 0.84
CACNA1A-257ENST00000638009 EDRF1Q3B7T1 1238 aa20.3■□□□□ 0.84
CACNA1A-257ENST00000638009 GPIHBP1Q8IV16 184 aa20.3■□□□□ 0.84
CACNA1A-257ENST00000638009 PPM1NQ8N819 430 aa20.3■□□□□ 0.84
CACNA1A-257ENST00000638009 HDHD2Q9H0R4 259 aa20.3■□□□□ 0.84
CACNA1A-257ENST00000638009 CEP170P1Q96L14 293 aa20.3■□□□□ 0.84
CACNA1A-257ENST00000638009 A8MXQ7 604 aa20.3■□□□□ 0.84
CACNA1A-257ENST00000638009 SMAPO00193 183 aa20.3■□□□□ 0.84
CACNA1A-257ENST00000638009 KDSRQ06136 332 aa20.3■□□□□ 0.84
CACNA1A-257ENST00000638009 UGT3A1Q6NUS8 523 aa20.3■□□□□ 0.84
CACNA1A-257ENST00000638009 SULF1Q8IWU6 871 aa20.3■□□□□ 0.84
CACNA1A-257ENST00000638009 ENKURQ8TC29 256 aa20.3■□□□□ 0.84
CACNA1A-257ENST00000638009 ELMO2Q96JJ3 720 aa20.3■□□□□ 0.84
CACNA1A-257ENST00000638009 SLC9A2Q9UBY0 812 aa20.3■□□□□ 0.84
CACNA1A-257ENST00000638009 BMP10O95393 424 aa20.3■□□□□ 0.84
CACNA1A-257ENST00000638009 MYL2P10916 166 aa20.3■□□□□ 0.84
CACNA1A-257ENST00000638009 ANKRD13CQ8N6S4 541 aa20.3■□□□□ 0.84
CACNA1A-257ENST00000638009 FAR2Q96K12 515 aa20.3■□□□□ 0.84
CACNA1A-257ENST00000638009 CD209Q9NNX6 404 aa20.3■□□□□ 0.84
CACNA1A-257ENST00000638009 PNMA3Q9UL41 463 aa20.3■□□□□ 0.84
CACNA1A-257ENST00000638009 SYNJ1O43426 1573 aa20.29■□□□□ 0.84
CACNA1A-257ENST00000638009 CDC40O60508 579 aaKnown RBP eCLIP20.29■□□□□ 0.84
CACNA1A-257ENST00000638009 BYSLQ13895 437 aaKnown RBP20.29■□□□□ 0.84
CACNA1A-257ENST00000638009 TAF2Q6P1X5 1199 aa20.29■□□□□ 0.84
CACNA1A-257ENST00000638009 SPATA21Q7Z572 469 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms