RNA–Protein interactions for RNA: ENST00000636238.1

CIITA-214, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5

Gene CIITA, Length 498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-214ENST00000636238 SLC7A3Q8WY07 619 aa8.19□□□□□ -1.1
CIITA-214ENST00000636238 DNASE1L2Q92874 299 aa8.19□□□□□ -1.1
CIITA-214ENST00000636238 LPPQ93052 612 aa8.19□□□□□ -1.1
CIITA-214ENST00000636238 FDXACB1Q9BRP7 624 aaPredicted RBP8.19□□□□□ -1.1
CIITA-214ENST00000636238 GBP3Q9H0R5 595 aa8.19□□□□□ -1.1
CIITA-214ENST00000636238 GOLPH3LQ9H4A5 285 aa8.19□□□□□ -1.1
CIITA-214ENST00000636238 LTB4R2Q9NPC1 389 aa8.19□□□□□ -1.1
CIITA-214ENST00000636238 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.19□□□□□ -1.1
CIITA-214ENST00000636238 MARCH5Q9NX47 278 aa8.19□□□□□ -1.1
CIITA-214ENST00000636238 RAB23Q9ULC3 237 aa8.19□□□□□ -1.1
CIITA-214ENST00000636238 USP24Q9UPU5 2620 aa8.19□□□□□ -1.1
CIITA-214ENST00000636238 ZFHX4Q86UP3 3567 aa8.19□□□□□ -1.1
CIITA-214ENST00000636238 SPTBN2O15020 2390 aa8.19□□□□□ -1.1
CIITA-214ENST00000636238 A0A1B0GVL5 298 aa8.18□□□□□ -1.1
CIITA-214ENST00000636238 POTEMA6NI47 508 aa8.18□□□□□ -1.1
CIITA-214ENST00000636238 MAN2B1O00754 1011 aa8.18□□□□□ -1.1
CIITA-214ENST00000636238 MSH4O15457 936 aa8.18□□□□□ -1.1
CIITA-214ENST00000636238 TGM5O43548 720 aa8.18□□□□□ -1.1
CIITA-214ENST00000636238 ECI2O75521 394 aa8.18□□□□□ -1.1
CIITA-214ENST00000636238 PSMD10O75832 226 aa8.18□□□□□ -1.1
CIITA-214ENST00000636238 RETP07949 1114 aa8.18□□□□□ -1.1
CIITA-214ENST00000636238 FGFR4P22455 802 aa8.18□□□□□ -1.1
CIITA-214ENST00000636238 TGM1P22735 817 aa8.18□□□□□ -1.1
CIITA-214ENST00000636238 CNR2P34972 360 aa8.18□□□□□ -1.1
CIITA-214ENST00000636238 MLLT6P55198 1093 aaPredicted RBP8.18□□□□□ -1.1
CIITA-214ENST00000636238 GPC5P78333 572 aa8.18□□□□□ -1.1
CIITA-214ENST00000636238 CSTF1Q05048 431 aaKnown RBP8.18□□□□□ -1.1
CIITA-214ENST00000636238 ELAVL2Q12926 359 aaKnown RBP8.18□□□□□ -1.1
CIITA-214ENST00000636238 PTGDRQ13258 359 aa8.18□□□□□ -1.1
CIITA-214ENST00000636238 ZSCAN23Q3MJ62 389 aa8.18□□□□□ -1.1
CIITA-214ENST00000636238 Q4G0T1 1027 aa8.18□□□□□ -1.1
CIITA-214ENST00000636238 AXDND1Q5T1B0 1012 aaPredicted RBP8.18□□□□□ -1.1
CIITA-214ENST00000636238 LIN9Q5TKA1 542 aa8.18□□□□□ -1.1
CIITA-214ENST00000636238 LRCH2Q5VUJ6 765 aa8.18□□□□□ -1.1
CIITA-214ENST00000636238 ADALQ6DHV7 355 aa8.18□□□□□ -1.1
CIITA-214ENST00000636238 C1orf228Q6PIY5 440 aa8.18□□□□□ -1.1
CIITA-214ENST00000636238 POTEGQ6S5H5 508 aa8.18□□□□□ -1.1
CIITA-214ENST00000636238 B3GNT9Q6UX72 402 aa8.18□□□□□ -1.1
CIITA-214ENST00000636238 ZNF852Q6ZMS4 543 aa8.18□□□□□ -1.1
CIITA-214ENST00000636238 GET4Q7L5D6 327 aaPredicted RBP8.18□□□□□ -1.1
CIITA-214ENST00000636238 RHPN2Q8IUC4 686 aa8.18□□□□□ -1.1
CIITA-214ENST00000636238 TBCKQ8TEA7 893 aa8.18□□□□□ -1.1
CIITA-214ENST00000636238 TCP11Q8WWU5 503 aa8.18□□□□□ -1.1
CIITA-214ENST00000636238 PSPC1Q8WXF1 523 aaKnown RBP8.18□□□□□ -1.1
CIITA-214ENST00000636238 FOXQ1Q9C009 403 aa8.18□□□□□ -1.1
CIITA-214ENST00000636238 IFT122Q9HBG6 1241 aa8.18□□□□□ -1.1
CIITA-214ENST00000636238 AVENQ9NQS1 362 aaPredicted RBP8.18□□□□□ -1.1
CIITA-214ENST00000636238 GDE1Q9NZC3 331 aa8.18□□□□□ -1.1
CIITA-214ENST00000636238 SEPT9Q9UHD8 586 aaPredicted RBP8.18□□□□□ -1.1
CIITA-214ENST00000636238 FBXO2Q9UK22 296 aaPredicted RBP8.18□□□□□ -1.1
CIITA-214ENST00000636238 FBXW11Q9UKB1 542 aa8.18□□□□□ -1.1
CIITA-214ENST00000636238 GIT1Q9Y2X7 761 aa8.18□□□□□ -1.1
CIITA-214ENST00000636238 COL4A3BPQ9Y5P4 624 aa8.18□□□□□ -1.1
CIITA-214ENST00000636238 CEP295Q9C0D2 2601 aa8.18□□□□□ -1.1
CIITA-214ENST00000636238 DOCK5Q9H7D0 1870 aa8.17□□□□□ -1.1
CIITA-214ENST00000636238 CACNA1GO43497 2377 aa8.17□□□□□ -1.1
CIITA-214ENST00000636238 FAM208BQ5VWN6 2430 aa8.17□□□□□ -1.1
CIITA-214ENST00000636238 CYP3A7-CYP3A51PA0A087WV96 503 aa8.17□□□□□ -1.1
CIITA-214ENST00000636238 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.17□□□□□ -1.1
CIITA-214ENST00000636238 FAM170BA6NMN3 283 aa8.17□□□□□ -1.1
CIITA-214ENST00000636238 EDIL3O43854 480 aa8.17□□□□□ -1.1
CIITA-214ENST00000636238 B4GALT3O60512 393 aa8.17□□□□□ -1.1
CIITA-214ENST00000636238 CUTAO60888 179 aa8.17□□□□□ -1.1
CIITA-214ENST00000636238 PPP6R2O75170 966 aa8.17□□□□□ -1.1
CIITA-214ENST00000636238 RFPL2O75678 378 aa8.17□□□□□ -1.1
CIITA-214ENST00000636238 STBD1O95210 358 aa8.17□□□□□ -1.1
CIITA-214ENST00000636238 SSBP05455 408 aaKnown RBP eCLIP8.17□□□□□ -1.1
CIITA-214ENST00000636238 ITGA4P13612 1032 aa8.17□□□□□ -1.1
CIITA-214ENST00000636238 CYP3A7P24462 503 aa8.17□□□□□ -1.1
CIITA-214ENST00000636238 HOXA11P31270 313 aaPredicted RBP8.17□□□□□ -1.1
CIITA-214ENST00000636238 OR1G1P47890 313 aa8.17□□□□□ -1.1
CIITA-214ENST00000636238 TRAPPC10P48553 1259 aa8.17□□□□□ -1.1
CIITA-214ENST00000636238 PSMC5P62195 406 aa8.17□□□□□ -1.1
CIITA-214ENST00000636238 SHC2P98077 582 aa8.17□□□□□ -1.1
CIITA-214ENST00000636238 ADCY1Q08828 1119 aa8.17□□□□□ -1.1
CIITA-214ENST00000636238 CAMK4Q16566 473 aa8.17□□□□□ -1.1
CIITA-214ENST00000636238 MTERF2Q49AM1 385 aa8.17□□□□□ -1.1
CIITA-214ENST00000636238 UBXN11Q5T124 520 aa8.17□□□□□ -1.1
CIITA-214ENST00000636238 CCDC183Q5T5S1 534 aa8.17□□□□□ -1.1
CIITA-214ENST00000636238 NOTUMQ6P988 496 aa8.17□□□□□ -1.1
CIITA-214ENST00000636238 CCDC73Q6ZRK6 1079 aa8.17□□□□□ -1.1
CIITA-214ENST00000636238 MIER3Q7Z3K6 550 aa8.17□□□□□ -1.1
CIITA-214ENST00000636238 IFNLR1Q8IU57 520 aaPredicted RBP8.17□□□□□ -1.1
CIITA-214ENST00000636238 C4orf32Q8N8J7 132 aa8.17□□□□□ -1.1
CIITA-214ENST00000636238 KRI1Q8N9T8 703 aaKnown RBP8.17□□□□□ -1.1
CIITA-214ENST00000636238 PIK3R5Q8WYR1 880 aa8.17□□□□□ -1.1
CIITA-214ENST00000636238 MSANTD3Q96H12 275 aa8.17□□□□□ -1.1
CIITA-214ENST00000636238 NFKBIZQ9BYH8 718 aa8.17□□□□□ -1.1
CIITA-214ENST00000636238 UNC45AQ9H3U1 944 aa8.17□□□□□ -1.1
CIITA-214ENST00000636238 TRPV5Q9NQA5 729 aa8.17□□□□□ -1.1
CIITA-214ENST00000636238 USP18Q9UMW8 372 aa8.17□□□□□ -1.1
CIITA-214ENST00000636238 SF3B1O75533 1304 aaKnown RBP eCLIP8.17□□□□□ -1.1
CIITA-214ENST00000636238 WDR81Q562E7 1941 aa8.17□□□□□ -1.1
CIITA-214ENST00000636238 A0A1W2PQ27 194 aa8.16□□□□□ -1.1
CIITA-214ENST00000636238 A0A1W2PQ64 194 aa8.16□□□□□ -1.1
CIITA-214ENST00000636238 A0A1W2PQD8 194 aa8.16□□□□□ -1.1
CIITA-214ENST00000636238 SYCE3A1L190 88 aa8.16□□□□□ -1.1
CIITA-214ENST00000636238 ARL5CA6NH57 179 aa8.16□□□□□ -1.1
CIITA-214ENST00000636238 MEIS3P2A8K0S8 358 aa8.16□□□□□ -1.1
CIITA-214ENST00000636238 C2CD2LO14523 706 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms