RNA–Protein interactions for RNA: ENST00000636964.1

CLN6-217, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 3,335 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-217ENST00000636964 TTLL13PA6NNM8 815 aa12.38□□□□□ -0.43
CLN6-217ENST00000636964 EBAG9O00559 213 aa12.38□□□□□ -0.43
CLN6-217ENST00000636964 CXCR5P32302 372 aa12.38□□□□□ -0.43
CLN6-217ENST00000636964 IGBP1P78318 339 aa12.38□□□□□ -0.43
CLN6-217ENST00000636964 CETN1Q12798 172 aa12.38□□□□□ -0.43
CLN6-217ENST00000636964 CAPSQ13938 189 aa12.38□□□□□ -0.43
CLN6-217ENST00000636964 TTLL4Q14679 1199 aa12.38□□□□□ -0.43
CLN6-217ENST00000636964 SPRYD7Q5W111 196 aa12.38□□□□□ -0.43
CLN6-217ENST00000636964 ALKBH5Q6P6C2 394 aaKnown RBP12.38□□□□□ -0.43
CLN6-217ENST00000636964 GPD1LQ8N335 351 aa12.38□□□□□ -0.43
CLN6-217ENST00000636964 ARL10Q8N8L6 244 aa12.38□□□□□ -0.43
CLN6-217ENST00000636964 SHCBP1Q8NEM2 672 aa12.38□□□□□ -0.43
CLN6-217ENST00000636964 HAPLN2Q9GZV7 340 aa12.38□□□□□ -0.43
CLN6-217ENST00000636964 SEPT11Q9NVA2 429 aaKnown RBP12.38□□□□□ -0.43
CLN6-217ENST00000636964 MCM8Q9UJA3 840 aa12.38□□□□□ -0.43
CLN6-217ENST00000636964 PDE2AO00408 941 aaPredicted RBP12.38□□□□□ -0.43
CLN6-217ENST00000636964 CD151P48509 253 aa12.38□□□□□ -0.43
CLN6-217ENST00000636964 SNRPFP62306 86 aaKnown RBP12.38□□□□□ -0.43
CLN6-217ENST00000636964 TUBB2AQ13885 445 aa12.38□□□□□ -0.43
CLN6-217ENST00000636964 PTPROQ16827 1216 aa12.38□□□□□ -0.43
CLN6-217ENST00000636964 ZBTB41Q5SVQ8 909 aa12.38□□□□□ -0.43
CLN6-217ENST00000636964 CST9Q5W186 159 aa12.38□□□□□ -0.43
CLN6-217ENST00000636964 GLYCTKQ8IVS8 523 aa12.38□□□□□ -0.43
CLN6-217ENST00000636964 U2AF1L4Q8WU68 220 aaKnown RBP12.38□□□□□ -0.43
CLN6-217ENST00000636964 FAXDC2Q96IV6 333 aa12.38□□□□□ -0.43
CLN6-217ENST00000636964 TUBB2BQ9BVA1 445 aa12.38□□□□□ -0.43
CLN6-217ENST00000636964 NAGPAQ9UK23 515 aa12.38□□□□□ -0.43
CLN6-217ENST00000636964 ASB14A6NK59 587 aa12.37□□□□□ -0.43
CLN6-217ENST00000636964 DDX3XO00571 662 aaKnown RBP eCLIP12.37□□□□□ -0.43
CLN6-217ENST00000636964 PJA2O43164 708 aa12.37□□□□□ -0.43
CLN6-217ENST00000636964 NAMPTP43490 491 aa12.37□□□□□ -0.43
CLN6-217ENST00000636964 WNT7BP56706 349 aa12.37□□□□□ -0.43
CLN6-217ENST00000636964 CYP24A1Q07973 514 aa12.37□□□□□ -0.43
CLN6-217ENST00000636964 MKRN4PQ13434 485 aaPredicted RBP12.37□□□□□ -0.43
CLN6-217ENST00000636964 PLCB4Q15147 1175 aa12.37□□□□□ -0.43
CLN6-217ENST00000636964 EPC2Q52LR7 807 aa12.37□□□□□ -0.43
CLN6-217ENST00000636964 DPP9Q86TI2 863 aa12.37□□□□□ -0.43
CLN6-217ENST00000636964 PPM1KQ8N3J5 372 aa12.37□□□□□ -0.43
CLN6-217ENST00000636964 TRIM58Q8NG06 486 aa12.37□□□□□ -0.43
CLN6-217ENST00000636964 FAM76AQ8TAV0 307 aa12.37□□□□□ -0.43
CLN6-217ENST00000636964 CXorf38Q8TB03 319 aa12.37□□□□□ -0.43
CLN6-217ENST00000636964 PI4K2AQ9BTU6 479 aa12.37□□□□□ -0.43
CLN6-217ENST00000636964 RNPEPQ9H4A4 650 aa12.37□□□□□ -0.43
CLN6-217ENST00000636964 ACP6Q9NPH0 428 aa12.37□□□□□ -0.43
CLN6-217ENST00000636964 BZW2Q9Y6E2 419 aaKnown RBP12.37□□□□□ -0.43
CLN6-217ENST00000636964 PPFIA2O75334 1257 aa12.37□□□□□ -0.43
CLN6-217ENST00000636964 MAFO75444 373 aaPredicted RBP12.37□□□□□ -0.43
CLN6-217ENST00000636964 FERP16591 822 aa12.37□□□□□ -0.43
CLN6-217ENST00000636964 ADCYAP1R1P41586 468 aa12.37□□□□□ -0.43
CLN6-217ENST00000636964 PRKCIP41743 596 aa12.37□□□□□ -0.43
CLN6-217ENST00000636964 NLRP11P59045 1033 aaKnown RBP12.37□□□□□ -0.43
CLN6-217ENST00000636964 GNGT1P63211 74 aa12.37□□□□□ -0.43
CLN6-217ENST00000636964 ZNF792Q3KQV3 632 aa12.37□□□□□ -0.43
CLN6-217ENST00000636964 METTL13Q8N6R0 699 aa12.37□□□□□ -0.43
CLN6-217ENST00000636964 TAS1R2Q8TE23 839 aa12.37□□□□□ -0.43
CLN6-217ENST00000636964 SCFD2Q8WU76 684 aa12.37□□□□□ -0.43
CLN6-217ENST00000636964 ARPC5LQ9BPX5 153 aa12.37□□□□□ -0.43
CLN6-217ENST00000636964 CAPS2Q9BXY5 557 aa12.37□□□□□ -0.43
CLN6-217ENST00000636964 ACBD3Q9H3P7 528 aa12.37□□□□□ -0.43
CLN6-217ENST00000636964 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.37□□□□□ -0.43
CLN6-217ENST00000636964 ZBTB42B2RXF5 422 aa12.37□□□□□ -0.43
CLN6-217ENST00000636964 RFC5P40937 340 aa12.37□□□□□ -0.43
CLN6-217ENST00000636964 TTMPQ5BVD1 217 aa12.37□□□□□ -0.43
CLN6-217ENST00000636964 PAPD7Q5XG87 772 aaKnown RBP12.37□□□□□ -0.43
CLN6-217ENST00000636964 LNX1Q8TBB1 728 aaPredicted RBP12.37□□□□□ -0.43
CLN6-217ENST00000636964 TMEM174Q8WUU8 243 aa12.37□□□□□ -0.43
CLN6-217ENST00000636964 NOX5Q96PH1 765 aa12.37□□□□□ -0.43
CLN6-217ENST00000636964 PPP1R16BQ96T49 567 aa12.37□□□□□ -0.43
CLN6-217ENST00000636964 GOLPH3Q9H4A6 298 aa12.37□□□□□ -0.43
CLN6-217ENST00000636964 LRRC37A2A6NM11 1700 aa12.36□□□□□ -0.43
CLN6-217ENST00000636964 ZNF233A6NK53 670 aa12.36□□□□□ -0.43
CLN6-217ENST00000636964 FTCDO95954 541 aa12.36□□□□□ -0.43
CLN6-217ENST00000636964 HUNKP57058 714 aa12.36□□□□□ -0.43
CLN6-217ENST00000636964 KRT39Q6A163 491 aa12.36□□□□□ -0.43
CLN6-217ENST00000636964 TAPT1Q6NXT6 567 aa12.36□□□□□ -0.43
CLN6-217ENST00000636964 SV2AQ7L0J3 742 aa12.36□□□□□ -0.43
CLN6-217ENST00000636964 GPR142Q7Z601 462 aa12.36□□□□□ -0.43
CLN6-217ENST00000636964 ZBTB33Q86T24 672 aa12.36□□□□□ -0.43
CLN6-217ENST00000636964 RHPN2Q8IUC4 686 aa12.36□□□□□ -0.43
CLN6-217ENST00000636964 RNF149Q8NC42 400 aa12.36□□□□□ -0.43
CLN6-217ENST00000636964 ATP8B4Q8TF62 1192 aa12.36□□□□□ -0.43
CLN6-217ENST00000636964 MFSD14AQ96MC6 490 aa12.36□□□□□ -0.43
CLN6-217ENST00000636964 FBXL18Q96ME1 805 aa12.36□□□□□ -0.43
CLN6-217ENST00000636964 FAM107BQ9H098 131 aa12.36□□□□□ -0.43
CLN6-217ENST00000636964 LUC7LQ9NQ29 371 aaKnown RBP12.36□□□□□ -0.43
CLN6-217ENST00000636964 CPA4Q9UI42 421 aa12.36□□□□□ -0.43
CLN6-217ENST00000636964 AGO2Q9UKV8 859 aaKnown RBP12.36□□□□□ -0.43
CLN6-217ENST00000636964 PACSIN2Q9UNF0 486 aaPredicted RBP12.36□□□□□ -0.43
CLN6-217ENST00000636964 MAPK13O15264 365 aa12.36□□□□□ -0.43
CLN6-217ENST00000636964 PALMO75781 387 aa12.36□□□□□ -0.43
CLN6-217ENST00000636964 GARTP22102 1010 aa12.36□□□□□ -0.43
CLN6-217ENST00000636964 TUBB4BP68371 445 aa12.36□□□□□ -0.43
CLN6-217ENST00000636964 ADCY2Q08462 1091 aa12.36□□□□□ -0.43
CLN6-217ENST00000636964 PPFIA1Q13136 1202 aa12.36□□□□□ -0.43
CLN6-217ENST00000636964 NAB2Q15742 525 aa12.36□□□□□ -0.43
CLN6-217ENST00000636964 NFRKBQ6P4R8 1299 aa12.36□□□□□ -0.43
CLN6-217ENST00000636964 CCNI2Q6ZMN8 369 aaPredicted RBP12.36□□□□□ -0.43
CLN6-217ENST00000636964 PALB2Q86YC2 1186 aa12.36□□□□□ -0.43
CLN6-217ENST00000636964 MORC4Q8TE76 937 aa12.36□□□□□ -0.43
CLN6-217ENST00000636964 HDAC7Q8WUI4 952 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms