RNA–Protein interactions for RNA: ENST00000636780.1

CLN5-216, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 5

Gene CLN5, Length 2,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-216ENST00000636780 SSC5DA1L4H1 1573 aa20.26■□□□□ 0.83
CLN5-216ENST00000636780 SYNGAP1Q96PV0 1343 aa20.26■□□□□ 0.83
CLN5-216ENST00000636780 SRGAP2CP0DJJ0 459 aa20.26■□□□□ 0.83
CLN5-216ENST00000636780 GPC3P51654 580 aa20.26■□□□□ 0.83
CLN5-216ENST00000636780 CALR3Q96L12 384 aaKnown RBP20.26■□□□□ 0.83
CLN5-216ENST00000636780 KLHL11Q9NVR0 708 aa20.26■□□□□ 0.83
CLN5-216ENST00000636780 GPRC5DQ9NZD1 345 aa20.26■□□□□ 0.83
CLN5-216ENST00000636780 RRP15Q9Y3B9 282 aaKnown RBP20.26■□□□□ 0.83
CLN5-216ENST00000636780 VNN1O95497 513 aa20.25■□□□□ 0.83
CLN5-216ENST00000636780 HLA-DRAP01903 254 aa20.25■□□□□ 0.83
CLN5-216ENST00000636780 CDR2Q01850 454 aa20.25■□□□□ 0.83
CLN5-216ENST00000636780 WDR78Q5VTH9 848 aa20.25■□□□□ 0.83
CLN5-216ENST00000636780 JAMLQ86YT9 394 aa20.25■□□□□ 0.83
CLN5-216ENST00000636780 CCDC26Q8TAB7 109 aa20.25■□□□□ 0.83
CLN5-216ENST00000636780 FNBP1Q96RU3 617 aa20.25■□□□□ 0.83
CLN5-216ENST00000636780 MAP3K20Q9NYL2 800 aaKnown RBP20.25■□□□□ 0.83
CLN5-216ENST00000636780 ARHGAP28Q9P2N2 729 aa20.25■□□□□ 0.83
CLN5-216ENST00000636780 ANAPC7Q9UJX3 599 aa20.25■□□□□ 0.83
CLN5-216ENST00000636780 RLFQ13129 1914 aa20.25■□□□□ 0.83
CLN5-216ENST00000636780 K7ERI5 159 aa20.25■□□□□ 0.83
CLN5-216ENST00000636780 CST3P01034 146 aaPredicted RBP20.25■□□□□ 0.83
CLN5-216ENST00000636780 RARAP10276 462 aa20.25■□□□□ 0.83
CLN5-216ENST00000636780 PTENP60484 403 aa20.25■□□□□ 0.83
CLN5-216ENST00000636780 TMC3Q7Z5M5 1100 aa20.25■□□□□ 0.83
CLN5-216ENST00000636780 RHOT2Q8IXI1 618 aa20.25■□□□□ 0.83
CLN5-216ENST00000636780 SAMD3Q8N6K7 520 aa20.25■□□□□ 0.83
CLN5-216ENST00000636780 OTUD5Q96G74 571 aa20.25■□□□□ 0.83
CLN5-216ENST00000636780 FBXL18Q96ME1 805 aa20.25■□□□□ 0.83
CLN5-216ENST00000636780 PWWP2AQ96N64 755 aa20.25■□□□□ 0.83
CLN5-216ENST00000636780 MTFR1LQ9H019 292 aa20.25■□□□□ 0.83
CLN5-216ENST00000636780 CARD9Q9H257 536 aa20.25■□□□□ 0.83
CLN5-216ENST00000636780 ELP3Q9H9T3 547 aa20.25■□□□□ 0.83
CLN5-216ENST00000636780 AGO2Q9UKV8 859 aaKnown RBP20.25■□□□□ 0.83
CLN5-216ENST00000636780 DAAM1Q9Y4D1 1078 aa20.25■□□□□ 0.83
CLN5-216ENST00000636780 TLDC2A0PJX2 215 aa20.24■□□□□ 0.83
CLN5-216ENST00000636780 SOWAHBA6NEL2 793 aa20.24■□□□□ 0.83
CLN5-216ENST00000636780 FOXO6A8MYZ6 492 aa20.24■□□□□ 0.83
CLN5-216ENST00000636780 CCDC188H7C350 402 aa20.24■□□□□ 0.83
CLN5-216ENST00000636780 ARIH2O95376 493 aa20.24■□□□□ 0.83
CLN5-216ENST00000636780 UBA1P22314 1058 aaKnown RBP20.24■□□□□ 0.83
CLN5-216ENST00000636780 VPS41P49754 854 aa20.24■□□□□ 0.83
CLN5-216ENST00000636780 STXBP2Q15833 593 aa20.24■□□□□ 0.83
CLN5-216ENST00000636780 MIS18BP1Q6P0N0 1132 aa20.24■□□□□ 0.83
CLN5-216ENST00000636780 TMEM270Q6UE05 265 aa20.24■□□□□ 0.83
CLN5-216ENST00000636780 TEX2Q8IWB9 1127 aa20.24■□□□□ 0.83
CLN5-216ENST00000636780 COPS5Q92905 334 aa20.24■□□□□ 0.83
CLN5-216ENST00000636780 IWS1Q96ST2 819 aa20.24■□□□□ 0.83
CLN5-216ENST00000636780 SNCAIPQ9Y6H5 919 aa20.24■□□□□ 0.83
CLN5-216ENST00000636780 IRF6O14896 467 aa20.24■□□□□ 0.83
CLN5-216ENST00000636780 P4HA2O15460 535 aa20.24■□□□□ 0.83
CLN5-216ENST00000636780 PIK3CAP42336 1068 aa20.24■□□□□ 0.83
CLN5-216ENST00000636780 RPL21P46778 160 aaKnown RBP20.24■□□□□ 0.83
CLN5-216ENST00000636780 PAXIP1Q6ZW49 1069 aaPredicted RBP20.24■□□□□ 0.83
CLN5-216ENST00000636780 COQ4Q9Y3A0 265 aa20.24■□□□□ 0.83
CLN5-216ENST00000636780 GSTTP1A0A1W2PQM5 241 aa20.23■□□□□ 0.83
CLN5-216ENST00000636780 MYO1CO00159 1063 aa20.23■□□□□ 0.83
CLN5-216ENST00000636780 NR1D1P20393 614 aa20.23■□□□□ 0.83
CLN5-216ENST00000636780 IRX5P78411 483 aaPredicted RBP20.23■□□□□ 0.83
CLN5-216ENST00000636780 XKR3Q5GH77 459 aa20.23■□□□□ 0.83
CLN5-216ENST00000636780 CCDC137Q6PK04 289 aaKnown RBP20.23■□□□□ 0.83
CLN5-216ENST00000636780 MDM1Q8TC05 714 aa20.23■□□□□ 0.83
CLN5-216ENST00000636780 SPIRE2Q8WWL2 714 aa20.23■□□□□ 0.83
CLN5-216ENST00000636780 C11orf70Q9BRQ4 267 aa20.23■□□□□ 0.83
CLN5-216ENST00000636780 NOVA2Q9UNW9 492 aaKnown RBP20.23■□□□□ 0.83
CLN5-216ENST00000636780 USTQ9Y2C2 406 aa20.23■□□□□ 0.83
CLN5-216ENST00000636780 CD58P19256 250 aa20.23■□□□□ 0.83
CLN5-216ENST00000636780 SLCO1A2P46721 670 aa20.23■□□□□ 0.83
CLN5-216ENST00000636780 GJC2Q5T442 439 aaPredicted RBP20.23■□□□□ 0.83
CLN5-216ENST00000636780 CCDC25Q86WR0 208 aa20.23■□□□□ 0.83
CLN5-216ENST00000636780 DEPTORQ8TB45 409 aa20.23■□□□□ 0.83
CLN5-216ENST00000636780 RUBCNQ92622 972 aa20.23■□□□□ 0.83
CLN5-216ENST00000636780 ATP6V1G3Q96LB4 118 aa20.23■□□□□ 0.83
CLN5-216ENST00000636780 ERP44Q9BS26 406 aa20.23■□□□□ 0.83
CLN5-216ENST00000636780 TCHPQ9BT92 498 aa20.23■□□□□ 0.83
CLN5-216ENST00000636780 PPANQ9NQ55 473 aaKnown RBP20.23■□□□□ 0.83
CLN5-216ENST00000636780 HOXC10Q9NYD6 342 aa20.23■□□□□ 0.83
CLN5-216ENST00000636780 RBAKQ9NYW8 714 aaPredicted RBP20.23■□□□□ 0.83
CLN5-216ENST00000636780 CD2APQ9Y5K6 639 aa20.23■□□□□ 0.83
CLN5-216ENST00000636780 OATP04181 439 aa20.22■□□□□ 0.83
CLN5-216ENST00000636780 SCP2P22307 547 aa20.22■□□□□ 0.83
CLN5-216ENST00000636780 CUL1Q13616 776 aa20.22■□□□□ 0.83
CLN5-216ENST00000636780 HSDL1Q3SXM5 330 aa20.22■□□□□ 0.83
CLN5-216ENST00000636780 GNPTABQ3T906 1256 aa20.22■□□□□ 0.83
CLN5-216ENST00000636780 ATP13A4Q4VNC1 1196 aa20.22■□□□□ 0.83
CLN5-216ENST00000636780 BRDTQ58F21 947 aaPredicted RBP20.22■□□□□ 0.83
CLN5-216ENST00000636780 ANKS1BQ7Z6G8 1248 aa20.22■□□□□ 0.83
CLN5-216ENST00000636780 SRLQ86TD4 932 aa20.22■□□□□ 0.83
CLN5-216ENST00000636780 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.22■□□□□ 0.83
CLN5-216ENST00000636780 PPP1R13LQ8WUF5 828 aa20.22■□□□□ 0.83
CLN5-216ENST00000636780 ACSF2Q96CM8 615 aaPredicted RBP20.22■□□□□ 0.83
CLN5-216ENST00000636780 SENP7Q9BQF6 1050 aa20.22■□□□□ 0.83
CLN5-216ENST00000636780 MSTO1Q9BUK6 570 aa20.22■□□□□ 0.83
CLN5-216ENST00000636780 NUB1Q9Y5A7 615 aa20.22■□□□□ 0.83
CLN5-216ENST00000636780 SHOX2O60902 331 aaPredicted RBP20.22■□□□□ 0.83
CLN5-216ENST00000636780 TCF4P15884 667 aa20.22■□□□□ 0.83
CLN5-216ENST00000636780 FGFR4P22455 802 aa20.22■□□□□ 0.83
CLN5-216ENST00000636780 SSR1P43307 286 aaKnown RBP20.22■□□□□ 0.83
CLN5-216ENST00000636780 Q3C1V9 767 aa20.22■□□□□ 0.83
CLN5-216ENST00000636780 ZDHHC24Q6UX98 284 aa20.22■□□□□ 0.83
CLN5-216ENST00000636780 CCDC105Q8IYK2 499 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms